LOCUS       NM_177632               3075 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus family with sequence similarity 43, member A (Fam43a),
            mRNA.
ACCESSION   NM_177632
VERSION     NM_177632.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Mariappan,D., Niemann,R., Gajewski,M., Winkler,J., Chen,S.,
            Choorapoikayil,S., Bitzer,M., Schulz,H., Hescheler,J. and
            Sachinidis,A.
  TITLE     Somitovasculin, a novel endothelial-specific transcript involved in
            the vasculature development
  JOURNAL   Arterioscler Thromb Vasc Biol 29 (11), 1823-1829 (2009)
   PUBMED   19542019
  REMARK    GeneRIF: We have shown the participation of a novel transcript
            (named somitovasculin) in circulatory vessel development
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK083036.1 and BY428362.1.
            
            On Apr 16, 2009 this sequence version replaced NM_177632.2.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2707              AK083036.1         1-2707
            2708-2920           AK083036.1         2709-2921
            2921-3075           BY428362.1         210-364
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     gene            1..3075
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /note="family with sequence similarity 43, member A"
                     /db_xref="GeneID:224093"
                     /db_xref="MGI:MGI:2676309"
     exon            1..3075
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             878..2152
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /note="somitovasculin"
                     /codon_start=1
                     /product="protein FAM43A"
                     /protein_id="NP_808300.1"
                     /db_xref="CCDS:CCDS28103.1"
                     /db_xref="GeneID:224093"
                     /db_xref="MGI:MGI:2676309"
                     /translation="MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPE
                     GALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEA
                     GRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHE
                     LKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGA
                     HTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQQEEELQEEEEEHLED
                     CLEEEEEEDGVGDGDPAEEEAEAQRALVVAMQLECEDLLDPLENGHEEALGDGGVSLG
                     PSSGTSLPLSVCASDMKAQLSQLISDLGDLSFGNDVSTLETDLRVTRLLSGESTGSES
                     SIEGGGLDATPVSPGNPSGPADSTSLDEPYSG"
     regulatory      2978..2983
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /note="hexamer: TATAAA"
     polyA_site      3006
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /note="major polyA site"
     regulatory      3048..3053
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
                     /note="hexamer: AATAAA"
     polyA_site      3075
                     /gene="Fam43a"
                     /gene_synonym="Tuf1"
ORIGIN      
        1 ggcaatgatg tgaagcgagc aagtcggcta ccgcgcgcac gaccacagag ggcgcgctgc
       61 agatcgccga gaaccccgaa gcggagccgg acacccccgg agggaagcaa tgaggtagcg
      121 gcagtccccg gagcggacga tgtgcgcgtc ctgccctccg aaccccgcgc taccttggcc
      181 gagacggccg agcgcgagtc tccggcgtcc cctcggagcg aggatgcagt gagctgcggg
      241 accgctgtgc ttggcccgcc gcggccagcc agacctctcg gaccacactt ggggcaagct
      301 gcttattcag ggaccagtcc agccaagggg ctcgccctct tctgcaccca ctgggggtgg
      361 ggagcaccgg cccctgggcg cactgctgta gtttccgcgg ctcctggccc tggcccaaga
      421 cttgtgtgtg tgtcacgttc gctgaagaag agttccagct tatttctctc accatcccgg
      481 ttgctttggc cgagccgccc acctttattt atttgtacgc actcatttgg cctttttcta
      541 aaatattttc cgctccgctc tcttattttg ttgcttgttt gagacttttg tcctggtcct
      601 cctcatctag gcttctctct ctctctctct ctctctctct ctctctctct ctctttcctg
      661 aatatttttt tctaatatcc taccccagtc cctgcggggt tcccaagcac tatctggcct
      721 ctcctgcctc catctccctg ccccggaggt cctcccagcc tgagttttat ttttcgagct
      781 tgcccgggcc aagcgtagcc tgggttggtg gccctgcggg gctctcaccc cgcgctcggc
      841 caccgccgcc ccagccactc ccgggcgtcc tccggagatg ctgccgtgga agaagcacaa
      901 gttcgagctg ctggccgagg cgccgccgcg gcaggcgtcc aagcctaagg gctacgctgt
      961 gagcctgcac tactccgcgc tcagctcctt ggcgagagcc tgcccggaag gcgcgctcag
     1021 ccgggtgggc agcatgttcc gctccaagcg caagaagctg cacatcacca gcgaggaccc
     1081 cacttacact gtgctctacc tggggaatgc caccaccatc caggcgcgcg gggacggttg
     1141 cactgaccta gcggtgggca agatctggag caagagtgag gccggccgtc aagggactaa
     1201 gatgaagctg accgtgagtg cgcaaggcat ccgcatggtg catgccgagg agcgagcgct
     1261 gcgacgtccc ggccacctct acctgctgca ccgcgtcacc tactgtgtgg cagacgcgcg
     1321 gctacccaaa gtcttcgcct gggtataccg gcatgagctg aagcacaagg cggtaatgct
     1381 acgctgccac gcggtgctgg tgtccaagcc ggagaaggct caggccatgg ctctgctgct
     1441 ttaccagaca tcagccaacg ctctggcaga gtttaaacgt ctcaagcggc gggatgatgc
     1501 gcgtcaccag cagcaggagt tggtgggcgc acacaccatc ccactagtgc cgctgcgcaa
     1561 gctgctcttg cacggacctt gctgctacaa gccgccagtg gagcgcagcc gcagcgctcc
     1621 caagctgggc tccatcaccg aggacctgct tggggaacag caagaggagg agctgcagga
     1681 ggaagaagag gagcatctgg aggactgcct ggaggaggag gaagaagagg acggtgtggg
     1741 ggatggggat ccagcagagg aagaggctga ggcgcagagg gcgctggtgg tggccatgca
     1801 gttggaatgt gaggacttgc tggacccgct ggaaaatggc cacgaggagg cgttggggga
     1861 cggcggggtc tcgctgggcc ccagctcggg gacatcactt cctctgtcag tctgtgcctc
     1921 agacatgaag gcccaactgt cacagcttat tagtgacctg ggcgacctta gctttggcaa
     1981 tgacgtgagc accctggaga ccgatttaag ggtgacacgc ctgctgtcgg gcgagagcac
     2041 aggcagcgag agctccatcg agggcggagg cctggatgcc acccctgtca gccctggcaa
     2101 cccatcgggc cctgctgaca gcaccagcct agatgagccc tactcgggct aagctgccag
     2161 aagacttctc tgtgcgcccc tcccaacata cacatagtgg ctccccaaca gtagttctat
     2221 tccccctaac ctccaggaaa gggaaaatga tgcacttgaa gcccagaccc gactttggag
     2281 ttttctgggg aagctattcc ctcttgctag ttgccccagc gctttggctc agaggtggct
     2341 caggttgtga acagggggat ggggggcagg gagggcgaga agcactacaa aggtgggtga
     2401 gggagagctg gctgaagttg gaaaaggcca agggcgggct ggaggtgccc agcagccggt
     2461 ttcctgtttg tgaggcagct ggggctaggg aaggaggggt taacttcctc tccagacccc
     2521 ctgactggaa ggcctctttc tgtcatcaat atctcattaa caaagtcact ttcaaaacgt
     2581 tggaggcttc aatgccactt tacctgcccc cagttctttc ggatagggga gcttgggctg
     2641 tttacctcag actcaaactc ttgaaagttt gccaaatttc tcaaataact cttcttgggg
     2701 gggggggcag tgtatgaaag tcgtgttttg tttacagtta aagaaaccta atatctaaaa
     2761 aacaaaaaag gaattttcct ttagaaatac acaccttcct ctggccccaa agctcctact
     2821 ccatgatgct atgtaaaata tttttgcact gttgtgaagt atttttgact ttttgttttt
     2881 tgtacataac tgtgttctcg gagctgaatg tttatatctc ttttgctgtg caaaagatac
     2941 ctgtaaaatg ttgtacggtt gtatatatgg aaatgtgtat aaaacatttt gttatttttt
     3001 tgagcagcct tgtttcagtt ctgttggcat gtcagcagcg gggtgagaat aaagaggaaa
     3061 agctgtcaga acagg
//
