LOCUS       NM_001164739            1648 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus family with sequence similarity 47, member C (Fam47c),
            mRNA.
ACCESSION   NM_001164739 XM_135940 XM_980994
VERSION     NM_001164739.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL671900.5.
            
            On or before Sep 18, 2009 this sequence version replaced
            XM_980994.1, XM_135940.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK014848.1, BC115971.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1648              AL671900.5         85909-87556
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 38.35 cM"
     gene            1..1648
                     /gene="Fam47c"
                     /gene_synonym="4921509A18Rik; Fam47a; Fam47a-ps"
                     /note="family with sequence similarity 47, member C"
                     /db_xref="GeneID:70864"
                     /db_xref="MGI:MGI:1918114"
     exon            1..1648
                     /gene="Fam47c"
                     /gene_synonym="4921509A18Rik; Fam47a; Fam47a-ps"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..1344
                     /gene="Fam47c"
                     /gene_synonym="4921509A18Rik; Fam47a; Fam47a-ps"
                     /note="family with sequence similarity 47, member A,
                     pseudogene"
                     /codon_start=1
                     /product="uncharacterized protein LOC70864"
                     /protein_id="NP_001158211.1"
                     /db_xref="CCDS:CCDS59771.1"
                     /db_xref="GeneID:70864"
                     /db_xref="MGI:MGI:1918114"
                     /translation="MGEQWLPWNRPRQVLQPMPLGMTCKPWFKDRLPSKCFAKHKQEQ
                     HKFPTSLDGRRWVFVKEGLDDFRKGCPPSEGMIIRGPKDGFLPTISHEVHHGSRKSQK
                     NRCQDLSLFSSLSLAQQARKAFVKRTEAKLTQRPLVFWPLEDGIPSDIELLENVLEAL
                     DTDQKLEAKVDHCEDRRKYIHSVHLPSVAEESSEKEEPEPHRFPGSRKYSMLQEKKPR
                     KKNPAKQSLYYHHIPKGVYDFCAWVNSFGDLGIDEHFMMKQFDIGYECKPVYTDSAIK
                     KISLLPPDLRFCRRLSKVKEIRFSIQEANFERKLRKPFDPYKSNRDKIRYGAWYLKPY
                     LWKKLVNDEPLMDPEELFELEGGKYSKPDIIEDLYGTIAFKDFILSKGYSMPAILEKL
                     FMRKGWNYDTVNTPIPRVLKAHELIMQQRDEDYDDEND"
ORIGIN      
        1 aggaaaacaa acttttaagg ctgtgacaat tgcctcagat ccagaggtac catgggagag
       61 cagtggctgc catggaatcg cccccggcag gtacttcagc caatgcctct gggaatgacc
      121 tgcaagccct ggttcaagga caggttgcct tctaagtgtt ttgcgaagca caaacaggaa
      181 caacataagt tccctacctc tctggatggc cgacgctggg tgtttgtgaa ggaagggctg
      241 gatgatttca ggaagggctg tccgcctagt gaaggtatga tcattcgtgg tcccaaagac
      301 ggttttctcc ccacaatttc tcatgaagtc caccatggct ccagaaagag tcagaaaaat
      361 cggtgccagg acttaagcct gttttcctct ctgtcattgg cccagcaagc tcgcaaggcc
      421 tttgtgaaga gaacagaagc aaaactgacc cagcgtcctt tggttttctg gcccctggag
      481 gacggaattc ctagcgatat tgagctctta gaaaatgtgc tagaagctct tgacactgac
      541 cagaagttgg aggctaaagt ggatcactgt gaggacagaa gaaaatatat tcactctgtt
      601 catctgccta gtgtggctga ggaatcctct gaaaaagaag aaccagaacc tcacaggttt
      661 cctgggtcac gtaaatacag tatgcttcaa gaaaaaaagc cccgcaaaaa gaaccccgcc
      721 aagcagtctc tttattacca ccacataccc aaaggagtct atgacttctg tgcatgggta
      781 aactcatttg gagacttggg cattgatgaa catttcatga tgaagcaatt tgacattggc
      841 tatgagtgca aaccagtcta tactgattct gccatcaaga aaatcagcct gcttcctcca
      901 gatctcaggt tctgcaggag gctcagcaaa gtgaaagaga tcagattctc catacaggag
      961 gcaaactttg aaaggaaact ccgaaaaccg tttgatcctt acaagtccaa cagggataag
     1021 attagatatg gagcatggta cctgaagcca tatctgtgga aaaagctagt aaatgatgag
     1081 cctttgatgg accctgaaga gttatttgaa cttgaaggtg gaaagtacag taaaccagac
     1141 atcattgaag atctttacgg aacaattgcc tttaaggatt ttatcctaag caaaggctac
     1201 agtatgccgg ccatcctgga gaagttgttt atgaggaaag gatggaatta tgacactgtc
     1261 aacactccaa taccaagagt actcaaagca catgaattga tcatgcagca aagggatgaa
     1321 gattatgatg atgaaaatga ctagctgatt ttcgatttta cttgacttta ctctcatttc
     1381 aaatattgaa cggaatatat atgatgaagt tatcactaaa tgtgaccatc tttttggaca
     1441 atatctatct ataatgtaag atgtaatgtt tacaaacatt tctcaatgag ctcaaatgaa
     1501 cttctgtgcc tgcataaata tcttatcaac ttgaagatca acaatcatat acacagttat
     1561 taaatttatt tactattgag aatgtggagg tcaaccagtt acttataaga atataaaaat
     1621 taataaaaat cttaattact actgttag
//
