LOCUS       NM_145553               3058 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus family with sequence similarity 76, member A (Fam76a),
            transcript variant 1, mRNA.
ACCESSION   NM_145553
VERSION     NM_145553.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK038831.1, AK037828.1 and BY415109.1.
            
            [WARNING] On Dec 5, 2023 this sequence was replaced by NM_145553.3.
            
            On Aug 1, 2009 this sequence version replaced NM_145553.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (A).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.1203686.1,
                                           SRR7345562.893313.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1635              AK038831.1         9-1643
            1636-3043           AK037828.1         1321-2728
            3044-3058           BY415109.1         355-369
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 66.01 cM"
     gene            1..3058
                     /gene="Fam76a"
                     /note="family with sequence similarity 76, member A"
                     /db_xref="GeneID:230789"
                     /db_xref="MGI:MGI:2385211"
     exon            1..194
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     CDS             114..1037
                     /gene="Fam76a"
                     /note="isoform A is encoded by transcript variant 1;
                     protein FAM76A"
                     /codon_start=1
                     /product="protein FAM76A isoform A"
                     /protein_id="NP_663528.1"
                     /db_xref="CCDS:CCDS18738.1"
                     /db_xref="GeneID:230789"
                     /db_xref="MGI:MGI:2385211"
                     /translation="MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTE
                     YQQESKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPYSCE
                     QCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHLSSSSRGSHQEKEQY
                     SRLSGGSHYNSQKTLSTSSIQNEIPKKKSKFESITTNGDSFSPDLALDSPGTDHFVII
                     AQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQTRAKMNQMEKTHKEVTE
                     QLQAKNRELLKQAAALSKSKKSEKSGTITSP"
     exon            195..259
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            260..314
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            315..467
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            468..625
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            626..712
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            713..848
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            849..950
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
     exon            951..3046
                     /gene="Fam76a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccgccctc cgcagcccgc ggcccggccg ccgccgccag gttgtgcctg agactgtcag
       61 ataaagcggc gggccggcgg gaggggcggc ggcgatcacg gcccgggccg gacatggcgg
      121 cgctgtacgc ctgcaccaag tgccaccagc gcttcccctt cgaggcgctg tctcaggggc
      181 agcagctgtg caaggaatgc cggattgctc accctgttgt gaagtgtacc tactgtagga
      241 ccgagtacca gcaggagagt aaaaccaata caatttgcaa gaagtgtgct cagaatgtac
      301 agttgtatgg aacgcctaag ccttgtcagt attgcaacat aattgctgca tttattggga
      361 ataaatgcca gcgctgcaca aattcagaga agaagtatgg acccccatat tcctgtgaac
      421 agtgcaagca gcagtgtgca tttgacagga aggatgatcg aaagaaggtg gatgggaagt
      481 tgctatgctg gctgtgcacg ctgtcgtaca agcgtgtcct tcagaagacc aaagagcaga
      541 ggaagcacct gagcagctct tctcgaggca gccatcagga gaaggagcag tacagccgcc
      601 tgagtggagg cagccattac aacagccaga aaacactttc tacatcttca attcaaaatg
      661 aaatcccaaa gaaaaaatcc aagtttgagt caatcacaac taacggagac agcttttctc
      721 cagacctggc tctggattcc ccaggcactg accactttgt catcattgct cagctgaagg
      781 aagaggtggc cactctgaag aagatgctgc atcagaagga tcaaatgatc ctagagaaag
      841 agaagaagat cacggagctg aaggctgatt ttcagtacca ggagtctcag actcgggcca
      901 aaatgaacca aatggagaaa acccacaagg aggtcacaga gcaactgcag gccaaaaacc
      961 gagagcttct gaaacaggca gctgccttgt ccaagagcaa gaagtctgag aagtcaggca
     1021 ccataacgtc tccgtgaaga cgtgaggagg ctcccagcac caagcccgtg ctcccgggtc
     1081 agggctgctg agctggctgg tctctgggaa gtgtgcttcc tacaaaatct ctatattttc
     1141 ttaccttacc ctctttgttc ggatgcagtg ggctgaaagg aactcctggt ctgtgccctg
     1201 ttatggctgc atgctgagcg gttagggtcc cagacctcct cctttcctcc tcccactccc
     1261 cgcccccgtg gcccccccct ctctgtttta gtactctgtt ttccatagtg gtcactgctc
     1321 agtgtcacgt gcagagtgtc tgtccaccat cacacctgcc atccccgtga gcaagcagtc
     1381 tgtcgtcagc tgtacatcac tgccgctccc aacctcgaaa actgccacct ggagactctg
     1441 tgcagtgagg gaggcttttt ctcaccaata aaccttttgc ttcagggtat actcttgggt
     1501 tttttccagg tatattatgt atgacctttg tacaatgtat agacagagtt ttatttattt
     1561 tttaaaaagg aaaccttttc ttgataaagg aatgatggta gcctagctag ttcttgtaaa
     1621 agtgatgcct ctttgaaaaa agaaaaaaaa acaaaaaaca aacccagtcc cgtttgctag
     1681 cttttagtag aagaacgcaa ccttttcttt ctcattgcct tagagtcttg atgctgaggt
     1741 aatgttggag gcgtacgtgt ggagctaagt gccttttgga ggaccccatg gaagagcgtg
     1801 tgaggagagg cttaaggacg gttgctgagt atggccagtc tgtctttaag tagggcagaa
     1861 agatgcttgt ccaggttgta ctggacactt cctcctctac ccacccctcc tcctccttct
     1921 acataatttt aaattcccac actgccactt cttttttaaa agtattcctg tttcttgcta
     1981 catcagctgt cgtaccacgt tgttatcaca acctggatct ttggttttgt tttttaactt
     2041 gagcagattc aagcgggata agacgtgaac tactgagcat ttccgagggt tggcatgggt
     2101 tgcttgggtg tgggctgcac ggtggggagg acctcactgt tccttccttt ctctccctca
     2161 tcccgcgtgc tccctgttct taatggaaag tcagaaagca cgcgcttctg ggagccgaag
     2221 ggtgtgccct tatccctgtc tgactcagta gttgtgggaa ggagctgcgc ccctccatct
     2281 ttgggaaagg aactagagat ggggagtatg tgctgggaca cagagcaaac cctgcagtga
     2341 gtgccagcgg tgctggagct agagcggatc ctgaaggcag tgacattggg acagtcaggg
     2401 tcactgttca cctgctctgt agtctgggat tacgttctcc aaagagtcac atgcacacag
     2461 gtgagcagcg gtccgcactc gagtggctct tcccgacagg agattcgaag gactgtgttt
     2521 ttgtaacact ggtcgggagt gcaattttcc cttctaagca gggaaagctg ctgtgctaaa
     2581 tcattttgta actttccgaa tgagagactt cggtaaagat aaactcgttc agtatttttc
     2641 aaatgcattt gcattggctg tggggaaaag atggtaggaa aagaataaca gtcatggttt
     2701 cgtcaatgaa aagtaagact gagaaattgt tggtgtggtg tgacaatata caaaggctta
     2761 cttagtttta tactaaacct tttttaaggt cttagcattt aatattcagc aaatccacac
     2821 attttctaaa ctaccacaag ctcctgaaag atagaggaac ctcagtcctg aaatggtgat
     2881 ttttttttta aatcatgaca gcattttacc atgtaattga gtaacttttg gtaacacctt
     2941 ctgcttcttt gtatgtttgt aataatggac attttaaaac ataggaatgt ttgctttgta
     3001 cagactttga caaatgtgtg ttaataaaac ttcatactga ctcagaaaaa aaaaaaaa
//
