LOCUS       XM_030247459            3867 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Fas associated factor family member 2
            (Faf2), transcript variant X5, mRNA.
ACCESSION   XM_030247459
VERSION     XM_030247459.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030247459.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..3867
                     /gene="Faf2"
                     /gene_synonym="2210404D11Rik; mKIAA0887; Ubxd8"
                     /note="Fas associated factor family member 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 11 ESTs, 775 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 37 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:76577"
                     /db_xref="MGI:MGI:1923827"
     CDS             586..1308
                     /gene="Faf2"
                     /gene_synonym="2210404D11Rik; mKIAA0887; Ubxd8"
                     /codon_start=1
                     /product="FAS-associated factor 2 isoform X2"
                     /protein_id="XP_030103319.1"
                     /db_xref="GeneID:76577"
                     /db_xref="MGI:MGI:1923827"
                     /translation="MLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRL
                     EGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEK
                     ERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKII
                     FKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEWPNP
                     PTLQEAGLSHTEVLFVQDLTDE"
ORIGIN      
        1 gcggacgggt caggagcgta gaggcggcgg caaaatggcg gcgcctgagg agcaggatct
       61 aactcaggag cagaccgaga agctgctgca gtttcaggga catgtgtgta cttgaaaatc
      121 agcagtgtgt gagtgcctga gaagactgat tctggactga ggctgcccgg atgatctgac
      181 tggcatagag tccatggagc agtgtcgcct tgctttggag cagcataact ggaacatgga
      241 ggctgctgtc caggacagac tgaatgagca ggaaggtgta ccaagtgttt tcaatccacc
      301 gccagctcgg cccctacagg ttaatacagc tgaccacagg atctacagct atgttgtctc
      361 aagaccacaa ccaaggggcc tgcttggatg gggttattac ttgataatgc ttccattccg
      421 gtttacctat tacacgatac ttgatatatt taggcactta acgatgccaa gcgggaactt
      481 cgatttcttt tggtttatct tcatggagat gaccaccagg actctgatga gttctgccgc
      541 aatgctctct gcgcacctga ggtcatctca ctgataaaca gcaggatgct tttctgggct
      601 tgttctacaa acaagcctga ggggtacagg gtgtcccagg ccttacggga gaacacctat
      661 ccattcctag ctatgattat gttgaaggat cggcgaatga ctgtggttgg aaggctagaa
      721 ggcctcattc aacctgatga cctcatcaac cagctgacat tcatcatgga tgcaaaccag
      781 acttacctgg tgtcagaacg tctagaaagg gaagaaagga accaaaccca ggtgctgaga
      841 caacagcagg atgaagccta cctggcttct ctcagggcag atcaggagaa agagaggaag
      901 aagagggagg agaaagagcg gaaacgccgg aaggaggagg aggtgcagca acagaagctg
      961 gcggaggagc gaagacgaca gaacttgcag gaggaaaagg agaggaagct ggaatgcctg
     1021 ccccctgagc cctcccctga tgatcctgaa agtgtcaaga tcattttcaa gttacccaat
     1081 gattccagag tagagagacg attccacttc tcacagtctc taacagtcat ccatgacttc
     1141 ttattctcct tgaaggaaag ccctgaaaag tttcagattg aagccaattt tccaagacgg
     1201 gtacttccct gtgttccttc agaggaatgg cccaaccccc caacactgca ggaggcggga
     1261 ctcagccaca cagaagttct ctttgtccag gacctgacag acgaatgaca ctttactgcc
     1321 tccttctccc accccaatcc ctaaaagaaa cggaaaaaca aaaacagaga acaagagata
     1381 aattcatatt attattataa tacaatattt tttttaaaaa cactgctgca tcctatggaa
     1441 ggatcagaaa ccatgctgcc tgcaagagtc acaacctgcg tgcatccgtg tgcagaaggt
     1501 cagcagtgag cattgcctgc tcggcagaca gcagactcgc cttcccacag tgaagagacg
     1561 gcggccctcg tggggaagga gacattccca ctgttcgcag tcattcttgc ttttgtagaa
     1621 agtacaaatg aaaccctcca gcagcagctc ctgaggacct gttcctccca cttgtggagg
     1681 aagggaggag agcccggaac agactgccca cagtttatga ataactttgt ttctgtttgc
     1741 tttgtaatga taatgaccaa aggaatgagg ctgacttagg tgtatttttt tcccttagat
     1801 ttgataagag ccaatgccct gggctccgag gcgaggccgg ggccgcgtaa taaaggtgcc
     1861 ctgggctcat ttgcgcatcc tttgccactg ttcctctcca ggtggtccca gagtggtcat
     1921 ttggtttggt acagttctgc cacttgtgta tcccatttgg agcaatgaga ggaagtctcg
     1981 gattgtgacc cacaaaaggc tgtgtgtggg tgtgtgctca cctttacaca caagtacagc
     2041 ttttccttgg catctgtacc aggtggtggt aaaggggtct gaaccaaagg ctagcagctc
     2101 ctggttcccc tctggctgta ctgctgctct tcccagctcc cctcactcac caagcttggt
     2161 gccttccaga ggactagcgg ccccttcccg ggcccaccgc tccacctgtg gatgcttggc
     2221 ctgcttcagt gcaagtgtga taacagtgtc taaggataga cccattgcag acatggaggt
     2281 gcactgagag gcagaggcag cagatctctg aattccaggc cagcctggtc tacagagtga
     2341 gaccctgtct caagttttga gccaggaact ttgaaagaga agttggcctc ccagcccatg
     2401 tgtgttggaa agcacattcc gtggtaccag agacagtttg cagccttgct cttgccgtgg
     2461 tgaagcagca ggagcccccc ccccctcgaa atgtctcatc tgtgactgaa tgttgggtag
     2521 tggatatgtg gttgatccac gtgctcccac atgccagcgc gcactgataa gtattccagt
     2581 gtggactagc tcggctggta caggcttggc acactgcagc tctctgaagt tactgtagtc
     2641 actaggagac agtgggcatt ccagtcgaga gaaagcatag cttgtgttgg tcacctccaa
     2701 gagccctcta aagccactgc tctctaatag tcctgtgctt ctgtcctctg ctgctttcca
     2761 ttgttagagg gaacatggtg aggacggaag gctcgtgaag ccattcagaa aacccatgac
     2821 tatccccgag gccctagcgc agggccctga attctacctt gggaaatgtt agcgctgcta
     2881 ggcctgctgg cactacagtg aggttgagag gaccctcaga tgaagtctgt cttgctgaca
     2941 gtgatgcaga gggacttccc cactcccaga gcctccctcc cagattgtag tccctgcctg
     3001 tctgtctgcc tggcacatgg gcatgtggac tgtgaacgta tcttgttcac agctgcttgg
     3061 agaaattctg atttctccct cttaatctct ttctgtaatg tgtacctttt aattttatgc
     3121 cctttgcctt ttgataactg caaaaggata ctagatgcca ggctaataaa aatagggtcc
     3181 cctgttgcta caactctgag ggcagcctgt tgatgtcctg gaggcttgtg ctgaaatacc
     3241 tacccagctc tcctcatctg cccctccctt agttttgaga gaggttctga tggcccaaag
     3301 tggcctcaaa ctctccacac ccaagactgg ccttgaactc ccctcctgct cctggttcct
     3361 gtagtgggca tgtgggtatg caccactgca taggcttgcc agtagctgtg aaacacttca
     3421 gttttcttgc tgtacctagg tctgctgtct gggtgccatt tctctccctg ggtgaactgt
     3481 ggacttcaca ttttgtccct gaggccagtt cagtctgtga ctcccaaaga cctgtgagct
     3541 tgaagacacc tgtgaccatt tgctattgct taaattgctt ccaaaatatt ctgccagttg
     3601 ttccaaagtc aagtcatgga caatggaagg atttatttcc agttctgccc ctcattcccc
     3661 tctgaagtgg cctcagctga atgaccatgg gggtgaccaa gcaaccatac ctgagtaagt
     3721 tttacagcct cagtctggtc ttttcttcct ctgcagaatc gtctgtggca gataggtttt
     3781 gtggggggtt ttgtttttgt tctgtttttc tccttgcttg cttccactat gacagaagag
     3841 aaggcaagat tcctgtttct tttaaaa
//
