LOCUS       NM_027788               2335 bp    mRNA    linear   ROD 09-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 83, member C (Fam83c),
            mRNA.
ACCESSION   NM_027788 XM_141565 XM_976748 XM_977168
VERSION     NM_027788.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL845445.14.
            
            On Jun 21, 2019 this sequence version replaced NM_027788.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC113797.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-610               AL845445.14        9591-10200          c
            611-778             AL845445.14        6841-7008           c
            779-903             AL845445.14        6285-6409           c
            904-2335            AL845445.14        4531-5962           c
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 77.26 cM"
     gene            1..2335
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /note="family with sequence similarity 83, member C"
                     /db_xref="GeneID:71405"
                     /db_xref="MGI:MGI:1918655"
     exon            1..610
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             143..2335
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /note="ortholog of family with sequence similarity 83,
                     member C FAM83C (5530400B04Rik)"
                     /codon_start=1
                     /product="protein FAM83C"
                     /protein_id="NP_082064.3"
                     /db_xref="CCDS:CCDS50770.1"
                     /db_xref="GeneID:71405"
                     /db_xref="MGI:MGI:1918655"
                     /translation="MAGPLRSRVEELKRPWWRESSPLVLQHSEAARLAADALLERGEA
                     AYLQVISEERELPFLSALDVDYMISHVRGVPELSEAQGSETLGQDLSMLSEVTSGTYF
                     PMASDLDPPDLDLGWPEVPQATGFSPTQAVVHFQRDKGKSIKDLLRFLFSQAQTVVAV
                     VMDVFTDMELLCDLMEASSRRGVPVYLLLAQEHLKYFLEMCYKMDLNGGHLVNMRVRS
                     TCGDTYCSKAGRRFTGQALEKFVIIDCEQVVAGSYSFTWLCSQAHTSMVLQLRGHIVE
                     DFDREFRCLYAESQPVEGFCSNEDPLMPQVPRPPPVTLAFGPAVPSATGSSPSSNSLS
                     SIKHSPLLARSSYLALPGGGGRNDMGMGSSSPGPAYHEAGGQPSLYRQLSDPNHISPP
                     GPYRANLSKLGASPWSQSSPALNHSSTSPLTLAVGSPLLPSSRPLLHFTRGVPALSRL
                     PENGLPASQDPSLPRGRWVPGTALETVEEKKVSLSQSHDHLDRLSPFSKAGEAGGPNS
                     RVTPDSSSLQHRELALDDRRLSLSHSHSQLDLLSQGQGVLESGSLRPGELSLENRKLS
                     LNHNHGQLDLLPQNPKPQAPKIPSDAYSSAGPSKPSLDDRRQTLGHSQLDLITKFGPF
                     RSEGPGPSCPPEPSPVRMAGVGSADEKRLTLGHSKLDLITKYHQLQGARQKPEPGIPG
                     APVSGHQNGSSNDLFAPEKRLTLGHSKLDLITKYNKSKFKQLRSRFES"
     exon            611..778
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            779..903
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            904..2335
                     /gene="Fam83c"
                     /gene_synonym="5530400B04Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcacatgcag ggctgccaag ctggcgccag tatcttcttc cttatagcag ccaacccaga
       61 tgcaaaccat ggagcctcgg gtgggttggg ctctaggtgg atacgcacat ttagccgaat
      121 agcacccgct gggacccagg gcatggcagg acccctgcgg agccgggtgg aggagctgaa
      181 gcggccctgg tggagggaga gctcacccct ggtgctccag cacagcgagg ctgcaagact
      241 ggcggcagat gccctcctgg aacggggaga ggctgcctac cttcaggtca tctccgaaga
      301 gcgggagctg cccttcctga gtgccctgga cgtggactac atgatcagcc atgtgcgtgg
      361 ggttcctgag ctcagcgagg cccaggggtc agagacctta ggccaagacc tcagcatgct
      421 ctctgaagtt acctcaggca cctacttccc tatggcttct gacttagatc ccccagacct
      481 ggacctgggc tggcctgaag tgccccaggc cacaggtttc agtcccactc aggcggtggt
      541 tcattttcaa agagacaagg gcaagagcat caaggacctg ctgcgattcc tcttcagcca
      601 ggcccaaacg gtggtggctg tggtgatgga cgttttcact gacatggagc tcctgtgcga
      661 cctgatggag gcctccagcc gacgtggcgt ccctgtctat ctccttctgg ctcaggagca
      721 cctgaagtac ttcctggaga tgtgttataa gatggacctc aatgggggcc acctggtgaa
      781 tatgcgtgta cggagcacat gtggagacac gtactgcagc aaggcaggtc gccgattcac
      841 cggccaggcc ctggagaagt ttgtcatcat tgactgtgaa caggtggtgg caggcagtta
      901 cagcttcact tggctatgca gccaggccca caccagcatg gtactgcagc tgaggggcca
      961 cattgtggaa gactttgatc gggagttccg atgtctgtat gcggagtcac agcctgtgga
     1021 gggcttctgt agcaatgagg atccactgat gccccaggtc cctcgccctc cccctgtgac
     1081 tctggccttt ggacctgcag ttccaagcgc cacaggctcc tcaccttcca gtaacagcct
     1141 cagcagcatc aagcactccc ctcttctggc ccggtcttcc tatcttgctc tacccggagg
     1201 tggtggccgc aatgacatgg gtatggggtc ctcatcccca ggtcctgcct accatgaagc
     1261 tggtggccag ccatccctgt atcgtcaact ttcagatccc aaccatatct cccctcctgg
     1321 accctatagg gccaacctga gcaagctggg cgcatcgcca tggtcccagt cctctcccgc
     1381 cctcaaccac agcagtacca gtcctttgac cctggcagtg gggtcacctc tgctcccaag
     1441 ttcccgccct ctcctccact ttactagggg ggtcccagca ctgtcccggc ttccagagaa
     1501 tgggctccca gcaagccaag accctagcct tccacgcggc cgttgggtac ctggcacagc
     1561 tctggagaca gtggaagaga agaaagtatc cctgagccaa agccatgacc acctggatcg
     1621 cctcagcccc ttctctaaag cgggagaagc aggaggtccc aactctaggg tcacccccga
     1681 ttcaagttcc cttcagcacc gtgagctggc tctagatgac aggagattgt ccctgagtca
     1741 cagccacagt cagctggatc tcctgtccca gggtcagggt gttcttgagt caggttccct
     1801 cagacctggt gagctgagtc tagagaacag gaagctgtcc ctaaaccata accatggcca
     1861 actggacctc ctgccacaga accccaagcc ccaggctcct aagataccct ccgatgccta
     1921 ttcttctgcc gggcccagca agccaagtct agatgaccga cggcagaccc taggtcacag
     1981 tcaattggac ctcattacca agtttggccc attcaggagt gagggacctg gacccagttg
     2041 tcccccagaa ccaagcccag ttcgcatggc tggagtaggc tctgcagatg agaagcgact
     2101 gaccctgggc cacagcaaac tggacctcat caccaagtat catcagctgc agggtgccag
     2161 gcagaaacct gagccgggca tcccaggggc tcccgtgagt ggccatcaga atggtagtag
     2221 caatgacctg tttgcacctg agaaacggct gaccttgggc cacagcaaac tggacctcat
     2281 cactaaatac aacaagtcca aattcaagca gctccgaagt cgctttgagt cctag
//
