LOCUS       NM_001159583            3358 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus family with sequence similarity 219, member A
            (Fam219a), transcript variant 1, mRNA.
ACCESSION   NM_001159583
VERSION     NM_001159583.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL831723.9.
            
            On Dec 13, 2019 this sequence version replaced NM_001159583.1.
            
            Transcript Variant: This variant (1) encodes isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134737.1, BC147810.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-362               AL831723.9         95186-95547         c
            363-411             AL831723.9         50375-50423         c
            412-514             AL831723.9         47876-47978         c
            515-595             AL831723.9         47621-47701         c
            596-650             AL831723.9         46921-46975         c
            651-3358            AL831723.9         43700-46407         c
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 21.71 cM"
     gene            1..3358
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /note="family with sequence similarity 219, member A"
                     /db_xref="GeneID:71901"
                     /db_xref="MGI:MGI:1919151"
     exon            1..362
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            363..411
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            412..514
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            515..595
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            596..650
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            651..3358
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3337..3342
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3358
                     /gene="Fam219a"
                     /gene_synonym="2310028H24Rik"
                     /note="major polyA site"
ORIGIN      
        1 agagtcaccg cagtggctga gctgctgaca ggaggcggcg gcggaggagg aggcgaggca
       61 agacctgcgg ctccgcgggg ctactgccgc ggtagctcta ggcaacccca cggagctacg
      121 ccggtctcag tcatcccgcg agcctctcgc cgcctatcca tccttccatc cgcctatccg
      181 cccgaccggt ccagggcggc ctagtctgca taatctgccg ggcttctggg gccgccgccc
      241 cgcgcggtcc catcggcgtc cctggccgcg cccggcccct ggcccgctcg cccgccggca
      301 ccatgatgga ggagatcgac cggttccagg tgcccaccgc gcactcggag atgcagccgc
      361 tggatccagc cgcagcctct atctcagacc gagactgtga cgcccgggag gagaagcaac
      421 gggagctggc ccggaagggt tccctgaaga acggcagcat gggcagccct gtcaaccagc
      481 aacccaagaa gaacaacgtc atggcccgga cgaggctggt cgtccctaat aaaggctact
      541 cctcgctgga ccagagccct gatgagaagc cactggtagc tcttgacaca gacagcgacg
      601 atgactttga catgtccaga tactcttcct ctggctactc ctctgccgag cagatcaacc
      661 aagatttgaa catccagctg ctgaaagatg gctaccggtt agacgagatc cccgacgacg
      721 aggacctaga tctcatcccc cccaagtctg tgaaccccac ctgcatgtgt tgtcaggcca
      781 cttcctccac cgcctgccac attcagtagt gggcggggtc gccgcggtgc acggggcgct
      841 gacctgggcc cggtgggatg cagcaggaga gacccctacc ctgctggtcc actggtcccc
      901 agccccgcgc ctcttagagc cgccaacctc gtaacagtca ttgcttcctc ctatggtagg
      961 acgtgtacct ctgtgtgttc aaggagccgg agaaaccaaa accgggtctg tctccagccc
     1021 cggggctgag gaggggtggg cactgtttgt tcggttactt ggggggaacc acacccaagc
     1081 accctgccac ctctcctata gctgcagtca ggggggcagc actgaaggcc aggaggccaa
     1141 atgtaagcgt tgggtgaagg gatcacaggg ccggaaggtt ggccccagcc agtgaagcca
     1201 tgaatccccc ccaagcccgg cttggaaagg aaggaaaggg gttttgagaa gaaaaggatc
     1261 caagcaatgg gggcagttct cacacctcag agcccctctc cccaaaccct gtgccagccc
     1321 atatacctat ttgtgttttc ccctcatctc cagatgggaa gcctggcagc gctgtccaaa
     1381 gggatactgt ctctccatta gataactcct tccactgtct ccctcccccg ctttcttact
     1441 ttctgagggt tgggaaggta agatgggcct tagagagaag ccaggtttgg ggatggtatg
     1501 acctgttctc accggtctct aaccagtgca tctgtctctc tgcctcatcc ccacaccgcc
     1561 ctgccacccc cagtcttctg tctattggtt ccaggctgga agcaagagat aaggctggcc
     1621 tcctgtgccc cattgccatt tcaccctagc tcaaagtcca ggagccaggc ttccagaaag
     1681 gctcttcaag agcaagctta aggaaataca gtgagccaag tggctgtatg atatggtatg
     1741 gtatggtatg gtatggtatg gtatggtatg cacatgtgtg tgcatgtgtg tgtgcctgtg
     1801 tgtgtgcgtg tgcgtgtgtg tatgtgtgtg cgtgtgtgtg tgtgtgtgtt gtacccgagt
     1861 gtgtgttgag cctatctgtc cagggaacca gattggtgtc cgagatgagg aaatggctgt
     1921 ggcctgggaa atcagtgaga ggccgcttgg gaatgagaat gcagtggact gaaagcacag
     1981 cctggccatc tggaacctgg gttctggtcc cagcctcggc attctccctg agctcctaag
     2041 caattcccag gcttctctag ggcttcagtt ctcacaactg gaaaataaag agtagctgac
     2101 atcaccgaca gagtcttttc ataccagaag gaatttcttc acaggagttt ctgcaaaaga
     2161 ctatgacatc tgtgtgtctg tggtctcacg aggtacctgg aggtgtatgt gcacggacat
     2221 gggaagtacg tgaagattta tttcgggaaa agtggtgtgt gtgtagctgt actgggtgtc
     2281 atgtatgctg ttgcttctgc tgctggtctg gtctgaggga ggaaagctga ggctgtagct
     2341 cagtgagatg gtggctctcc catggctgaa gacaagtgca agcagagaga gcctcaggct
     2401 gctgggcctc ggacccacga gcctcctctc actgagccag tgcggccaga gtgtctctcc
     2461 ttcaggcgcc ccacatgcca gcatttccac cctctggatt ctcctcacat gtcactctcc
     2521 aggtgccggg gcctagagtg ggcgtgtgag aaggaggagt ggggctgttg gcttaggaag
     2581 ggaagcgcct ctctgtacac cacaaccagg agctgcccac tccccacacc tccagcccag
     2641 cttacctccc cctagtacag agatcctaat tagataagaa aatgccaagg gaggcaagcc
     2701 agagaaagca tctgcagggg ccacaggccc atggtggccc catctgagcc ccctctccca
     2761 ccccagttcg catccccacc actcatcatc tgggccccaa cgctagaact ccccccaccg
     2821 catccccact gggctctttg actcaccctt ctagaacatg ggtgcctcct ctctttagac
     2881 tgctgccttt gcctctgact tcctgtggga ttgagagcca agggccagtg cccttgtgag
     2941 cgcactagtt ccgaagcagg caagggcatt aggtggtata tacatagcgg gtaggggtag
     3001 gaagctggca gcctgcagct tccaagtcca aggagagcac acagttccct ccttccctgc
     3061 ctggaagttg aaggggaaga gccagggcct cagcttgaca ccccccaccc cgcttccccc
     3121 ctccccccca ctcccccacc ccttgtagat actgccttaa cactccccca cccttggctg
     3181 cggctgctac ccagccaggt ttcttcgagc tcactaattt atttccaaga aggtgtgtgg
     3241 aagacatgag ccgtgtataa tatttttttt ttaacatttc catcgcagta ttgaccatca
     3301 gccttggttg tgtatcgtgt aacacaaaat aatgatatta aaagcatcaa acaagcca
//
