LOCUS       NM_001400252            2644 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 234, member A
            (Fam234a), transcript variant 8, mRNA.
ACCESSION   NM_001400252 XM_030249414
VERSION     NM_001400252.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Gineste,C., De Winter,J.M., Kohl,C., Witt,C.C., Giannesini,B.,
            Brohm,K., Le Fur,Y., Gretz,N., Vilmen,C., Pecchi,E., Jubeau,M.,
            Cozzone,P.J., Stienen,G.J., Granzier,H., Labeit,S.,
            Ottenheijm,C.A., Bendahan,D. and Gondin,J.
  TITLE     In vivo and in vitro investigations of heterozygous nebulin
            knock-out mice disclose a mild skeletal muscle phenotype
  JOURNAL   Neuromuscul Disord 23 (4), 357-369 (2013)
   PUBMED   23375831
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126438.3.
            
            On Jan 20, 2022 this sequence version replaced XM_030249414.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.2935491.1,
                                           SRR10662772.2001266.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-155               AC126438.3         61092-61246
            156-455             AC126438.3         84672-84971
            456-572             AC126438.3         86501-86617
            573-767             AC126438.3         86934-87128
            768-904             AC126438.3         87822-87958
            905-1037            AC126438.3         88561-88693
            1038-1167           AC126438.3         88934-89063
            1168-1308           AC126438.3         89927-90067
            1309-1384           AC126438.3         90525-90600
            1385-1522           AC126438.3         90769-90906
            1523-1625           AC126438.3         91346-91448
            1626-2644           AC126438.3         91535-92553
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 13.07 cM"
     gene            1..2644
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="family with sequence similarity 234, member A"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
     exon            1..155
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            156..455
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             188..1837
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="isoform 2 is encoded by transcript variant 8;
                     protein ITFG3; protein FAM234A"
                     /codon_start=1
                     /product="protein FAM234A isoform 2"
                     /protein_id="NP_001387181.1"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
                     /translation="MMDNKDLEAEIHPLKNEDKKSQENPGNLPRNEDNLKSKPVPSRL
                     SRCRTVAFFLSLFTCLFVVFVLSFIIPCPDRPSSQGTWKLDYNNAVMYDFLALGDINK
                     DKVQDVLFLYKNTNSSNNLTRSCADEGFSTPCAFVVAVSGANGSVLWERPVAQDVALV
                     KCAMPQTLDSDEVSSACIVVGRAGSFVAVSFFTGETLWSHPSSFSGNVSILSPLLQVP
                     DIDGDGDGTPDLLILAQEGQEVSGALYSGSTGYQIGHRGSLGVDGDGVALLHVTRTGA
                     QYILLPCASALCGFSVKSLYERITGRDGHFKEDPYWENMLNHSVHRRLLHRLGAVRYL
                     MNIPGKAGQDLLLVTSEACVLLDGQDLEPRWTLGEVQVLRKPILGHYKPDTLAVVIEN
                     GTSIDRQILLLDLSTGSILWSQPLPSLPGGPPSTSLMTADHRSAFFFWGLHDLDPPDV
                     QHSLYMFHPTLPGILLELANVSANIVAFDAVLLEPSRHAAYVLLTGPASSDVPGLVSV
                     TKHKVQDLVPGSRVIHLGEGSSDSDQAIRDRFSRLRYRSEM"
     exon            456..572
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            573..767
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            768..904
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1037
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1167
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1308
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1384
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1385..1522
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..1625
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1626..2644
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2598..2603
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="hexamer: AATAAA"
     polyA_site      2644
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="major polyA site"
ORIGIN      
        1 gctgtccggc gtagtctgta ctcctgttca gccgctgtcc tcccgggaac cttggggatg
       61 tggatcccgg attccaggga ccgcagttga gccagcctcg ccagtcctgt accacttgct
      121 gaggagcagg atctcgcgga caggtccgag agcagtggcc acagttaagc tctggaatgt
      181 gctcaggatg atggacaaca aggacttaga agctgaaata caccccttga agaatgagga
      241 caagaaatca caggaaaacc caggaaacct accaagaaac gaagataact tgaagagcaa
      301 gcctgtgcct tcccgcttgt cccggtgccg cacagtggca tttttccttt ccctgttcac
      361 ctgcctcttc gtggtgtttg tcctgtcttt catcatccca tgtccagacc gtccctcctc
      421 acagggcacg tggaagcttg actacaacaa tgcagtcatg tacgacttcc tggctctggg
      481 agacataaac aaggacaagg ttcaggacgt tctttttctt tacaaaaata ccaacagcag
      541 taacaatctc accagatcct gtgctgatga aggcttttcc actccttgtg cctttgtggt
      601 tgcggtgtca ggagccaatg gcagcgtgct ctgggagaga cccgtggccc aagatgtcgc
      661 ccttgtaaag tgtgccatgc cacagacact ggacagtgac gaggtgtctt ctgcctgtat
      721 cgttgtggga agagctggtt ctttcgttgc ggtcagcttt tttacaggag aaaccctgtg
      781 gagccatccc agcagcttta gtgggaacgt ttccatcctg agccctctgc tccaggtgcc
      841 tgacattgat ggtgatggtg acggtactcc agacctcctg atcctcgccc aggagggaca
      901 ggaggtcagt ggagctctct attcaggtag cactgggtac cagattggcc acagaggcag
      961 ccttggtgtg gatggagatg gtgtcgccct ccttcatgtg accagaactg gtgctcagta
     1021 tattctcctg ccctgtgcaa gtgccctctg tggcttctct gtgaagagtc tctatgagag
     1081 aattactggg cgagatggcc attttaagga agacccctac tgggagaaca tgctcaatca
     1141 ctctgtccac aggaggcttc tgcacagact tggagcagtt cgctacctga tgaatatccc
     1201 agggaaagct ggccaggact tgctccttgt gacctctgag gcctgcgtgt tgctggatgg
     1261 acaggatctg gagcccaggt ggacccttgg tgaagttcag gttctgagaa aacctatcct
     1321 tggccactac aaacctgaca ccttggctgt ggtcattgag aatggaacca gcattgatag
     1381 acagatccta cttctggacc tcagtactgg gtctatcctg tggagccagc ccctcccaag
     1441 cctgcctggg ggcccaccat ccacaagcct gatgactgca gaccaccgct cagccttctt
     1501 cttctggggc ctccatgatc ttgatccccc ggatgtgcag cacagtctgt atatgttcca
     1561 cccgaccctg cctggcatcc tgctggagct agccaacgtg tctgccaaca tcgtggcctt
     1621 tgatgccgtc ctgcttgagc caagccgcca tgctgcctat gtgctcctga cgggcccagc
     1681 aagctcagat gtgcctggcc tggtctctgt caccaaacac aaagtgcaag accttgtccc
     1741 aggcagtaga gtgatccact tgggtgaagg cagctcagac agcgaccagg ctatccggga
     1801 ccggttctcc cgactacggt accggagtga gatgtaggtg ttgtcggctg gagcacacgg
     1861 agagattcca actgtgaaaa ggaagcctct tggaaagctg gcctgctctc ggccttcatg
     1921 ctgacctcac tgctcgccct gatgattcgg gccctctgga gctatggcct taccagttct
     1981 acccaggatg ttgagagtgg ggggcacctt ccagcctcct gcccatacca tgtcctccct
     2041 caaaggtctc actgcgtggc ccactgatct ggtcaagtaa ggctccctgg gctggcttgg
     2101 gcaaggcagc ccacaggagg ctcatttatc acttcctgcc tccttaccct ctcccaggaa
     2161 agccaccact gtgtgctgtg ctgctcccta gtccctctca ggccagcctg gctttcccca
     2221 tttcggcact gtccctcagg ggtcacgaaa ctcagggctg tagctggaac ctgaggcttg
     2281 gaagctgctt ccccacagca gaagggagca tgtctcctgg aaagcgagca accctgagtc
     2341 tgaccagagc ctccgggtgc gagggatttc cagactgtac gctgagtcag tccttcgcct
     2401 cagtacactg tccctgcacc ctggcacagc gggcacgtct ctttccctac tctggtgctt
     2461 atctgatggc ggtctcacct tgtgccttgt ttgttgttcc tgaagcccaa gggcaacaga
     2521 gcagctttgc ccagatcaca tccatagctc tgtagccaaa gcagtcccat gaccccagcc
     2581 accatggaaa ccaacacaat aaacgatttg cactgatggg gaaagccccc gtagtccagc
     2641 gtga
//
