LOCUS       NM_001101475            3297 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA F830016B08 gene (F830016B08Rik), mRNA.
ACCESSION   NM_001101475 XM_140380 XM_913583
VERSION     NM_001101475.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Schwerbel K, Kamitz A, Krahmer N, Hallahan N, Jahnert M, Gottmann
            P, Lebek S, Schallschmidt T, Arends D, Schumacher F, Kleuser B,
            Haltenhof T, Heyd F, Gancheva S, Broman KW, Roden M, Joost HG,
            Chadt A, Al-Hasani H, Vogel H, Jonas W and Schurmann A.
  TITLE     Immunity-related GTPase induces lipophagy to prevent excess hepatic
            lipid accumulation
  JOURNAL   J Hepatol 73 (4), 771-782 (2020)
   PUBMED   32376415
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132320.4.
            
            On Apr 8, 2010 this sequence version replaced NM_001101475.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK156308.1, SRR10223970.20034.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AC132320.4         67235-67341         c
            108-3297            AC132320.4         57705-60894         c
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 34.36 cM"
     gene            1..3297
                     /gene="F830016B08Rik"
                     /gene_synonym="Ifgga4"
                     /note="RIKEN cDNA F830016B08 gene"
                     /db_xref="GeneID:240328"
                     /db_xref="MGI:MGI:3588218"
     exon            1..107
                     /gene="F830016B08Rik"
                     /gene_synonym="Ifgga4"
                     /inference="alignment:Splign:2.1.0"
     exon            108..3297
                     /gene="F830016B08Rik"
                     /gene_synonym="Ifgga4"
                     /inference="alignment:Splign:2.1.0"
     CDS             128..1378
                     /gene="F830016B08Rik"
                     /gene_synonym="Ifgga4"
                     /note="interferon-gamma-inducible GTPase Ifgga4 protein"
                     /codon_start=1
                     /product="interferon-inducible GTPase-like"
                     /protein_id="NP_001094945.1"
                     /db_xref="CCDS:CCDS50297.1"
                     /db_xref="GeneID:240328"
                     /db_xref="MGI:MGI:3588218"
                     /translation="MGQLLSDTSKTEDNEDLVSSFNEYFKNIKTEKIISQETIDLIKL
                     YLNKGNIHGANSLISDALRNIDNAPINIAVTGESGAGKSSLINALIGIGPEEEGAAEV
                     GVIETTMKRTSYKHPKIETLTLWDLPGIGTQKFPPKTYLEEVKFKEYDFFIIVSATRF
                     TKLELDLAKAITNMKKNYYFVRTKVDIDVENERKSKPRTFEREKALKQIQSYSVKIFN
                     DNNMAVPPIFLISNYDLSDYDFPFLVDTLIKELHVQKRHNFMLSLPNFTDQAIDRKYK
                     ATQQFIWLEAFKIGVVAIFPVLGNLRNKDMKKIKNTLNYYQKIFGVDDESLELVAKDF
                     QVPVEQVKKTMKTPHLLKKYREETFRNDFKKLVSTFGRLLAVGLYFPAIYYLQLHILD
                     TVTEDAKVLLRWKYSKPRSNSTYP"
ORIGIN      
        1 acagatgaag caggtgtggg tctcatgtga agagcctgga gcactgtaaa ggttgctgcc
       61 tgcagctgaa ctacagtaaa caaatccact ggacacagga gtttctgtaa ccttttaaat
      121 catcaacatg ggtcagctcc tctctgacac atctaagact gaagacaatg aagatttggt
      181 atccagcttc aatgaatatt ttaaaaacat taagacagaa aaaatcattt ctcaggaaac
      241 catcgattta ataaaattat acctgaacaa aggaaacatt catggggcaa actctttaat
      301 cagtgatgca ttaagaaata ttgataatgc tccaataaat attgctgtga caggagagtc
      361 tggagctgga aaatccagcc tcatcaatgc cctgataggg attggacctg aagaggaagg
      421 ggcagctgaa gttggagtaa tagagacaac tatgaagaga acttcttaca aacatcccaa
      481 aattgaaaca ttgaccttat gggacttgcc tggtattgga actcagaaat tcccaccaaa
      541 aacttatctg gaggaagtaa aattcaaaga atatgatttc ttcattattg tttctgccac
      601 acgttttaca aaacttgaac tagacctcgc caaagcaatc acaaatatga aaaagaatta
      661 ctactttgtg agaaccaagg tggacattga tgtagaaaat gaaaggaaat ccaaaccacg
      721 tacttttgaa agagaaaaag ccctgaagca gatccaaagc tattctgtga aaatctttaa
      781 tgataataac atggccgtac caccaatttt cttgatctct aactatgatt tatctgacta
      841 tgattttcca ttcctggtgg ataccctgat taaggaactc catgttcaaa agcgccacaa
      901 ttttatgctt tccctgccta actttacaga ccaagccatt gacagaaagt acaaggctac
      961 acagcagttt atctggctag aagccttcaa gattggagta gtggcaattt ttcctgtact
     1021 gggcaacctc aggaataaag atatgaagaa gataaagaac actttaaact actatcaaaa
     1081 aatctttgga gtggatgatg aatccctgga gttggtggct aaggatttcc aagtgcctgt
     1141 tgaacaggta aagaaaacaa tgaagactcc tcatttgttg aagaagtata gagaggaaac
     1201 atttaggaat gatttcaaga aattggtatc aacttttggt aggctccttg ctgtaggtct
     1261 ttacttccct gcaatctatt atttacaact tcatatcctt gacacagtga ctgaagatgc
     1321 caaagttctc cttcgatgga aatattcaaa acctagatca aactcaactt atccatagct
     1381 tctgaccctg acaatatcaa gtggtctata ccacgaattc actaggaaaa ttactcctct
     1441 gatatctttt ctttacagcc aatccactac caccatagga aaacctgggg gataaagatc
     1501 atgtatctta atatgtcaga acttgacaat ccccaatcct tcttcagttc ttaaatttcc
     1561 cctatatcct tttctctttc aactatatat acatacttaa atacatatat acatacatac
     1621 atatatacac acacaaaaac ataccagtaa acatgcaaat gcatatgcac aaaaaataca
     1681 ataggtgttt tgtagccatt ttctcctaat caaaacatcc taaaaaaaaa aacccaggaa
     1741 gctgggatct ctatgctcag tacataaaac acttggcatg tttgatggtt tgaatatgca
     1801 tggccccata ggttcattta ggtattgcct tgttagaata ggtgttgtct gttgggggaa
     1861 gtagatgtat ttgaggtctc atagatgttt aacttatacc cagttttgta cacagtctcc
     1921 ttctgctgcc tgcaaatcaa gatgtagtcc tctcagctca tgcttcccac atgatgaaag
     1981 tggtataaac atctgaactg tgagccagtc ccatttaaat attttccttt ataagagttg
     2041 ccttggtcat ggagtctctt cacagaaact gaaacccaaa gatggaaatt gttaccaggg
     2101 acatgggtat gactgtgata gacctgacaa tgttatcatt tggagaaatt tggactttgg
     2161 gactttgtgt taagaaagca gtagaaggct ctaagagcta tttaatgggc catactagta
     2221 agagcattga agacagtctt gctggggatg atttaatatt tgagtcgtag attgagcttt
     2281 cagagaagaa gcattttagt atgttcccta gacaacatac ttatgttatt ttggtgaaga
     2341 atgtggctgc tttttgccct tgtccaaaga ctcagtctaa gcctaaagag aaaacattta
     2401 gattaattgc attagcaaag aaaatctcaa aacagcctaa tctagacact gtcctgtggt
     2461 taattcatgt tgaagacgat tttgatgaaa ccatgcaaac ttagaaaggg ggggaagctt
     2521 ctggcccact gcagcactgg gatccctggc ccagggattc tccagacacc cacaaggacc
     2581 cacacaggat ctgccatgag atcctaagaa ctctgctgag tggaacacag cgcctgttcc
     2641 aatccaattg ttcgggacct gagactgcat taattaagga agcagataac ctggcctgat
     2701 ccggggctca agtcccttcc ggcccactgc agcaccagtg tccctggccg tgggagtctc
     2761 cggacaccgg caagcaccca cacaggaccc tccatgggat cttaaaacct atggtgagtg
     2821 gaacacaact tctgccagga ggcaggttca aacaccagat atctgggcac cttccctgca
     2881 agaagagagc tgcctgcaga gagtactctg accactgaaa ctaaggatag agctagtctc
     2941 ccaggtctgc tgatagagtc taacaaaatc acctgaggaa caagctctaa ccggagacaa
     3001 ctataacaac taggtccaga gaataccaga tggcgaaagg caaacataag aatcctacta
     3061 acagaaatca agaccactca ccatcatcag aacgcagcac tcccacccca cctagtcctg
     3121 ggcaccccaa cacaaccgaa aatctagaca cagatttaaa agcatatctc atgatgatgg
     3181 tagaggacaa taagaaggac tttaataact cacttaaaga aatacaggaa aacactgcta
     3241 aagagttaca agtccttaaa gaaaatcagg aaaacacaaa caaacaggta gaagtcc
//
