LOCUS       NM_153535               5479 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 149, member A
            (Fam149a), mRNA.
ACCESSION   NM_153535 XM_907542
VERSION     NM_153535.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5479)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK140440.1, AK141607.1 and BB183041.1.
            
            On Apr 11, 2007 this sequence version replaced NM_153535.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK140440.1, AK141607.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3087              AK140440.1         1-3087
            3088-5469           AK141607.1         3031-5412
            5470-5479           BB183041.1         222-231
FEATURES             Location/Qualifiers
     source          1..5479
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 25.25 cM"
     gene            1..5479
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="family with sequence similarity 149, member A"
                     /db_xref="GeneID:212326"
                     /db_xref="MGI:MGI:2387177"
     exon            1..1139
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     CDS             532..2895
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /codon_start=1
                     /product="protein FAM149A"
                     /protein_id="NP_705763.1"
                     /db_xref="CCDS:CCDS22277.1"
                     /db_xref="GeneID:212326"
                     /db_xref="MGI:MGI:2387177"
                     /translation="MKVAVLDLGSLFAKIFKLSTASPAVSSHPGGAAATGSVDSGAST
                     SLREAETLTLLPSLPPDTAASREPFTPVHTPLPASHPRSSAAAQRVEATGCSGSLPSS
                     SGASIAPPLTPYSGSAGSVASVTLPSPGVDWATLPSVTIPLGSNSVTASSPRNPRQLR
                     APGEREPSVWMAPGPVPKTLFFTLPDIGEEWTSDSDSQDDPEGRGLSEGLRKQSSEKS
                     KDPLPTNFTRNVQKAIDKFASESPSSFSSSGSRTPTEAHNSWPGSSTQSSTTGLSTER
                     SSVSSWRDDEFDKVSAQKVHQLFWEVEELLFEGKVSPQTQNLLAECSEWARRSLHLRV
                     VGRQLVPPTDEGFQHFQGSLPSSATHEALPHVPDHTSSSRELCISGSQIVPEVHSASA
                     LTDPDGTESADLTSCSSLKEEVYHVDGNIEEYFAFDRKQDGDEHLGQSPALRGRKRHR
                     HGLPPISPDDCIRDAVAAEVFDHVWTNVVEILEDLIRKTWESALTGGKKHKEKLKVAE
                     NRSPHVLMSRLSTDVCSVPPSRSSDTLQPSLAPHFNPPQFPQLHRFSSNFYSDLSGVM
                     TIQAKPLQQRPTYSADRTQNDQDDKLPGGGVGASSRHRLGRILDARGPQTSVKKTPVH
                     RRLPSIASDPQRLKTPTVYSDEILRGTKLQTGIDYLPSPAAVQTSRSRLPPIGSETGE
                     PNTAASGSRPVSYRGRHPQSRVFSAMPDSIERSPLRERTIVLEQLSRPSTTHTFRSDT
                     PRKGSLTPVEFVAHTWTGQSILTGSQYLPKSYQRATLTARKRFQVAS"
     exon            1140..1247
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            1248..1386
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1529
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..1655
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            1656..1826
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            1827..2017
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2018..2172
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2173..2285
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2286..2489
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2490..2613
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2614..2742
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2743..2821
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     exon            2822..5479
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3094..3099
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="hexamer: AATAAA"
     polyA_site      3114
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="major polyA site"
     regulatory      3413..3418
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="hexamer: TATAAA"
     polyA_site      3437
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
     regulatory      3600..3605
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="hexamer: ATTAAA"
     polyA_site      3625
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
     regulatory      5460..5465
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
                     /note="hexamer: TATAAA"
     polyA_site      5479
                     /gene="Fam149a"
                     /gene_synonym="mKIAA4166"
ORIGIN      
        1 ggggagctgg tgtttctatt gtggacacag cccagctaca gcctggagtc caattagcag
       61 agagcttagc aggggttttg tttagcttag caaccgcctg tgcagcccca ggggccagcc
      121 agagaatctc cagcgagttt agcccataat ccgtgcatcc aacactagtc ctctccttga
      181 gctctgtgcc cctggtccct tgaacatctt actacactgt gggacaggag ggatttctct
      241 ttgcagaggg taaccagcct ccctctgtcg cctttacatc tgtgggttca ttggagaggg
      301 tctgtcagac ccataaggaa ctaaacgctg aaacaacgga ttcctgtggg tggaaaaaaa
      361 gacctagaag cctcgaggaa gctgtgtgcc aggaccccag gaccctctgc tcgtccccag
      421 agccatctga tccagatcgc tgcagggggt ggtggatgga gccctgcaga ccagcacctg
      481 gtgtccttga cctcccggcg acagtcacag taacctctcc aggaccaagg catgaaggtc
      541 gctgtgttgg acctggggtc tctgtttgcc aagatcttca agctctcaac agcatccccg
      601 gcagtctcca gccaccctgg aggcgcggcg gccacaggat cagtagactc cggcgccagc
      661 acgtcgctta gagaggctga gaccctgact ttgctcccat ctctgcctcc agacaccgcg
      721 gcctcacggg agcccttcac cccggtgcac actccgctcc ctgcctcgca ccccaggagc
      781 tccgcagctg ctcaaagggt agaagcaaca gggtgttccg gatctctgcc cagcagctca
      841 ggagcatcca tagcaccgcc cttaaccccc tacagtggct ctgccggctc agtggcttca
      901 gtgactttac ccagcccagg ggttgactgg gcgaccctgc cttctgtcac catccccttg
      961 ggcagcaaca gcgtcacagc atcaagtcca cggaaccctc gccagctgcg agctcctgga
     1021 gagcgagagc ccagtgtatg gatggccccg ggtccggttc ccaaaactct gtttttcacc
     1081 ttgcctgaca ttggcgagga atggacctcg gacagcgact cccaggatga cccagaagga
     1141 agggggctct cggaaggact caggaagcag agctctgaaa agagcaaaga tcctttacct
     1201 acgaatttta cgagaaacgt gcagaaagcc attgataaat tcgccagcga gtccccctca
     1261 tcattttcat ccagtgggag ccggacgccc acagaggccc acaactcatg gcctggctct
     1321 tctacacaga gctctaccac gggattgtct acggagcgga gctcggtttc ttcttggaga
     1381 gatgatgaat ttgacaaagt cagtgcacag aaagtccacc agctgttttg ggaggttgag
     1441 gaactgctat ttgaagggaa agtgagtccc cagacccaga atctcctggc tgaatgcagc
     1501 gaatgggcaa gaaggtccct ccatctcagg gtggtaggaa gacagctcgt cccacccacc
     1561 gatgaaggct tccaacattt ccaggggagc ctgcctagtt ctgctactca cgaagcttta
     1621 cctcatgtcc ctgaccacac cagcagcagc agagagctgt gtatctctgg ctctcagata
     1681 gtccctgagg tacactcagc ctcagccctg acagaccctg atggcacgga atcggctgac
     1741 ctcacatcat gctcatccct gaaagaagag gtgtaccatg tggatggaaa cattgaagaa
     1801 tattttgcct tcgacagaaa gcaggatgga gatgagcatc ttggacaaag cccagcactc
     1861 cgtggcagga agaggcatcg ccatgggctt cctcccattt cccctgatga ctgcatcaga
     1921 gatgctgtgg cagcagaagt gtttgaccac gtgtggacca atgtggtaga aatcctggaa
     1981 gacctcatta gaaaaacctg ggaatctgca ctcacaggtg ggaaaaaaca taaggaaaaa
     2041 ctaaaagtag ctgagaacag atctccacac gtgctcatgt cccgtctcag caccgatgtt
     2101 tgcagtgtcc ccccatcccg aagctctgat acgctccagc catccttggc tccccacttt
     2161 aacccacccc agtttcctca gctccatcgc ttctccagca acttctacag tgacttgagc
     2221 ggtgtgatga cgattcaagc caaaccactc cagcagagac ccacttattc tgcagataga
     2281 acacaaaatg accaagatga caaactgcct ggaggagggg tcggagcatc ttcccggcac
     2341 cgacttggcc gaattctaga tgcccgaggg ccacagactt cagtcaagaa gacaccagtg
     2401 cacaggagac tgccttcaat tgcctcagac ccacagaggc tgaaaacccc cactgtctac
     2461 agtgatgaaa ttctgagagg aaccaaactg caaactggca ttgactacct gccttcccca
     2521 gcagcagtgc aaacctcccg gagccggtta cccccaatag gctctgagac tggggagccc
     2581 aacacggcag cctcagggtc ccgccctgtt tcttacaggg gaaggcaccc acaaagccgt
     2641 gtgttcagcg caatgcctga cagcatcgaa cggtcacccc ttcgagaaag gaccattgta
     2701 ttggaacagc tttcaaggcc cagcacaaca cacacattcc ggtcagacac acctcgaaaa
     2761 ggctccctga cacccgtgga gtttgtggct cacacttgga cgggtcaaag tattttgaca
     2821 ggttcacagt atctgcccaa atcttatcag agggcaaccc tgactgcaag aaagaggttc
     2881 caagtggcct cgtaatgtta ctgcttcaga attatggact tgctagaagt tatgaagcct
     2941 tggccacacc atctgtcacg tgaaaagcag aggaacaagt actaactgga atatatagtc
     3001 atctccctgg caataggaga cggcagaata cctgagagga acacaagcga ataagtaact
     3061 tggttttgca gacttgtaaa gcattgtaaa gagaataaaa gttgaactcc ctaaccttat
     3121 gagcagcatg cctgatgttc cttgggcttt aggctttgcc taaaagaccc taatgtgccc
     3181 ttaaatttca tatttataat tagtgtttgc acacagatag tattagtgca ttccctaaga
     3241 agatgccatt gtaactctat accattctgt acatttcagt ctcaatcttt tagtgattca
     3301 ttccatcaaa actaagtagc agtcatattt gagacaattt atccatttga gaaatgattc
     3361 aggttcttct attcattgtg ctgactttaa aacaattact gtatattcaa tgtataaagt
     3421 gatgggtttc ataatgacaa gatttttcat atctttgtta tggactgttt agttgtaaat
     3481 atcagagaaa tgtcttataa gacaatcgtg ttaaaatgca atggtaaact agttttctgt
     3541 tgtcaaatgt agacactgct ctaaaaagta gcccacattt aaagatgaat ataagcataa
     3601 ttaaattctt tgcatacgtg tccaacattg gcatttaggt tgacctgttt gacaactgga
     3661 cagaggaatt tgaacatcag aatcctgact tacatcttcc caacctatct ctgctctgat
     3721 gtaacttcct caacacagcc tccctgagcc cttgctgaag gcagcaggtc cttctaccct
     3781 ctgcccttcc cctacaccgg attcttccga ctatattgtc caacctgacc cttacagtca
     3841 ggggagtgaa gaagacaaag aaatgtcagt tggaggccag acccctttct ggtacttatt
     3901 cctgattcat tctcatataa aaacatctta aatcggcata cttttcccct tttaatcaga
     3961 caattatatt acaataatgt gaatgaatct tattaatcta aagggaaatg ttactacata
     4021 cacatttaaa cacatgatag attgttttca ggacatttct tgttataaga agtgagggcc
     4081 attgtctgct tagagatgct tgaaaattga cccctctgtg acgagaagag ttggatctgc
     4141 tctttcatat agaatgacaa atcagaagtg acttcaaacc tttgttccac ttgatagttt
     4201 ctatttcact ctcttcactc cagtttctgc agctatggga catgctaggg acatgctagg
     4261 aaaatcagta gtgatcaggc tgctgtatta atacttcatt ccagttggtc actctaagga
     4321 gtgtgaccct ctttgcctag ggaatgtggt tagggctcag tttctcacac caaagcattt
     4381 ggggctttat ctgaactatt tctcatcata agttatggaa gcacttcaga gaaaatatca
     4441 gtcttcatgc agctgctctc gatgtctgga gagagagtgg ctgccatcct gctcaccagt
     4501 gcctggctgg ctgctctgtg gtccaccatt gctaagagag ctacctactg tgatctcaca
     4561 tccaatcagc tcacttcata tcaatcccta ggtgccatct gatggtttcc tgctcaaccc
     4621 aaagtctgaa aagggtggct cacagcacat ctgacaataa ggtagtgact ccaaaataat
     4681 ttgtttttcc tttcagagag ccaccgaagt gatttcatgg caaccctgct gtgtttgcct
     4741 tcagaggttt gcagttggaa atgtgttcat tgtatcagca aagtaatgga ttaaaaatag
     4801 gaaacaggta caatttttaa tcatttaggc attttgaatg gaaagcaaaa tactcttaaa
     4861 tggtatctaa aaactcagag gtcttgctga atctaaaatc aacctttgcc acgaacttat
     4921 ttccatgact gtgttaaacg tatttcattt ataggtgaaa tgggatgcat acgttagtaa
     4981 attatgcaca tgtaagggtg gtgctgtgta gaccaaaaag ggaagtatca ggggatacaa
     5041 ttttacaata ttctacttcc gtaaatgatt cttatcatag gctgtctggt aaaaattgaa
     5101 aatggaaaat cacttctgag aaaaacattc aaatacaggt tagcgactgc atgaattaag
     5161 ataactgtaa tctatcccaa gccaaagaat gaggggattt taaaaacaat tcaagaaaat
     5221 ataaaattta atgtaaagtg tctagattaa taaaaaatat atctagatag atagatatag
     5281 gtctgaagaa gcatgcatct ttatatttgt gcttatctga acttggatag aatctcttta
     5341 ctagttgaga ggttcatttt ttaatgccat aaatgatttc agtatatttt tactatcgtt
     5401 gttttctaat aacgatggat gattgttcag gagttttaat catttaattt ttaataaaat
     5461 ataaaatgtt aaaaaggtt
//
