LOCUS       NM_001081664            1685 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus fatty acid desaturase 2B (Fads2b), mRNA.
ACCESSION   NM_001081664 XR_001599 XR_001628 XR_004542
VERSION     NM_001081664.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC120879.2.
            
            On Jun 3, 2007 this sequence version replaced NM_001081664.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC120879.2, AK076485.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.68 cM"
     gene            1..1685
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /note="fatty acid desaturase 2B"
                     /db_xref="GeneID:228151"
                     /db_xref="MGI:MGI:2687041"
     exon            1..508
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     CDS             170..1633
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /note="fatty acid desaturase 2-like protein FADS2P1; fatty
                     acid desaturase 2B, pseudogene"
                     /codon_start=1
                     /product="fatty acid desaturase 2-like protein FADS2B"
                     /protein_id="NP_001075133.1"
                     /db_xref="CCDS:CCDS38168.1"
                     /db_xref="GeneID:228151"
                     /db_xref="MGI:MGI:2687041"
                     /translation="MKLEEKLEHNESLVGKSRPCLHDTHQANGKPIANGNPTANGKVE
                     VYEKQEANGKGNRLGKCLNLYTWQEIQRHSQEADQWLVIDRKVYNVTDWAGKHPGGRR
                     VLNHYAGQDATDAFRAMHLDLGMVKLYLKPLLIGELSPEEPSQEKNKNAQLVEDFREL
                     RKTLEAMNMFSANLRFFFLHLAQILILEISAWLILHHFGSSWLVTILISFLLTVSQAQ
                     CSFLQHDLGHLSMFKKSKWNHLMHKFVMCHLKGLSADWWNYRHFQHHVKPNIYPKDPD
                     IDVGPLFLVGDTQPIKYGKKKIKYIDYEKQHLYFYMVALPFLMPVYFNLQSMQVMYLR
                     KYWMDIAWVSSFYIRYFITFGPFYGIFGTVLLIYLVKFIESPWIAYVTQMSHIPMKMS
                     SEENHDWLSTQVVATCNIEQSFFNDWFTGHLNFQIEHHLFPTMPRHNYHKVAPLVKSL
                     CAKHGLQYINKPILKAFGDIVRSLKKSASLWMNAYYE"
     exon            509..619
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            620..817
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            818..919
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1045
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1046..1106
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1183
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1184..1281
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1378
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1379..1458
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1459..1584
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1685
                     /gene="Fads2b"
                     /gene_synonym="4833423E24Rik; Fads2p1; Gm113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgggcaggtg ctctcactgt cagtttctga agagccaatt tagtcaaagg ctgtgtgggc
       61 accaggactg ctgtggaatg aaataggagg aaaagagtaa ttttaaggct caattataga
      121 actagaaagt ttaggagtca acttagataa tctcagggat ccaggaataa tgaagttgga
      181 ggaaaagctt gagcacaatg agagccttgt tggaaaaagt cgaccgtgtc tccatgacac
      241 gcatcaggca aacgggaaac cgatagctaa tgggaatccg acagcaaatg gaaaagtgga
      301 ggtctatgaa aagcaggagg caaatggcaa gggcaacagg ctcgggaaat gtctcaacct
      361 gtacacctgg caggagatcc agagacacag tcaggaagca gaccagtggc tggtgattga
      421 tcgcaaggtt tacaatgtga ctgactgggc tggcaagcat ccaggtggac gtcgggttct
      481 caaccactat gctgggcaag atgcaacgga tgctttcagg gccatgcacc tggatctggg
      541 catggtgaag ctgtatctta agccactact cattggagaa ctttctccag aagaaccaag
      601 ccaagagaaa aacaaaaacg cacagttggt ggaagatttc cgtgaattgc gcaagacgtt
      661 agaggccatg aacatgttca gtgccaacct gcggttcttc tttctgcacc ttgcccagat
      721 cttgatcttg gaaatctcag catggctaat actacaccat tttggcagca gctggcttgt
      781 tacaatactt atttcctttc tccttacagt gtctcaggct caatgttcat ttttacaaca
      841 tgacttagga cacctttcca tgtttaagaa gtccaagtgg aaccatctga tgcacaaatt
      901 tgtaatgtgt catctcaagg gcctgtcagc tgattggtgg aattatcgac acttccagca
      961 tcatgtaaaa ccaaatatct accccaagga tccagacatt gatgtgggcc cactctttct
     1021 ggttggagat actcagccta taaagtatgg caagaagaaa ataaaataca ttgactatga
     1081 gaagcagcac ctgtacttct acatggttgc actccccttc ctcatgcctg tctactttaa
     1141 tttgcaatcc atgcaagtga tgtaccttcg aaaatactgg atggacattg catgggtcag
     1201 cagcttttac attcgttatt tcatcacatt tggccctttc tatggaattt tcggaacagt
     1261 gttgctcata tatttggtca agtttattga gagcccctgg attgcttacg ttacccagat
     1321 gagtcacata ccaatgaaaa tgagcagtga agagaaccac gactggctca gcactcaggt
     1381 tgtggccacc tgtaatattg aacagtcctt tttcaatgac tggttcactg gacatttgaa
     1441 cttccaaatt gaacaccacc tctttcccac aatgccacgc cataattacc acaaagtggc
     1501 acctctggtg aagtcacttt gtgccaagca tggattgcag tatataaata agcccatatt
     1561 gaaggccttt ggagatattg tcaggtcctt gaagaagtct gcttccctct ggatgaatgc
     1621 ttactatgaa tgatgcagag ccttgcattt attggtgtct ctgaagaggg tgatggctgt
     1681 gcatg
//
