LOCUS       NM_178643               1788 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus Fanconi anemia core complex associated protein 24
            (Faap24), mRNA.
ACCESSION   NM_178643
VERSION     NM_178643.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC154126.2.
            
            On May 2, 2007 this sequence version replaced NM_178643.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK082457.1, AK031566.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164132, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-555               AC154126.2         17926-18480
            556-695             AC154126.2         19317-19456
            696-848             AC154126.2         19566-19718
            849-1788            AC154126.2         21602-22541
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 21.37 cM"
     gene            1..1788
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="Fanconi anemia core complex associated protein 24"
                     /db_xref="GeneID:101831"
                     /db_xref="MGI:MGI:2142208"
     exon            1..555
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             450..1115
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="Fanconi anemia-associated protein, 24 kDa; fanconi
                     anemia-associated protein of 24 kDa"
                     /codon_start=1
                     /product="Fanconi anemia core complex-associated protein
                     24"
                     /protein_id="NP_848758.1"
                     /db_xref="CCDS:CCDS21149.1"
                     /db_xref="GeneID:101831"
                     /db_xref="MGI:MGI:2142208"
                     /translation="MERNPPDGTGPVHVPLGHIVASEKWRGSQLAQEMQGKVRLIFEE
                     GLASADFYLSSKSCILYVTEADLVAGHGYRKRLARFRNSSHLQGIIIVEKTQMSEQYF
                     PAVQKFTVLDLGMVLLPVASQSEASCLIIHLVQEQTREPSKNPFLRKKRSMLSELSLV
                     QTVQQIPGVGKVKAPLLLQKFPSIQQLSNASVQELEEVVGPAAAQQIHTFFTQPKRQQ
                     PRS"
     exon            556..695
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            696..848
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            849..1788
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1627..1632
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="hexamer: AATAAA"
     regulatory      1638..1643
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="hexamer: AAGAAA"
     regulatory      1645..1650
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      1652
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="major polyA site"
     polyA_site      1656
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="major polyA site"
     polyA_site      1662
                     /gene="Faap24"
                     /gene_synonym="C230052I12Rik"
                     /note="major polyA site"
ORIGIN      
        1 ccccggcgca gtgagcttcc ctgcctttgt agccctggac aggaaccgaa tagaaggaca
       61 gggaccgaat ggaagagcca ccgtaagcgt cctgttagga caccagagct aagggaggtg
      121 cttacaaaga gggacggagt cactcaaaca gaaatctccc gggtttagct cggggtagtg
      181 gcgcccggct gtcattttag cacttgggct gctgagttca agtccagctg gagtcaacta
      241 tcagtacaga gccaagcgtg ataagaagac ccagtcttat tttgaaaata aataatctct
      301 tgaattcaga cttcggttga agtagctcag tgcctgaaaa tccactctac agatcctgtc
      361 aaagaggtcc cgacttcgtg tagaactgtg tgcaacagcg cctgctctag tgagaccttg
      421 cattttcctc atttagacca aaaccacgga tggaaaggaa cccgcctgat gggaccggtc
      481 cggtccacgt gccactagga catattgtgg ctagtgaaaa atggcgcggg tcccaactgg
      541 ctcaggagat gcaaggaaaa gttagactca tttttgagga gggcctggca tcagcagatt
      601 tttacctgtc tagcaaatct tgcattctct atgtcactga agcagatttg gtggccggac
      661 atggctacag aaaaagactc gctcgcttta gaaattcctc acatcttcaa gggatcataa
      721 tagttgagaa gacccagatg agtgaacagt atttcccagc agtccagaag tttactgtgc
      781 tagaccttgg gatggtgctg cttccagtgg ccagccagtc ggaagcatcc tgcctcatta
      841 tccacttggt tcaagagcaa accagagagc ccagcaagaa ccctttcctc aggaaaaagc
      901 gctccatgct ctccgagctc tcccttgttc aaacagtgca gcagatccca ggggttggga
      961 aagttaaggc cccccttctg ctccagaagt ttccgagcat ccagcaactg agcaacgctt
     1021 ccgtccaaga actggaggag gtcgtggggc ccgcggcagc acagcaaatc cacaccttct
     1081 tcacccagcc taagcgacag cagccccgca gctgactctg ccttcagact tcaaactgca
     1141 gcgtctggtt tccatattta aaaagaagga aaagttcccc tgtcaatggc aatgggctaa
     1201 agacaaggag aggaccgatg aggctcgcag tcaccctgcc tcggtgtctg tctgggcagc
     1261 cacctggtgg ggcttggggg tcgcgggcgg cactggccac tttctgctaa gatgaagagg
     1321 gtccccacgg ggatcatcca gagactcatt cccagccgca gccagctgga gcagatttgt
     1381 acaagactct ctgccctgcc tctgtcactg agaggccctg tgagggtcca gcgctgagta
     1441 gggagtgtcc ccgttaacca gtgtcagggc cacagctcag gtcttctcca cactcgtcag
     1501 gtacctgtgc tatggagttt ctgcccgagt caacaaacgc ctttcctccc gcatcacccc
     1561 tccccccaat caacacaaga aaactatgct gtgctttgga tgacgtggaa gaaataatta
     1621 ggatgaaata aaagcaaaag aaaaaagaaa aattaactca aacaatgaac atgactttat
     1681 ttaaatattt atacaaacag agccccaggg atagcgggca cactttcctt aaggcatttg
     1741 tgttctccag atattgcaca atagaaaaat atttaaatcc ttgttact
//
