LOCUS       NM_001033192            3717 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus family with sequence similarity 8, member A1 (Fam8a1),
            transcript variant 1, mRNA.
ACCESSION   NM_001033192 XM_127312 XM_914272
VERSION     NM_001033192.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3717)
  AUTHORS   Kuninger,D., Kuzmickas,R., Peng,B., Pintar,J.E. and Rotwein,P.
  TITLE     Gene discovery by microarray: identification of novel genes induced
            during growth factor-mediated muscle cell survival and
            differentiation
  JOURNAL   Genomics 84 (5), 876-889 (2004)
   PUBMED   15475267
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124598.5.
            
            On Dec 13, 2019 this sequence version replaced NM_001033192.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK090371.1, SRR11927934.211713.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-779               AC124598.5         78787-79565
            780-900             AC124598.5         80519-80639
            901-1024            AC124598.5         82856-82979
            1025-1164           AC124598.5         83563-83702
            1165-3717           AC124598.5         84822-87374
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 24.28 cM"
     gene            1..3717
                     /gene="Fam8a1"
                     /note="family with sequence similarity 8, member A1"
                     /db_xref="GeneID:97863"
                     /db_xref="MGI:MGI:2145496"
     exon            1..779
                     /gene="Fam8a1"
                     /inference="alignment:Splign:2.1.0"
     exon            780..900
                     /gene="Fam8a1"
                     /inference="alignment:Splign:2.1.0"
     exon            901..1024
                     /gene="Fam8a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1025..1164
                     /gene="Fam8a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..3717
                     /gene="Fam8a1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1406..1411
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam8a1"
                     /note="hexamer: ATTAAA"
     polyA_site      1429
                     /gene="Fam8a1"
     regulatory      3698..3703
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam8a1"
                     /note="hexamer: AATAAA"
     polyA_site      3717
                     /gene="Fam8a1"
                     /note="major polyA site"
ORIGIN      
        1 gacgcccact gctgctgtgg tggcgagcga gcgagcggtt ggggaggggc cgccgagggc
       61 gggcgacggc gccttgacag gcagcgcgga gggggcctcc ggggcgacga tggcagaggg
      121 gcccgaggaa gcccggagcc gccctccgga gcaggatggc agtggcgggg accacgagcc
      181 ggtcccttcc gagccaggct ctcccaccac caccgtcgcc gccaccgccg ccgccccccg
      241 gtccccggcc ctcgcgagcg tcgcctcggc agtgtcggag cccgagccgc agtgcgagct
      301 ccgcaagcgc cgggagacgg gcgcggagcc tccggaggcg ggagactgcg aggcgtcgga
      361 cggcccgggg cggctgagcg cgcgcgagta ctcgcggcag gtgcacgaat ggctgtggca
      421 gtcctactgc ggctacctga cctggcacag cggcctggcc gccctgcccg cctactgcgg
      481 cccgccacca cccgccgcca ccgccccgca gcccgccgtc ccctcgccgt cgtccccgcc
      541 gacgccgtcg tccccgccgc caccgccgcc gccgcagctg gcgtactaca accccttcta
      601 cttcctgagc gctgcggggc ccgggccggg ggcggccacg ggcggcgcca ccccgacggc
      661 tgtcgcgggc ctcacggccc gggccccgca cgtgcagcca tcggcccggg cggcccccgg
      721 gaccagggtg ggttctgcag cccctgcgcg gactgccagc gacaccgggc ggcaggcagg
      781 tagagagtat gtcattccat ccttggccca cagatttatg gcagagatgg tggatttctt
      841 tattctcttc tttataaaag caaccattgt cttgagcatc atgcatctca gtggaataaa
      901 ggacatctct aagtttgcca tgcactatat aatagaagag attgatgaag acacatcaat
      961 ggaagacctg cagaaaatga tgattgtggc gcttatatac aggttgttag tttgtttcta
     1021 tgagataatt tgcatttggg gagcaggggg agctacccca ggaaagttcc tgctagggct
     1081 tcgagttgtg acatgtgata catcagtact cattgctcca agtcgggttt tagtaattcc
     1141 ttcctcaaat gttagcatca ctacgtccac catacgagct ttgatcaaga atttttctat
     1201 tgcttctttt ttccctgctt tcatcacact gctgtttttt cagcataatc gaacagccta
     1261 tgacattgta gcaggaacca ttgtggtaaa gagaaatggg gtcagatgat gtccagaacc
     1321 ctgaatccca ctctaaggaa taacgacaag actaaattat gtatcaaggc catcattatc
     1381 tatgggttac attgatgatt taaaaattaa agcagtcatt ccggtgtgat caggggtctg
     1441 ttctcaaagt gttgactgta cttgaatgtc aaggaacttc ttcagaagga aaaactatta
     1501 aatttaagtg ttaaaatatt tataggacaa caaagcaaat ttcataatcg atataagcaa
     1561 atacatactt taacatttaa gataaccaaa atttgctgga agcattttca gctttaaatt
     1621 ctctaaatca agttttactt taaagtttta ttttggctta tcctagagtg actgagaaat
     1681 atccaattgt gttttataaa cacctacaga actcccacag ctcttcttat ggaagctgct
     1741 ttttgtgagc attgagaaat catcaactca acaacccact tactccatgg caggtgttgg
     1801 gagaaaaggg ctagtgagga aggcctgaga gtcccctcac cccacacttg cagggtagtc
     1861 tagagcttgc tgcagtagtg gtgggatgtt tcagcttctt actgcttatg tatttggagg
     1921 caagattttc atgatgatga aaatgtactg agcatatcat tgatattttt aaaaggtaag
     1981 ttagttgcct tctgtaggga ctgggggtgg gagtggggat tggagtgggg atttccattg
     2041 taaattcagt ttagaattca tgtgcccaaa aatccaacta taaatatgca ggaggaatat
     2101 ccaaacattc ccagtatgtg ctctccagtg ttctgaatgt acctgtagat tctatttatg
     2161 tacagtaaat tcctaaggca ctgtgtattc tatacaattc caaaactgtc aagacatcaa
     2221 ggtgttaaga gtgtattttg tgaataactt gtactagcag cctgtgaaat attagcagtt
     2281 ttcctattat gaattgttct ctctaaagca aggcagcata taatcttcgg actttattct
     2341 agtttaagct cattttggcc tgttagagat gaaatttgga ggggggtggg gatgtgtcat
     2401 tgtactttgc tctgttggtg aaacattgga tttatgtctg tgtgcttttg ttgtgtcagt
     2461 tagctagctg taccaaaatg ttagtttaaa actttacttc ttactcattc ttgtgtagga
     2521 ttttcctgag aaacactaaa tcatattgca caagagagca atcttgacat ttaaaactgt
     2581 gaaatgcatt taatatctac agatacttta agaatctcct aagagctcat tgttcatcaa
     2641 ccatggtttc tcagaataat tttatttaaa ttaaatacaa cttcacagga agtcttattt
     2701 gtcaaaagca gtacatagag catgtgcttg tggctctggc aagattttaa agctcttcaa
     2761 acactacaaa ttgggaagct tggtgtggac aatcgccatt gatgagagaa ttcaagttga
     2821 aatgtgcttc acccacacag ctctggagta tttaattatt gtttctactg cgagtattga
     2881 ggtcttcact gaggatattt ttatttatac ggtaaataag tagttaaaat ttgttatagt
     2941 ttaaatacca gttaactcga caagttcttt agatctagct gtgaattcaa gttgtgccat
     3001 ataggatgta agataaaagt attgctttgc ctccacaata gaacctcagt tataaggaga
     3061 aaagggaatc tggcacattt ttccatgccg aagctgtatc ctgaaggggc aaaatgaaga
     3121 tctttaatga gcatgcccta agcctggagt cttgttgctg cattgccatt caggctaaac
     3181 aactggcaag tgatagtctc tcagtactca tcactaggga tgttctacac tctaggtaac
     3241 agcatgacga caaaccttac tgagtattcg tgactataaa cacatgccac ttttgacagt
     3301 gttcattgct tgactctgcc tacaaagcat ttacctaatt gcccaagcct caaaattgag
     3361 tcttcaaagt atctttaaaa gcattttaac tttaaatgaa acaatcacac ccgtttctgg
     3421 ccaagggaag tagttctgaa ggaagatggg gcattaagct ttctcatctc tgaggacggt
     3481 tcctagatca acagtattcc taaacaagta ctggttcagc tccttgccac caccatccac
     3541 ataaccaaag accaaagtcc ttactcgtgc ctgggtgaag ttcctcattt tggctggtat
     3601 gtgtagattt ccttgtagtt cactatagta gggcttaccc tgaaaacagc actctatttt
     3661 taatatttgt atgtcaccag tttgtatttt gtgtctcaat aaatacgtca atgtcaa
//
