LOCUS       NM_001400253            2756 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 234, member A
            (Fam234a), transcript variant 9, mRNA.
ACCESSION   NM_001400253 XM_030249413
VERSION     NM_001400253.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Gineste,C., De Winter,J.M., Kohl,C., Witt,C.C., Giannesini,B.,
            Brohm,K., Le Fur,Y., Gretz,N., Vilmen,C., Pecchi,E., Jubeau,M.,
            Cozzone,P.J., Stienen,G.J., Granzier,H., Labeit,S.,
            Ottenheijm,C.A., Bendahan,D. and Gondin,J.
  TITLE     In vivo and in vitro investigations of heterozygous nebulin
            knock-out mice disclose a mild skeletal muscle phenotype
  JOURNAL   Neuromuscul Disord 23 (4), 357-369 (2013)
   PUBMED   23375831
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126438.3.
            
            On Jan 20, 2022 this sequence version replaced XM_030249413.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.1307055.1,
                                           SRR7652917.762230.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-155               AC126438.3         61092-61246
            156-267             AC126438.3         79229-79340
            268-567             AC126438.3         84672-84971
            568-684             AC126438.3         86501-86617
            685-879             AC126438.3         86934-87128
            880-1016            AC126438.3         87822-87958
            1017-1149           AC126438.3         88561-88693
            1150-1279           AC126438.3         88934-89063
            1280-1420           AC126438.3         89927-90067
            1421-1496           AC126438.3         90525-90600
            1497-1634           AC126438.3         90769-90906
            1635-1737           AC126438.3         91346-91448
            1738-2756           AC126438.3         91535-92553
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 13.07 cM"
     gene            1..2756
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="family with sequence similarity 234, member A"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
     exon            1..155
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            156..267
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            268..567
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             300..1949
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="isoform 2 is encoded by transcript variant 9;
                     protein ITFG3; protein FAM234A"
                     /codon_start=1
                     /product="protein FAM234A isoform 2"
                     /protein_id="NP_001387182.1"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
                     /translation="MMDNKDLEAEIHPLKNEDKKSQENPGNLPRNEDNLKSKPVPSRL
                     SRCRTVAFFLSLFTCLFVVFVLSFIIPCPDRPSSQGTWKLDYNNAVMYDFLALGDINK
                     DKVQDVLFLYKNTNSSNNLTRSCADEGFSTPCAFVVAVSGANGSVLWERPVAQDVALV
                     KCAMPQTLDSDEVSSACIVVGRAGSFVAVSFFTGETLWSHPSSFSGNVSILSPLLQVP
                     DIDGDGDGTPDLLILAQEGQEVSGALYSGSTGYQIGHRGSLGVDGDGVALLHVTRTGA
                     QYILLPCASALCGFSVKSLYERITGRDGHFKEDPYWENMLNHSVHRRLLHRLGAVRYL
                     MNIPGKAGQDLLLVTSEACVLLDGQDLEPRWTLGEVQVLRKPILGHYKPDTLAVVIEN
                     GTSIDRQILLLDLSTGSILWSQPLPSLPGGPPSTSLMTADHRSAFFFWGLHDLDPPDV
                     QHSLYMFHPTLPGILLELANVSANIVAFDAVLLEPSRHAAYVLLTGPASSDVPGLVSV
                     TKHKVQDLVPGSRVIHLGEGSSDSDQAIRDRFSRLRYRSEM"
     exon            568..684
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            685..879
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            880..1016
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1149
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1279
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1280..1420
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1496
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1497..1634
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1635..1737
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1738..2756
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2710..2715
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="hexamer: AATAAA"
     polyA_site      2756
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="major polyA site"
ORIGIN      
        1 gctgtccggc gtagtctgta ctcctgttca gccgctgtcc tcccgggaac cttggggatg
       61 tggatcccgg attccaggga ccgcagttga gccagcctcg ccagtcctgt accacttgct
      121 gaggagcagg atctcgcgga caggtccgag agcaggtctg cctgggctta tgaagacaaa
      181 gccccccaag accaatgagc agatagatgc cccagcagtt ggccaggatc atctgttgaa
      241 caccccctca ggtactccac cgaccagtgg ccacagttaa gctctggaat gtgctcagga
      301 tgatggacaa caaggactta gaagctgaaa tacacccctt gaagaatgag gacaagaaat
      361 cacaggaaaa cccaggaaac ctaccaagaa acgaagataa cttgaagagc aagcctgtgc
      421 cttcccgctt gtcccggtgc cgcacagtgg catttttcct ttccctgttc acctgcctct
      481 tcgtggtgtt tgtcctgtct ttcatcatcc catgtccaga ccgtccctcc tcacagggca
      541 cgtggaagct tgactacaac aatgcagtca tgtacgactt cctggctctg ggagacataa
      601 acaaggacaa ggttcaggac gttctttttc tttacaaaaa taccaacagc agtaacaatc
      661 tcaccagatc ctgtgctgat gaaggctttt ccactccttg tgcctttgtg gttgcggtgt
      721 caggagccaa tggcagcgtg ctctgggaga gacccgtggc ccaagatgtc gcccttgtaa
      781 agtgtgccat gccacagaca ctggacagtg acgaggtgtc ttctgcctgt atcgttgtgg
      841 gaagagctgg ttctttcgtt gcggtcagct tttttacagg agaaaccctg tggagccatc
      901 ccagcagctt tagtgggaac gtttccatcc tgagccctct gctccaggtg cctgacattg
      961 atggtgatgg tgacggtact ccagacctcc tgatcctcgc ccaggaggga caggaggtca
     1021 gtggagctct ctattcaggt agcactgggt accagattgg ccacagaggc agccttggtg
     1081 tggatggaga tggtgtcgcc ctccttcatg tgaccagaac tggtgctcag tatattctcc
     1141 tgccctgtgc aagtgccctc tgtggcttct ctgtgaagag tctctatgag agaattactg
     1201 ggcgagatgg ccattttaag gaagacccct actgggagaa catgctcaat cactctgtcc
     1261 acaggaggct tctgcacaga cttggagcag ttcgctacct gatgaatatc ccagggaaag
     1321 ctggccagga cttgctcctt gtgacctctg aggcctgcgt gttgctggat ggacaggatc
     1381 tggagcccag gtggaccctt ggtgaagttc aggttctgag aaaacctatc cttggccact
     1441 acaaacctga caccttggct gtggtcattg agaatggaac cagcattgat agacagatcc
     1501 tacttctgga cctcagtact gggtctatcc tgtggagcca gcccctccca agcctgcctg
     1561 ggggcccacc atccacaagc ctgatgactg cagaccaccg ctcagccttc ttcttctggg
     1621 gcctccatga tcttgatccc ccggatgtgc agcacagtct gtatatgttc cacccgaccc
     1681 tgcctggcat cctgctggag ctagccaacg tgtctgccaa catcgtggcc tttgatgccg
     1741 tcctgcttga gccaagccgc catgctgcct atgtgctcct gacgggccca gcaagctcag
     1801 atgtgcctgg cctggtctct gtcaccaaac acaaagtgca agaccttgtc ccaggcagta
     1861 gagtgatcca cttgggtgaa ggcagctcag acagcgacca ggctatccgg gaccggttct
     1921 cccgactacg gtaccggagt gagatgtagg tgttgtcggc tggagcacac ggagagattc
     1981 caactgtgaa aaggaagcct cttggaaagc tggcctgctc tcggccttca tgctgacctc
     2041 actgctcgcc ctgatgattc gggccctctg gagctatggc cttaccagtt ctacccagga
     2101 tgttgagagt ggggggcacc ttccagcctc ctgcccatac catgtcctcc ctcaaaggtc
     2161 tcactgcgtg gcccactgat ctggtcaagt aaggctccct gggctggctt gggcaaggca
     2221 gcccacagga ggctcattta tcacttcctg cctccttacc ctctcccagg aaagccacca
     2281 ctgtgtgctg tgctgctccc tagtccctct caggccagcc tggctttccc catttcggca
     2341 ctgtccctca ggggtcacga aactcagggc tgtagctgga acctgaggct tggaagctgc
     2401 ttccccacag cagaagggag catgtctcct ggaaagcgag caaccctgag tctgaccaga
     2461 gcctccgggt gcgagggatt tccagactgt acgctgagtc agtccttcgc ctcagtacac
     2521 tgtccctgca ccctggcaca gcgggcacgt ctctttccct actctggtgc ttatctgatg
     2581 gcggtctcac cttgtgcctt gtttgttgtt cctgaagccc aagggcaaca gagcagcttt
     2641 gcccagatca catccatagc tctgtagcca aagcagtccc atgaccccag ccaccatgga
     2701 aaccaacaca ataaacgatt tgcactgatg gggaaagccc ccgtagtcca gcgtga
//
