LOCUS       NM_029528               4108 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus family with sequence similarity 131, member B
            (Fam131b), transcript variant a, mRNA.
ACCESSION   NM_029528
VERSION     NM_029528.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4108)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   2  (bases 1 to 4108)
  AUTHORS   Collins,M.O., Yu,L., Coba,M.P., Husi,H., Campuzano,I.,
            Blackstock,W.P., Choudhary,J.S. and Grant,S.G.
  TITLE     Proteomic analysis of in vivo phosphorylated synaptic proteins
  JOURNAL   J Biol Chem 280 (7), 5972-5982 (2005)
   PUBMED   15572359
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY260739.1, AK163654.1, AK047763.1 and BB339978.1.
            
            On Nov 8, 2013 this sequence version replaced NM_029528.4.
            
            Transcript Variant: This variant (a) represents the longest
            transcript and encodes the longest isoform (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.55741.1,
                                           SRR1660817.34056.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164136, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               BY260739.1         2-150
            150-183             AK163654.1         71-104
            184-1629            AK047763.1         110-1555
            1630-4100           AK163654.1         1515-3985
            4101-4108           BB339978.1         281-288
FEATURES             Location/Qualifiers
     source          1..4108
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 20.6 cM"
     gene            1..4108
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /note="family with sequence similarity 131, member B"
                     /db_xref="GeneID:76156"
                     /db_xref="MGI:MGI:1923406"
     exon            1..199
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..1254
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /note="isoform a is encoded by transcript variant a;
                     protein FAM131B"
                     /codon_start=1
                     /product="protein FAM131B isoform a"
                     /protein_id="NP_083804.3"
                     /db_xref="CCDS:CCDS39472.2"
                     /db_xref="GeneID:76156"
                     /db_xref="MGI:MGI:1923406"
                     /translation="MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPS
                     TEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKP
                     TAMGQGRVAHMIEWQGWGKAPTIQPQHSHEAVRRDTDAYSDLSDGEKEARFLAGVMEQ
                     FAISEATLMAWSSMDGEDMSVNSTQEPLDCNYSDNYQELMESQDALAQAPMDGWPHSY
                     VSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHDMGPSQPASGYSAQE
                     PPPLLGVDTDWASEVGGVELARGPVEEEKRPLAPEEEEDAGCRDLESLSPREDPEMST
                     ALSRKVSDVTSSGVQSFDEEEGDANN"
     exon            200..309
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            310..345
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            346..439
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            440..637
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            638..781
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            782..4108
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1574
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
     regulatory      4081..4086
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /note="hexamer: ACTAAA"
     polyA_site      4101
                     /gene="Fam131b"
                     /gene_synonym="6330503C03Rik; 6530406I18Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggcggcgacg gaggctgccg tggggaggga tggagagggg aggggggagc ggagccgagc
       61 ggagacagcc gcggcgctgc agagcggctg gggcggcggc gcggttcccg gtgctccccc
      121 cggcgagggc cccgagtcgg tgagggccgg gacccggcgg cccccggagc catgggctgc
      181 atcggctcgc ggactgtggg gaacgaagtg attgccgtgg actggaaagg cctcaaggat
      241 gttgatcaga tcaacatgga cagcaccagc tcgctgcatg gcagcagtct ccatcggcct
      301 tcgacagagc aaacacgaac agatttctcc tgggacggca tcaatctttc catggaggac
      361 accacttcca tccttccgaa gcttaagcga aactctaatg cctatggcat tggggccctg
      421 gccaagtcat cattctcagg gatctcgagg agcatgaagg accatgtgac aaagcctacc
      481 gccatgggcc aaggccgggt ggcccacatg attgagtggc agggctgggg gaaggctcca
      541 acaattcagc cacaacatag ccatgaggct gtgcgcaggg atacagacgc ctactctgac
      601 ctcagtgatg gcgagaagga ggcacgtttc ctagcaggtg tcatggaaca gtttgctatt
      661 tctgaggcta cacttatggc ttggtcttcc atggatggtg aggacatgag tgtcaattct
      721 acccaggagc cactggactg caactacagt gacaactacc aggagctgat ggaaagtcag
      781 gatgcactag ctcaagcccc aatggatgga tggcctcact cctacgtgtc acaggggatg
      841 tactgtctgg ggtcatctga cgcctgggaa gcaagtgatc agtccctcat tgcatctcca
      901 gctaccggat cctatcttgg ccctgcattt gatgactcac agccgagcct gcatgacatg
      961 gggccttccc aacctgcttc aggatactct gctcaggagc ctccaccttt gttgggggta
     1021 gacactgact gggcatcaga ggttggtggg gtggaactgg ccaggggacc tgtagaggaa
     1081 gagaagagac cactggcccc tgaggaggaa gaagatgcag gatgccggga tctggagtca
     1141 ctttccccac gagaggaccc agagatgtcc actgctctca gccggaaggt gtctgatgtc
     1201 acatcctcag gtgtgcagtc ctttgatgag gaggaagggg atgccaacaa ctagcttctt
     1261 cccaccccac tctgacctga ggggcacggc tgcaacccat accctcccaa gctccagcag
     1321 cacagatgaa acccgggcag aagacagcag ggaactggga gcttccagtc ctcaccaggc
     1381 cgttaccgcc ctggcaagtg aaggaccagc agggggtttt atctgggctc gcactccaga
     1441 aacccgtcat tccaggaact gagacccaga caattaggtg gcagggtggt gggagatgag
     1501 ccatggctat ggctcttggg tccatgccca ggttcgtcgc gctgaacact gaatctcagt
     1561 ttttacaccc ccgatttcgt cttccaggag ccttggctgt gctgtccgaa tgcctctttt
     1621 ctccatttca ctctgctttc ctggttctgt tctctctgcc catggcacca gtgcatccct
     1681 actgtgggaa gcaggcctca ggggctgttg gacatggctt ggcaggaaca gcagaatacc
     1741 tgcctgaagg agtggcctga agggtccttc tgtgttcagc atagacagtg ggcccagctc
     1801 aggcaatctt ggcttttgag atcaggagcc aaaagtgagg tagacatgga gctggggttg
     1861 acaggggtca tggtatgatt ctttgtccca aggcctactc agagacaaga gggtcaccaa
     1921 tgagacaaag aataaacaca gccacttgaa tgtcctgtgg ctggaagggg gaccttaagc
     1981 ccactggggt tggctactcc agatctggct tctctttctg ccttctttca tctggcaccc
     2041 agcccccagg aggggaagcg tctcaaattg ttgacctagg atgcagtgtc cccatccgtg
     2101 gggaagcatg agggctgggc ccccctctac cttcccaaat tctctggagc tgtttacact
     2161 tttctctttg ccttttctac atttttataa cttcttgggg actcagggtt gagcagagtg
     2221 gagtggggag tctggtgctg tcactgcctt ggctggactg ggtgggtggc tggctgaggg
     2281 ccagggtgga cactggctgc ttctgttttt tgtcagctgt tcccaggggt cctcaatcca
     2341 gtgttcctta taggagtggc tgtggtgata cctaagcttg cctgtccata cctcctttcc
     2401 tttgatttgg tgtggaccat ggggacaggg agcaacagca agtcagtgca gtattgttat
     2461 gagggtgctg cagcagccac atctccaatc tggcctttgg cataagcaga gttttgatag
     2521 gagatgccca agcttgtcac cgtgtttttc tccttcctcc tgtctattca tggctccagt
     2581 cccaaggcct tgtgtcctac tataatgtca ggggtccgaa actactccct tacccatcaa
     2641 aatgatgagg ctcaccgcta gagtgattct gttcatctgt gatgctgtcc tgtaccacat
     2701 tcatacactg aactgtaacc agagtaggtg accctcatcc ttcaggggag ggggaagcat
     2761 gggatcttaa ggtctcttaa tgtaggaaca tgggaataaa ccaggagagc caaagtaggt
     2821 gaacagtcac ttagctcatc taatgctgcc tgaatgggag aagagatacc tcgtgtttgc
     2881 taatgtgttg tggtttagct tatcaggacc tcatttctag gactaggaag ggctagcctg
     2941 ccaaccctgg caactgcccc taacccctgg cctcctgtcc tagcctcctg ggagtttgca
     3001 tgttgaagct aatctattcc cagggtctct ttgccttgtc taccctgctc tatcaacaca
     3061 tttgtctcat ctcactgccc ccatattctt cccccaggtg accgcggaca gcgagtccag
     3121 tgagaggttt attcatctcg gttccctttg ctcagggccc tggaaagtta ggaagagtaa
     3181 actaaagcag ctttctttcc tccttccatt cctcaaggaa gccaaatggt ccccattgaa
     3241 agactacaaa agacctgaag aaacctagta gggtttgtac ccgagcaggg acttggtttc
     3301 cccaggctgc tggcatactg ccacagaggc aggtgaggcc caccccactc tgaagagaga
     3361 agatgcaagg agctggccca ggaccatttt gaactctttt tttttagagg gagggaccac
     3421 ctctctggtg ctggggcagg gtgcatgggg ggtttgcttc tagcctactt taaggggagg
     3481 ggtggggcat gtgcaggaag aggctgttag gggtgggtgg gaagggttgc ttttcctttg
     3541 gggttaaagg ctgtgcagca cgttttacag cagctgggga gcagggctgt tttttatatt
     3601 cttgtgaatg agactgctct tgctgaatga tttttttaag gggtggggta cactttcatt
     3661 ttcaattgac tttattaaat gaaaatccaa accttccatt ccttcccttc cattgcctcc
     3721 cccagcccac atacctccct tcttttcctt gtgttaagaa aggaatcgtg aaggacaagt
     3781 tcttaccctt gtccatatat atcccacact ctgtcttcca ggtctgagaa atacccattt
     3841 ttatggtcag tcttagcatg ttttcttaat gtgaaactct caccccaggc ccaggaagga
     3901 gtctatgaca tatattacag agagaattct atataaatat atataagtat tatagattat
     3961 atacacatgg gcatgggctt ggaagccccc tgctaatcct cctacctagg cctcaatgtc
     4021 ttagccttgg ttggtggaag gagcccatgt tggagaaggc cagaggctgt gtggaacaac
     4081 actaaacaga atgtggtggc atcctttg
//
