LOCUS       NM_175514               5686 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 171, member B
            (Fam171b), mRNA.
ACCESSION   NM_175514 XM_913763
VERSION     NM_175514.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5686)
  AUTHORS   O'Neil,S.D., Racz,B., Brown,W.E., Gao,Y., Soderblom,E.J., Yasuda,R.
            and Soderling,S.H.
  TITLE     Action potential-coupled Rho GTPase signaling drives presynaptic
            plasticity
  JOURNAL   Elife 10, e63756 (2021)
   PUBMED   34269176
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5686)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 5686)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772301.7 and AL772256.15.
            
            On Mar 11, 2019 this sequence version replaced NM_175514.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK052508.1, BC113787.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-366               AL772301.7         165272-165637
            367-600             AL772256.15        20365-20598
            601-693             AL772256.15        22432-22524
            694-849             AL772256.15        25213-25368
            850-1020            AL772256.15        27402-27572
            1021-1137           AL772256.15        43666-43782
            1138-1261           AL772256.15        45151-45274
            1262-5686           AL772256.15        46105-50529
FEATURES             Location/Qualifiers
     source          1..5686
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.33 cM"
     gene            1..5686
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /note="family with sequence similarity 171, member B"
                     /db_xref="GeneID:241520"
                     /db_xref="MGI:MGI:2444579"
     exon            1..366
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             138..2603
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /note="protein FAM171B"
                     /codon_start=1
                     /product="protein FAM171B precursor"
                     /protein_id="NP_780723.1"
                     /db_xref="CCDS:CCDS16182.1"
                     /db_xref="GeneID:241520"
                     /db_xref="MGI:MGI:2444579"
                     /translation="MARLCRRVPCALLLGLAAVLLKARLVPAAARAELSRSDLSLIQQ
                     QQQQQLQEQKQREEAEEGRPEVPGASSTLVAPVSVFMLKVQVNDIVSRQYLSQAVVEV
                     FVNYSKTNSTVTRSNGAVLIKVPYQLGLSLTIVAYKDGYVLTSLPWKTGRMPIYSSVT
                     LSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKAFIKLPDNHHISNVTGYLTVL
                     HQFLKVDSFLPATGVTYKSGLENVELTPHAAICVKIYSGGKELKVDGSIHVSLPLLHT
                     SNIKIGDRIPAWTFDMNAGVWVHHGWGTVKEHNSHLIWTYDAPHLGYWIAAPSPATLD
                     FGINDDFQDITAYHTVFLTAILGGTIVIIIGFFAILLCYCRGKCATPQKRERNITKLE
                     ILKRDQTTSTTHINHISSVKTALKAEDKPQLFNAKTSSYSPQRKETTKTEAEERISMV
                     KTRDNFKIYNEDVSFLSVNHNYSRNPTQSLEPSMGSKQPKHINNNLSPSLGDAQEEKR
                     YLTGTEEVYGRSHIPEQLMHIYSQPIAILQTSDLFSMPEQLHAAKSATLPRKGQLVYG
                     QLMEPVNRENFTQTLPKMPMHSHVQAPDAREEDIVLEGQQSLPSQTSDWSRYSNSLLE
                     SVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPPHPRAWFVSLDGKPVAQVRHS
                     FIDLKKGKRTQSNDTSLDSGVDMNEHQSSRKLEREKTFIKSMHQPKILYLEDLDLSSS
                     ESGTTVCSPEDPALRHILEGGSGVIIEHPGEESPGRKSTVEDFEANTSPTKKRGRPPP
                     LAKRDSKTNIWKKREERPLIPLN"
     exon            367..600
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            601..693
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            694..849
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            850..1020
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1137
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1138..1261
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1262..5686
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5618..5623
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      5638
                     /gene="Fam171b"
                     /gene_synonym="D430039N05Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctcctcctgc cgaggctgtg caccgcagac ggcgcgaggg ggagcgagcg agcgggcgcg
       61 gccgggttcc gcagccctgg cgcccgccgc ctcccgcagc cccgcaatat gcctccgtgg
      121 ctccctggct cttcgccatg gcgaggctct gccgtcgcgt cccctgcgcc ctgctcctcg
      181 gcctggccgc tgtgctgctg aaggcgcggc tggtccccgc ggccgctaga gccgaactca
      241 gtcgctccga cctcagcctc atccagcagc agcagcagca gcagctgcaa gagcaaaagc
      301 agcgggagga ggcagaggag gggaggccgg aggtgcctgg ggcatcctct actttggtgg
      361 ctccagtgtc cgtatttatg ctgaaagtcc aggtcaatga catcgtcagt cgccagtacc
      421 tgagccaagc cgttgtggag gtgtttgtta actactcgaa gacgaattct acagtcacca
      481 gaagcaatgg agcagtattg ataaaagtac cctatcagtt aggactcagc ttaaccatcg
      541 ttgcttacaa agatggctac gtcttgacat ctctgccgtg gaaaactgga aggatgccaa
      601 tatattcttc agttacactt tcactgttcc cgcaaagcca agcaaatata tggctctttg
      661 aagacaccgt tttgattaca ggaaaattag ctgatgccaa atctcaacca agtgttcagt
      721 tttcaaaagc cttcattaaa cttcctgaca accatcacat cagcaacgtg actggctatc
      781 taacagttct acaccagttt ttaaaggtgg acagttttct gcctgcgact ggagtcactt
      841 ataaatcagg tttggaaaat gttgagttga ctcctcatgc tgcaatatgt gtgaaaatat
      901 attctggagg gaaagaatta aaggtggatg gctctatcca tgtttctctt ccccttctac
      961 atacaagtaa tataaaaata ggagatcgga tacctgcttg gacatttgat atgaatgcag
     1021 gtgtttgggt gcatcacggt tggggaacag tcaaggagca taacagtcat ttgatttgga
     1081 cctatgatgc accacatttg ggctactgga tagcagctcc atccccagcc actctagatt
     1141 tcggcataaa tgacgatttc caagacatca ctgcctacca cacagtgttc cttacagcca
     1201 tattaggggg gacgatcgtc atcatcattg ggttttttgc tatactgctt tgttattgca
     1261 ggggaaaatg tgcaacacca cagaaaagag aaagaaatat cacgaagctt gagatcctca
     1321 agagagatca gacaacctcg acaacacata taaatcatat cagttcagtc aagactgcat
     1381 taaaagctga agataaacca cagttgttca atgccaaaac ttcctcctac agtccccaga
     1441 gaaaggaaac cacaaaaacg gaggcagaag aaagaatttc catggtgaaa actcgggaca
     1501 actttaaaat ctacaatgaa gacgtttcct ttctgtcagt caatcacaat tattcaagaa
     1561 acccaacaca gtctttggag cccagtatgg ggagcaaaca gcctaagcat attaacaaca
     1621 atctctcccc gtcgctaggt gacgctcaag aggaaaagag ataccttaca gggaccgaag
     1681 aggtctatgg gcggtcccac attcccgagc agctcatgca catctacagc cagcctattg
     1741 ccatccttca gacatcagac cttttctcca tgccagagca gttacatgcc gctaagtctg
     1801 ccactttacc aagaaaggga caattggtct atggccaatt gatggaacca gtgaacagag
     1861 agaactttac acaaacattg cccaaaatgc cgatgcattc tcacgtccag gccccagatg
     1921 ccagagaaga agacattgta cttgaaggtc agcagagctt gccatcccag acctcagatt
     1981 ggagccgata ttccaacagc ttgttggagt ctgtgtctgt tcctggaact ctaaatgaag
     2041 ctgtggtgat gacccccttt tcatcggaac ttcaaggaat ttcagagcag accctcctgg
     2101 agctgtccaa aggcaagcct ccgcatccca gggcttggtt tgtgtctctt gatggaaagc
     2161 ctgtggccca agtgagacac tcctttatag acctgaaaaa aggcaagaga acccagagca
     2221 atgatacgag tctagactct ggggtggata tgaacgagca tcagtcaagc agaaagctgg
     2281 agagggagaa aacgttcatc aagagcatgc atcagcccaa gatcctttac ctggaagact
     2341 tagacctgag cagcagcgag agtggaacca ccgtctgctc ccccgaggat cccgcattga
     2401 ggcacatctt agaaggggga agcggggtta ttatcgagca ccccggggaa gagtctccag
     2461 gaaggaaaag cactgtggaa gattttgaag ccaacacatc ccccactaaa aaacgaggcc
     2521 ggccaccgcc actagccaaa agagatagca agactaacat ctggaagaag cgagaggaac
     2581 gcccactgat tcccctaaac taattgtgag agctgtgtag agctgtgtat ctctgtagtc
     2641 ttctgcttct tgtaaattgc agtgtgaact tcttaggaag ctgggactga gcaatctcat
     2701 gggccataga cacatctcaa gcaaagtgga tggtaaaata ggaattcaga aatcagaaat
     2761 gctttctctg gcctgttcct ctcccccacc cccacccccg ttgttttgtt tttgggtgat
     2821 gaagttatca caatgtaaaa caatgtaaag atgttatctg aaaatgttgc tcagtttgcc
     2881 aactggtact ggctcttaag aatacagctg tgaaatgtgt actacagttg ctttccaaaa
     2941 tcttgcctct gccttgtctt agaaaggcag gtatcttcat catgcctcat cctcgtgcag
     3001 tgggactgtg aaagcgtttc ctgcctatgc ttagaaacaa cctgataaat gtgtgtatgg
     3061 atgttaaaga ccaaaccgca ttttcttatt taagattaat ggcttgtggg ttgttgccac
     3121 caacgtaaat cctgtgctcc cataacatgg gcgggaagcg cccggtttac ttgagaagga
     3181 gacccaattc tagttatttg gggacatagg cttatagagt aaataacata ttgacttgtt
     3241 atatagaaat ttgagaaatg aaaactctga tattgtcttt ttatttcaga tgaagcgacc
     3301 ttagttgaca gctgggcgga ggctttgact tttaaggttc acgaatccat aaaggctgga
     3361 attggttttt aagatgtctt tgtcatctcc cccattccaa atcagtcatt tagagactat
     3421 caagtctgat ttaaaaatac aaaaatttgg aatgccgaaa atgaatagac tgtggagaca
     3481 aagggaaatg gatattctgt ataatcgtgc aggaaaagaa aggccagttt ccagatatta
     3541 aaaaaaaaac aaaaaaaaaa aaaaccaaaa aactccaggc tttgtcaaca ttgctaaatg
     3601 ctgatgcttt ggaacggttg gagaagaaca gcctgggatt ccaggggttg tgttccccgt
     3661 ctcctgagcc tgtgcagctc atttgccagt gtcaggcatt tactactgtt ctctcagtgt
     3721 gaactcagga gctgttttta attactggct ctccactctc ctaaacataa gagctctcga
     3781 gtaccatcaa ccatcctgtt ttacctaaag cttttcacta ggacacattt gtacagcagc
     3841 tcgccctttt ctttgggtgg gaagaaatgg ttcttttcac cccctacctc ctgagcaaat
     3901 tcaagccact taaatatgtt ggaggaaact aaaacagaga cacccgaatt ttgtaaaaca
     3961 gtagatagat aagacaatgg aattcagcag cttttctccc cgagacaaca gacttcagcc
     4021 aggttttgct ataatcactt ctgaaataac ttatctgtct taactccctt ggctttctgt
     4081 atttaaccca aagaatgcaa agacctttgc tatggttctt gtatactacc cctctccatc
     4141 tatgtttggg taacacttag acttactgct ggggggagag tgatacagct cacttttaga
     4201 ggaggctttc atgttggttc tacacagaat tcaatcctaa gcagcatgga catgaacaaa
     4261 aaccgacttg gagaagttta aggagttagt gctctgtgga agtgcctttg actaagactt
     4321 gcgttaggag gattaataac atctttcctc cgtgtacatt ttgttagcca aattaaacag
     4381 atgtgcagtt attaaacaga tgtgcagtta ttaagaggta cagacctagt gtttcacgtt
     4441 ggaacaagga atttttgcat gtaacatttt cttttgcgtg ttgtttctcg aattcacaag
     4501 atactgataa actgtttcta ttggaatgag gttagggacg atatagttaa atgctgcacc
     4561 cggtcaacac tttaagtgtg tatgtatcct caccttaaaa aggcttcatg tctcaactgg
     4621 gcaatgcagt gcacatagaa atgtatgtgt gtatggccca agtacgccag tgacttcgct
     4681 cattcttgtc taagggaaat gagatgaggt atcctaaggg cttttataga attttaattt
     4741 cacaaaatac ttttaaaaac ccactgcgat gctgtttttg gttgggaatg ttaggcagta
     4801 tatctttcct aatcagggga atgtgacttc tcatttgcga gctgttcaca attcctggta
     4861 aaaagctaaa gccatctacc ttttcctaac ccaagtgatt gaaccaacac tactcactac
     4921 tttcttaaag ttttaaattg aaagccaatg cagacttttg catatgtaaa ctagagaatt
     4981 ttggttacaa attgttgata tttgtggatc ctttgtacct agtttggata tatcttgaag
     5041 gcatagctat cagttaaccg atgaagtcgt ttactaaata cagcacagct atgtgcgatt
     5101 ttgaatacat acaaccttga aactttataa agcccatttt tatgactttc tgcaggtgaa
     5161 tagggatcat gcccttttat aattcacagt gtgccacaaa gatcacaaac actgagggat
     5221 actaaagctc ttctttgttt tggcagttac tgtcaggcca gtttctgtgg atttgaatcc
     5281 tccactatta cccattagag tgttttagac atttgggggg ggatatcaaa tactgccctt
     5341 tgaaacttcc cagaaaggta aagctcacaa ctccatgttt atttctatgg cttgagttac
     5401 cctctgctgt gtgcagacat cataaagagg tctacttggt ttcgacctca gatccagagc
     5461 tgacgtcgtg ccctcttgtt cccaggcgtt tccttgttca ttttcctttg tcttctttca
     5521 tcagagaaat ctcatgtttt ggtgtattta ttgctgttac tgtatttctt gaacagtctg
     5581 aagatttgta aaatgttaca aacagttctt taaggataat aaaattaatc taaatgtatg
     5641 cttgtagtgt ttaatttcaa ataaaaggca aagggttcct tcccaa
//
