LOCUS       NM_001400251            2678 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 234, member A
            (Fam234a), transcript variant 7, mRNA.
ACCESSION   NM_001400251 XM_006523390
VERSION     NM_001400251.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Gineste,C., De Winter,J.M., Kohl,C., Witt,C.C., Giannesini,B.,
            Brohm,K., Le Fur,Y., Gretz,N., Vilmen,C., Pecchi,E., Jubeau,M.,
            Cozzone,P.J., Stienen,G.J., Granzier,H., Labeit,S.,
            Ottenheijm,C.A., Bendahan,D. and Gondin,J.
  TITLE     In vivo and in vitro investigations of heterozygous nebulin
            knock-out mice disclose a mild skeletal muscle phenotype
  JOURNAL   Neuromuscul Disord 23 (4), 357-369 (2013)
   PUBMED   23375831
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126438.3.
            
            On Jan 20, 2022 this sequence version replaced XM_006523390.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.574031.1,
                                           ERR2680377.1038449.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-171               AC126438.3         61092-61262
            172-471             AC126438.3         84672-84971
            472-588             AC126438.3         86501-86617
            589-783             AC126438.3         86934-87128
            784-920             AC126438.3         87822-87958
            921-1053            AC126438.3         88561-88693
            1054-1183           AC126438.3         88934-89063
            1184-1324           AC126438.3         89927-90067
            1325-1400           AC126438.3         90525-90600
            1401-1556           AC126438.3         90769-90924
            1557-1659           AC126438.3         91346-91448
            1660-2678           AC126438.3         91535-92553
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 13.07 cM"
     gene            1..2678
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="family with sequence similarity 234, member A"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
     exon            1..171
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            172..471
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             204..1871
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="isoform 1 is encoded by transcript variant 7;
                     protein ITFG3; protein FAM234A"
                     /codon_start=1
                     /product="protein FAM234A isoform 1"
                     /protein_id="NP_001387180.1"
                     /db_xref="GeneID:106581"
                     /db_xref="MGI:MGI:2146854"
                     /translation="MMDNKDLEAEIHPLKNEDKKSQENPGNLPRNEDNLKSKPVPSRL
                     SRCRTVAFFLSLFTCLFVVFVLSFIIPCPDRPSSQGTWKLDYNNAVMYDFLALGDINK
                     DKVQDVLFLYKNTNSSNNLTRSCADEGFSTPCAFVVAVSGANGSVLWERPVAQDVALV
                     KCAMPQTLDSDEVSSACIVVGRAGSFVAVSFFTGETLWSHPSSFSGNVSILSPLLQVP
                     DIDGDGDGTPDLLILAQEGQEVSGALYSGSTGYQIGHRGSLGVDGDGVALLHVTRTGA
                     QYILLPCASALCGFSVKSLYERITGRDGHFKEDPYWENMLNHSVHRRLLHRLGAVRYL
                     MNIPGKAGQDLLLVTSEACVLLDGQDLEPRWTLGEVQVLRKPILGHYKPDTLAVVIEN
                     GTSIDRQILLLDLSTGSILWSQPLPSLPGGPPSTSLMTADHRSAFFFWGLHDLVSTNE
                     MDPPDVQHSLYMFHPTLPGILLELANVSANIVAFDAVLLEPSRHAAYVLLTGPASSDV
                     PGLVSVTKHKVQDLVPGSRVIHLGEGSSDSDQAIRDRFSRLRYRSEM"
     exon            472..588
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            589..783
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            784..920
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1053
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1054..1183
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1184..1324
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1400
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1401..1556
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1557..1659
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1660..2678
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2632..2637
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="hexamer: AATAAA"
     polyA_site      2678
                     /gene="Fam234a"
                     /gene_synonym="Itfg3"
                     /note="major polyA site"
ORIGIN      
        1 gctgtccggc gtagtctgta ctcctgttca gccgctgtcc tcccgggaac cttggggatg
       61 tggatcccgg attccaggga ccgcagttga gccagcctcg ccagtcctgt accacttgct
      121 gaggagcagg atctcgcgga caggtccgag agcaggtcag gatcggacta gtggccacag
      181 ttaagctctg gaatgtgctc aggatgatgg acaacaagga cttagaagct gaaatacacc
      241 ccttgaagaa tgaggacaag aaatcacagg aaaacccagg aaacctacca agaaacgaag
      301 ataacttgaa gagcaagcct gtgccttccc gcttgtcccg gtgccgcaca gtggcatttt
      361 tcctttccct gttcacctgc ctcttcgtgg tgtttgtcct gtctttcatc atcccatgtc
      421 cagaccgtcc ctcctcacag ggcacgtgga agcttgacta caacaatgca gtcatgtacg
      481 acttcctggc tctgggagac ataaacaagg acaaggttca ggacgttctt tttctttaca
      541 aaaataccaa cagcagtaac aatctcacca gatcctgtgc tgatgaaggc ttttccactc
      601 cttgtgcctt tgtggttgcg gtgtcaggag ccaatggcag cgtgctctgg gagagacccg
      661 tggcccaaga tgtcgccctt gtaaagtgtg ccatgccaca gacactggac agtgacgagg
      721 tgtcttctgc ctgtatcgtt gtgggaagag ctggttcttt cgttgcggtc agctttttta
      781 caggagaaac cctgtggagc catcccagca gctttagtgg gaacgtttcc atcctgagcc
      841 ctctgctcca ggtgcctgac attgatggtg atggtgacgg tactccagac ctcctgatcc
      901 tcgcccagga gggacaggag gtcagtggag ctctctattc aggtagcact gggtaccaga
      961 ttggccacag aggcagcctt ggtgtggatg gagatggtgt cgccctcctt catgtgacca
     1021 gaactggtgc tcagtatatt ctcctgccct gtgcaagtgc cctctgtggc ttctctgtga
     1081 agagtctcta tgagagaatt actgggcgag atggccattt taaggaagac ccctactggg
     1141 agaacatgct caatcactct gtccacagga ggcttctgca cagacttgga gcagttcgct
     1201 acctgatgaa tatcccaggg aaagctggcc aggacttgct ccttgtgacc tctgaggcct
     1261 gcgtgttgct ggatggacag gatctggagc ccaggtggac ccttggtgaa gttcaggttc
     1321 tgagaaaacc tatccttggc cactacaaac ctgacacctt ggctgtggtc attgagaatg
     1381 gaaccagcat tgatagacag atcctacttc tggacctcag tactgggtct atcctgtgga
     1441 gccagcccct cccaagcctg cctgggggcc caccatccac aagcctgatg actgcagacc
     1501 accgctcagc cttcttcttc tggggcctcc atgatcttgt gagcactaat gagatggatc
     1561 ccccggatgt gcagcacagt ctgtatatgt tccacccgac cctgcctggc atcctgctgg
     1621 agctagccaa cgtgtctgcc aacatcgtgg cctttgatgc cgtcctgctt gagccaagcc
     1681 gccatgctgc ctatgtgctc ctgacgggcc cagcaagctc agatgtgcct ggcctggtct
     1741 ctgtcaccaa acacaaagtg caagaccttg tcccaggcag tagagtgatc cacttgggtg
     1801 aaggcagctc agacagcgac caggctatcc gggaccggtt ctcccgacta cggtaccgga
     1861 gtgagatgta ggtgttgtcg gctggagcac acggagagat tccaactgtg aaaaggaagc
     1921 ctcttggaaa gctggcctgc tctcggcctt catgctgacc tcactgctcg ccctgatgat
     1981 tcgggccctc tggagctatg gccttaccag ttctacccag gatgttgaga gtggggggca
     2041 ccttccagcc tcctgcccat accatgtcct ccctcaaagg tctcactgcg tggcccactg
     2101 atctggtcaa gtaaggctcc ctgggctggc ttgggcaagg cagcccacag gaggctcatt
     2161 tatcacttcc tgcctcctta ccctctccca ggaaagccac cactgtgtgc tgtgctgctc
     2221 cctagtccct ctcaggccag cctggctttc cccatttcgg cactgtccct caggggtcac
     2281 gaaactcagg gctgtagctg gaacctgagg cttggaagct gcttccccac agcagaaggg
     2341 agcatgtctc ctggaaagcg agcaaccctg agtctgacca gagcctccgg gtgcgaggga
     2401 tttccagact gtacgctgag tcagtccttc gcctcagtac actgtccctg caccctggca
     2461 cagcgggcac gtctctttcc ctactctggt gcttatctga tggcggtctc accttgtgcc
     2521 ttgtttgttg ttcctgaagc ccaagggcaa cagagcagct ttgcccagat cacatccata
     2581 gctctgtagc caaagcagtc ccatgacccc agccaccatg gaaaccaaca caataaacga
     2641 tttgcactga tggggaaagc ccccgtagtc cagcgtga
//
