LOCUS       NM_001358273            1627 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 204, member A
            (Fam204a), transcript variant 4, mRNA.
ACCESSION   NM_001358273 XM_006527446
VERSION     NM_001358273.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102553.8.
            
            On Nov 23, 2017 this sequence version replaced XM_006527446.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV058168.1, SRR5189670.78432.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164138
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                AC102553.8         64598-64655
            59-309              AC102553.8         69995-70245
            310-397             AC102553.8         70722-70809
            398-428             AC102553.8         70939-70969
            429-528             AC102553.8         71160-71259
            529-618             AC102553.8         78537-78626
            619-725             AC102553.8         91223-91329
            726-1627            AC102553.8         91812-92713
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 56.52 cM"
     gene            1..1627
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /note="family with sequence similarity 204, member A"
                     /db_xref="GeneID:76539"
                     /db_xref="MGI:MGI:1289174"
     exon            1..58
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            59..309
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..777
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /note="isoform 1 is encoded by transcript variant 4;
                     protein FAM204A"
                     /codon_start=1
                     /product="protein FAM204A isoform 1"
                     /protein_id="NP_001345202.1"
                     /db_xref="CCDS:CCDS29939.1"
                     /db_xref="GeneID:76539"
                     /db_xref="MGI:MGI:1289174"
                     /translation="MWSGLLPPGLNESDVESDSEDEIKLENPEPSEHNLQEDGKTGSS
                     TKPAVSDFPTGQPETETEADADAYEKCPSGIPLNIWNKFQELHKKNSEQKNSTPRFRQ
                     KKRKRSKKGKLKNEKESHSEQSSNETQWEELTQYFGANDRFEPPVKQKKVEKSGLEKR
                     IDQAVEEWDVEKAEELSNQLATRELGVKIAKAIACHKFVKAKKEAENSQAARKKKKLA
                     WGFEAKKRWETKSNMGYM"
     exon            310..397
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            398..428
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            429..528
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            529..618
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            619..725
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     exon            726..1627
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1296..1301
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /note="hexamer: AGTAAA"
     polyA_site      1314
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
                     /note="major polyA site"
     polyA_site      1536
                     /gene="Fam204a"
                     /gene_synonym="2310065H12Rik; 2610015K05Rik; D19Ertd737e"
ORIGIN      
        1 agaagacacg atgttggcgg ggttctaaga tggccgccga gccgctgttt cctccctgaa
       61 gaaaagatgt ggagtgggct gttacctcct ggactaaatg aaagtgatgt tgaatcagat
      121 tctgaggatg aaatcaaact agagaaccca gaaccttcag aacataattt acaggaagat
      181 ggaaagactg gcagcagtac gaagccagca gtgtcagact tcccgacagg ccagccagag
      241 acggagacag aggctgatgc ggatgcatat gagaagtgtc cttctgggat tcccttaaac
      301 atatggaata aatttcaaga attgcataaa aaaaattctg aacagaaaaa ttcaacgcca
      361 agattcagac agaaaaaaag aaaacgctcc aaaaaaggca aattgaagaa tgaaaaggaa
      421 tctcacagtg agcagtcctc aaatgagacc cagtgggaag agcttactca gtattttgga
      481 gccaatgata gatttgaacc ccctgttaaa cagaaaaaag ttgagaagtc aggccttgag
      541 aagaggattg accaggctgt ggaggagtgg gatgttgaga aggcggagga gctcagcaac
      601 cagctggcta ctcgagagct cggtgtaaaa attgccaaag caattgcctg ccacaagttt
      661 gttaaagcca aaaaggaggc tgaaaattca caggctgctc gaaagaagaa gaaactggca
      721 tgggggtttg aagcaaagaa gagatgggaa accaaaagca acatgggata tatgtgacct
      781 tgcagagttc ttcaagacat ttatttatag gctgtcatgc ttcatttgct gaaaaaaatt
      841 tttctgctta ggttaaatat gtcaggaaat tgataaagac agaaaaagat aagcataaaa
      901 cttcagagct gattatcatc cttttcagtc tttttttctc agaagttttt gaaggaaaag
      961 aattttttta tatttgtgta agaaatttta agcatatata caagaaaaaa gggtagggtt
     1021 ttatttattt gtttatataa gcatacagtt taaaatcagt tttgtgtttg atctgtttgg
     1081 tctagcatag ccagtgactt ggcttcctta tctgttctta gcatgactgt actttttcta
     1141 ggattgtatt tttaagattg gctttgttta tagtggattg atcataaata gaattttcaa
     1201 ttgttactaa ttttacaaat aattttaatt actgtaatgc tttaaaaata attactgatt
     1261 cttttttaga ggtaaaatta atattactta gtaacagtaa aagcagttga tttatttttt
     1321 ttgtgtgtgt gtgtaatgtc agtggaaata attagagtaa aagatggaca tagtatctgg
     1381 agaatgattt aaattcagat ttgcttagaa aatgcctttc tccatatctc aaccatgtca
     1441 ttctctatga ttatttatga aaaggaaatg gtctgattgt gctagacaga cagttgtaac
     1501 tcaagataac ataactttgg attgtcttgt tttggattgg cttgtttgtt ttacaccccc
     1561 cacccccacc ccacccctgt cactccttgg aggatggaat gaattaatga gacaaaagag
     1621 agaactg
//
