LOCUS       NM_026620               1861 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 98, member B (Fam98b),
            mRNA.
ACCESSION   NM_026620 XM_001002799
VERSION     NM_026620.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Liao,X., Ruan,X., Yao,P., Yang,D., Wu,X., Zhou,X., Jing,J., Wei,D.,
            Liang,Y., Zhang,T., Qin,S. and Jiang,H.
  TITLE     LncRNA-Gm9866 promotes liver fibrosis by activating TGFbeta/Smad
            signaling via targeting Fam98b
  JOURNAL   J Transl Med 21 (1), 778 (2023)
   PUBMED   37919785
  REMARK    GeneRIF: LncRNA-Gm9866 promotes liver fibrosis by activating
            TGFbeta/Smad signaling via targeting Fam98b.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Sansom,S.N., Griffiths,D.S., Faedo,A., Kleinjan,D.J., Ruan,Y.,
            Smith,J., van Heyningen,V., Rubenstein,J.L. and Livesey,F.J.
  TITLE     The level of the transcription factor Pax6 is essential for
            controlling the balance between neural stem cell self-renewal and
            neurogenesis
  JOURNAL   PLoS Genet 5 (6), e1000511 (2009)
   PUBMED   19521500
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK019190.1 and AL928959.9.
            
            On or before May 4, 2006 this sequence version replaced
            XM_001002799.1, NM_026620.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no full-length transcript from the
            C57BL/6J reference strain was available. The extent of this
            transcript is supported by its existence in a single strain,
            FVB/N-3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048087.1, SRR7345562.3143768.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-381               AK019190.1         2-382
            382-560             AL928959.9         93571-93749
            561-641             AL928959.9         96235-96315
            642-758             AL928959.9         97219-97335
            759-926             AL928959.9         101176-101343
            927-1861            AL928959.9         104002-104936
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 59.15 cM"
     gene            1..1861
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /note="family with sequence similarity 98, member B"
                     /db_xref="GeneID:68215"
                     /db_xref="MGI:MGI:1915465"
     exon            1..100
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..1319
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /codon_start=1
                     /product="protein FAM98B"
                     /protein_id="NP_080896.2"
                     /db_xref="CCDS:CCDS16571.1"
                     /db_xref="GeneID:68215"
                     /db_xref="MGI:MGI:1915465"
                     /translation="MRGPELGPETSMEGDVLDTLEALGYKGPLLEEQALSKAAEGGLS
                     SPEFSELCIWLGSQIKSLCNLEESITSAGRDDLESFQLEISGFLKEMACPYSVLVSGD
                     IKERLTKKDDCLKLLLFLSTELQALQILQKKKHKNSQLDKNSEICQEVQAVCDALGVP
                     KSDTSDIPLLLSQVESKVKDILCRVQKNHVGKPLLKVDLSSEQAEKLERINDALSCEY
                     ECRRRMLMKRLDVTVQSFGWSDRAKAKTDNIARIYQPKRYALSPKTTVTLAHLLAARE
                     DLSKIIRTSSGISREKTACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQEGGGR
                     GGWGGGGGGRGGGGGGRGGWGGGGGWGGGGGSGGGWGGSGGGGGGRGGFQGRGDYGGR
                     GDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGYRRY"
     exon            101..246
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            247..381
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            382..560
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            561..641
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            642..758
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            759..926
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1861
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1835..1840
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1861
                     /gene="Fam98b"
                     /gene_synonym="2610510H03Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtgacgaac agctttggac caagcgacca tgagagggcc agagctcggg cccgaaacca
       61 gcatggaagg ggacgttctg gacaccttgg aggcgctggg gtataagggg ccactgttag
      121 aggaacaggc actctccaag gcagcagagg gtggactgtc ttcacctgag ttttcagagc
      181 tctgcatttg gttaggctcc cagataaagt ccttatgcaa cctggaagaa agcatcactt
      241 cagctgggag agatgaccta gagagcttcc agcttgagat aagtgggttt ttaaaagaga
      301 tggcctgtcc atactcggta ctcgtctcag gagacattaa agagcgcctc acaaagaagg
      361 atgactgctt gaaacttctg ttgtttttaa gtacagaact tcaagcttta caaatattac
      421 agaagaaaaa acataaaaat tctcagttag ataaaaatag tgaaatttgc caggaagttc
      481 aagctgtatg tgatgccctc ggggtcccca agtctgacac ttcagacatt ccacttctgc
      541 tgagccaagt ggagtcaaag gtgaaggata ttctctgtag agtccagaaa aaccatgtgg
      601 gaaagccatt gctaaaggtt gatttaagtt ctgaacaggc agaaaaactg gaaagaatta
      661 atgatgctct ttcctgtgaa tatgagtgtc gccgacggat gttaatgaaa cgattggatg
      721 tgacagtgca gtcctttgga tggtccgata gagcaaaggc aaaaacagat aacatagcaa
      781 gaatttacca gcccaagcgt tatgctctgt cgcccaagac aacagtcaca ttggcacatc
      841 tgcttgccgc ccgtgaagat ctgtccaaga tcatcaggac aagcagcggt atcagccggg
      901 agaagactgc gtgcgccatt aataaggtgc ttatgggacg ggtgcctgac aggggaggac
      961 ggccgaatga aattgaacca ccaccccctg aaatgccccc ttggcagaag agacaagaag
     1021 gcggagggag gggtggttgg ggtggtggag gtggtggtag aggaggtggt gggggtggaa
     1081 gaggtggatg gggtggtggg ggagggtggg gagggggagg aggaagtgga ggagggtggg
     1141 gaggaagtgg tgggggaggg ggtggccgag gaggtttcca aggcaggggc gattatggtg
     1201 ggaggggaga ttatggtgga agagggggct atggtgggag agggggctat ggtgggagag
     1261 gttatggaga tccatatgga ggaggaggtg gtggtggtgg tgggtataga agatattaaa
     1321 gactgcagat gttagagagc actgcttctt actagatacg gtagatatag tgttctgagg
     1381 agcatacttg aacatccccc tgaggtagat cgtgtcagtg ccctgaggaa ggcatcctga
     1441 atacagaagg cccttttatg ccaccggttg atgatcctgc aacgcgactc tttccatagt
     1501 ctgggtacta aagcatgctg cgtctttttc aaaagcaaaa acacaaaacc tatttttaga
     1561 aatgtaaata tttattacca gcaacttgga aaatggaatg tattttattg tcatgtttga
     1621 atttagactg taaactggta ttttgtttag gattgaaaca taatgacacc cgccagtaac
     1681 aaaaaggaat ctagactctc atgtcatttg tatacctgtg gatctgccct gtattgttaa
     1741 ttctatttta caaaatagag gaagtgtcta atatatgtgc atagtcagtt gtcctttttg
     1801 aaaaataggt tgaaattcct ctggtcaggt ttttattaaa tttctgttga catcttcttt
     1861 a
//
