LOCUS       XM_011249499            1800 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus family with sequence similarity 47, member
            E (Fam47e), transcript variant X4, mRNA.
ACCESSION   XM_011249499
VERSION     XM_011249499.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011249499.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..1800
                     /gene="Fam47e"
                     /gene_synonym="C730043O17; Gm1381"
                     /note="family with sequence similarity 47, member E;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 2 ESTs, 19 long SRA reads, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:384198"
                     /db_xref="MGI:MGI:2686227"
     CDS             104..1129
                     /gene="Fam47e"
                     /gene_synonym="C730043O17; Gm1381"
                     /codon_start=1
                     /product="protein FAM47E isoform X4"
                     /protein_id="XP_011247801.1"
                     /db_xref="GeneID:384198"
                     /db_xref="MGI:MGI:2686227"
                     /translation="MAECGQRLQPTTLAPRLLRERQNCGWYLGNLPPKRFIRRNRLTC
                     QGFLNSRHWVFVKEDNFRKDCPPHQSPKDAFLPLIHRGAPSATPEKRQSTLLKGATLL
                     SKLSKAGKAFLEDVEAEAAQHPLTLYPQLTEALPAELLLQVLEVLDPERKLEDVWAYC
                     QDTRKPMKEPTELVGKRSSQERPPKKTLISRSGQWLCEEKSSKVDSLYKDRLLHDDVH
                     RGVTDFCHWAEDLNPQKPKRVKMRYGAWYLNTSLWKRQRADEPLVDPMVSHKAQDSTF
                     KEQLQEQGELLAGLRGTAAFKDFILSRGYRMPRFLEKIYAEEKNKSENIKAPKKLTQT
                     EKNPGSR"
ORIGIN      
        1 tgcgcgccaa attgggcagg tccgggcaac tcggggctgt gctggtctcc tagcaacttg
       61 ggaagccgtg ggagaaactt gccacacaag actgggcagt gccatggcgg agtgtgggca
      121 gcggctccag cccacgaccc tggctcctag actgctgagg gagcgccaga actgcgggtg
      181 gtacctcggg aacctgcctc ccaagcgttt cataaggcgg aaccggctga catgccaggg
      241 cttcttgaac agccggcact gggtgtttgt gaaagaggat aacttcagga aagactgccc
      301 cccgcaccag agccccaagg atgcctttct acctcttatt catcgcggag cccccagtgc
      361 taccccagag aagaggcaga gcacactgct caagggggca acgctgttgt ctaagctttc
      421 gaaagctggg aaggcattcc tggaggatgt ggaagctgag gcggctcagc acccgctgac
      481 tctctaccca caacttacag aagctctgcc tgctgagctc ttattgcagg tgctggaggt
      541 actggaccct gagaggaagc tggaggatgt gtgggcttat tgccaggata ccaggaagcc
      601 aatgaaggaa cccacagagc ttgtaggaaa acgctcttcc caagaacgcc cgcctaagaa
      661 gacgctgatc tcacgttcag gccagtggct ttgtgaagaa aagtcaagca aagtggattc
      721 actctataaa gacagactcc tccatgatga cgtacacaga ggagtcaccg acttctgcca
      781 ctgggccgag gaccttaatc ctcagaagcc gaagcgggta aagatgaggt acggagcctg
      841 gtacctgaac accagcttgt ggaagaggca aagagcggat gaacctctgg tcgaccccat
      901 ggtctcacac aaagctcaag attcaacctt taaagagcag cttcaggagc agggggagct
      961 gcttgcaggc ctgcgaggga cagcagcctt taaggacttc attctaagca ggggctacag
     1021 gatgcccagg ttccttgaga agatatatgc ggaggagaaa aataaatctg aaaatattaa
     1081 ggctcctaaa aaactcacgc aaacagagaa gaatcccggg agcagatgag tcggctttga
     1141 ttgacagcat ccttggatac tgccccatta gtttaattaa taagtagaat atagcagtgc
     1201 cctccgtgaa ggcttcaacc tggcagcatc tacaaatata aaactgaaca caaatgtctt
     1261 tctaaacagc tttttaaagg ctttagggtt tttttgtagt atttttagtt atgtacagct
     1321 gtgtatgtct gcatgtgggt aggtgcacac aagtctagga gccttcagaa gcctgaagcg
     1381 ttgaatgccc tggagccgca gttacagagg gttgtgagcc accatgtggg tgctgggaac
     1441 tgaaccttgg tcctctcgac gaacagtgag ctgtcccgat ggctgatcca tctctccagc
     1501 ctccactgat caatgttttg tttgcttgtt tgtttggttt gggggtttgg ccttctttag
     1561 ggagagtctt gctatgtggc ctaggctgac ctctaattag tcatccccct gtgttagcct
     1621 ctcagggtct agagttgcag ctctgcacca acacacctgg tgcacaaaat aatacatttt
     1681 gtatatttac caactatggg ctcaatattc gtgtgtagtc ctctcacgct ttcgtgttat
     1741 gaagatgcca taaatgattg atttcttgta aaaataaaat cataggcaaa gtcacaatta
//
