LOCUS       XM_006532724            1628 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus FAM20A, golgi associated secretory pathway
            pseudokinase (Fam20a), transcript variant X1, mRNA.
ACCESSION   XM_006532724
VERSION     XM_006532724.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532724.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..1628
                     /gene="Fam20a"
                     /note="FAM20A, golgi associated secretory pathway
                     pseudokinase; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 56 ESTs, 47 long SRA
                     reads, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:208659"
                     /db_xref="MGI:MGI:2388266"
     CDS             16..1254
                     /gene="Fam20a"
                     /codon_start=1
                     /product="pseudokinase FAM20A isoform X1"
                     /protein_id="XP_006532787.1"
                     /db_xref="GeneID:208659"
                     /db_xref="MGI:MGI:2388266"
                     /translation="MRSQNGRHKIYKEQFNLTSLDPPLQFRPEASWVQFHLGINSHGL
                     YSRSSLAISKLLHDMRHFPTISADYSQDEKALLGACDCSQIVKPSGVHLKLVLRFSDF
                     GKAMFKPMRQQREEETPEDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRLVNVT
                     KEILEVTKNEILQSVFFVSPANNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSL
                     NLAPRLSVPNPWIRSYSLSGKEEWELNPLYCDTVKQIYPYNSSNRLLGIIDMAVFDFL
                     IGNMDRHHYEMFTKFGDDGYLIHLDNARGFGRHSQDEISILAPLAQCCMIKRKTLLHL
                     QLLAQADYRLSDVMRESLLEDQLSPVLTEPHLLALDRRLQIILKTVEDCIEAHGERRV
                     IAEGSAQRSAPDSGQANLTS"
ORIGIN      
        1 agaacagatc tgggaatgag gtcacagaat ggacggcaca agatatacaa agaacaattc
       61 aaccttacct ccttggatcc cccgctccag tttcgaccag aggccagctg ggtccagttc
      121 cacttgggga tcaacagcca cgggctgtac tccaggtcca gccttgccat cagcaagctc
      181 ctccatgaca tgagacactt ccccaccatc agtgctgatt acagccagga tgaaaaagcc
      241 ttgctagggg cctgtgactg ctcacagatt gtgaaaccca gtggggtcca cctgaaattg
      301 gttctgaggt tctcggactt cgggaaagcc atgttcaaac ccatgagaca gcagcgagag
      361 gaggagacgc ctgaggactt cttctatttc atagactttc agagacacaa tgctgagatc
      421 gcagctttcc acctggacag gattctggac ttccgacggg taccgccaac agtagggagg
      481 ctagtgaatg tcaccaagga aatcctagag gtcaccaaga acgagatcct acagagtgtg
      541 ttctttgtgt ctccagctaa caacgtgtgc ttcttcgcca agtgtccgta catgtgcaag
      601 accgagtacg ctgtctgtgg caacccacac ctgctggaag gctccctctc cgccttcctg
      661 ccatccctca acctagcccc cagactgtct gtgcccaacc cctggatccg ttcctactcg
      721 ctgtcaggaa aagaggagtg ggagctcaac cccctttact gtgacacagt caagcagatc
      781 tacccgtaca acagcagcaa cagactcctc ggcatcattg acatggccgt ctttgacttc
      841 ctgattggaa atatggaccg acaccattat gagatgttca ccaaatttgg ggatgatgga
      901 taccttattc atcttgacaa tgccagaggg ttcggacgac attcccagga tgaaatctct
      961 atcctcgccc ctctagcgca gtgttgcatg atcaaaagga aaacactctt gcaccttcag
     1021 ctgctggctc aggctgacta caggctcagc gacgtgatgc gggagtcact tctagaagac
     1081 cagctcagcc ctgtcctcac agaaccccac ctcctggccc tggaccgcag actccagatc
     1141 atcctgaaga ccgtggagga ctgcatagag gcccacggcg agcgaagagt catagccgaa
     1201 gggtcagcac aacgttcggc tccagactcc ggccaggcta atctgacgag ctaatggcaa
     1261 caaacgtggg acctcagaac acacaactgg agtcagcacc tcatgctggt ttgtaggccc
     1321 ctgttgcccc attccatcct ggggcactgg aggccaaggc acaagctcag ggaggaggca
     1381 ggaacgcttt gaaaaaggca aacgggatcc actgaacctc atctttatcc ttgggtggag
     1441 gtcactgctt ttacggtgca ctggctgggg ctctctcttc ccaacgagct ctggctccat
     1501 caggactgca gattatcttc tgagcacact gtgaaacctg gatctggacc aggcttggaa
     1561 ggtttggaag ctctgttccc aggagcggtt tttattctac catatcaaat aaagggacat
     1621 caagcgga
//
