LOCUS       XM_011242172            2494 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus coagulation factor XI (F11), transcript
            variant X3, mRNA.
ACCESSION   XM_011242172
VERSION     XM_011242172.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_011242172.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..2494
                     /gene="F11"
                     /gene_synonym="1600027G01Rik; Cf11; FXI; PTA"
                     /note="coagulation factor XI; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:109821"
                     /db_xref="MGI:MGI:99481"
     CDS             170..1705
                     /gene="F11"
                     /gene_synonym="1600027G01Rik; Cf11; FXI; PTA"
                     /codon_start=1
                     /product="coagulation factor XI isoform X3"
                     /protein_id="XP_011240474.1"
                     /db_xref="GeneID:109821"
                     /db_xref="MGI:MGI:99481"
                     /translation="MPGEMHRRCPLPVFHIRNRVFSQCGPSVSERESEPLDISLPRER
                     KPLVPKMCLLKYTRTGTPTTITKLNGVVSGFSLKSCGLSNLACIRDIFPNTVLADLNI
                     DSVVAPDAFVCRRICTHHPTCLFFTFFSQAWPKESQRHLCLLKTSESGLPSTRITKSH
                     ALSGFSLQHCRHSVPVFCHPSFYNDTDFLGEELDIVDVKGQETCQKTCTNNARCQFFT
                     YYPSHRLCNERNRRGRCYLKLSSNGSPTRILHGRGGISGYSLRLCKMDNVCTTKINPR
                     VVGGAASVHGEWPWQVTLHISQGHLCGGSIIGNQWILTAAHCFSGIETPKKLRVYGGI
                     VNQSEINEGTAFFRVQEMIIHDQYTTAESGYDIALLKLESAMNYTDFQRPICLPSKGD
                     RNAVHTECWVTGWGYTALRGEVQSTLQKAKVPLVSNEECQTRYRRHKITNKMICAGYK
                     EGGKDTCKGDSGGPLSCKYNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWILEKT
                     QTV"
ORIGIN      
        1 aggacagcgt cacagaaata ttgccaatgg taaacatgac aggcgcgatc tctggatatt
       61 ccttcaagca atgccctcag caattaagta cttgcagcaa agatgtgtac gtgaacctag
      121 acatgaaggg catgaactat aacagctctg tcgtgaagaa tgctcgagaa tgccaggaga
      181 gatgcacaga cgatgcccac tgccagtttt tcacatacgc aacagggtat tttcccagtg
      241 tggaccatcg gtgagtgagc gggagtccga gccgctggat ataagcctgc ccagggaaag
      301 aaaaccgctg gttcctaaaa tgtgtctttt gaagtacacc cgaacgggga cgccaaccac
      361 aataacgaag ctcaatggcg tggtatctgg attttcactg aagtcctgtg gactttcaaa
      421 cttggcttgt atcagggaca ttttccctaa cacggtgctg gcagacctta acattgacag
      481 cgtggtggcc ccagatgctt ttgtctgtcg tcgcatctgc acgcatcacc ccacttgttt
      541 gttcttcaca ttcttttccc aagcatggcc gaaagaatct cagagacatc tttgtctcct
      601 taaaacctct gaaagtggat taccaagcac acgcattaca aagagccacg ccctttcggg
      661 cttcagtctc cagcactgca ggcacagtgt cccagtattc tgccatccgt ccttttacaa
      721 cgacactgat ttcttgggag aagagctgga catcgtcgat gtgaaaggcc aagaaacctg
      781 tcagaaaacg tgtaccaata acgcccgctg ccagttcttt acctactatc catcgcacag
      841 actgtgcaat gagaggaacc gcaggggcag atgttaccta aagctttcct ccaatggatc
      901 tccaacgaga atacttcatg ggaggggagg catctctgga tactcactga ggctgtgcaa
      961 aatggataat gtgtgcacaa ctaaaatcaa ccccagagtg gtaggaggag ctgcgtctgt
     1021 tcacggtgag tggccatggc aggtgactct gcacatcagc cagggacacc tgtgtggagg
     1081 ctccatcatt ggaaaccaat ggatactgac agcagctcat tgtttctctg ggatagagac
     1141 acctaaaaag ctgcgtgtct acggtggcat tgtaaatcaa tcagaaataa atgaagggac
     1201 tgctttcttc agggttcaag aaatgataat tcatgatcag tatacgacag cagaaagtgg
     1261 gtatgatatt gccctgttaa aactggaatc agccatgaat tacacagatt ttcagcggcc
     1321 aatatgcctg ccttccaaag gagatagaaa cgcagtgcac acagaatgct gggtgactgg
     1381 atgggggtac acagcactaa gaggtgaagt acaaagtact cttcagaaag ccaaggttcc
     1441 attggtgtca aatgaagaat gtcagacaag atacagaaga cacaaaataa ccaataagat
     1501 gatctgtgca ggctacaaag aaggagggaa ggatacgtgc aagggagatt ctggagggcc
     1561 cctgtcctgc aaatacaatg gggtctggca cttggtgggc atcacaagct ggggtgaagg
     1621 ctgtggtcag aaggagagac cgggggtcta cacgaacgtg gccaagtacg tggactggat
     1681 tctggagaaa actcaaacag tctgaaagag ttcaactggt atcactttgt ggccctggaa
     1741 gattattcca tagaaatgag cttgacgtct ctgatgaaga cactgggata ctgactcttc
     1801 cactgtaacc aattgaatgg ccttgatgta cgtaagaaca cccagaaaga aaactattat
     1861 tttcagaatt cctgatctgg gagaaccact ggttgttttc tgcatccagc tactactcaa
     1921 ggaaacaaat acagcaagga gattttaaaa ataaaaacac atcagatata taaggaaaat
     1981 atcaagtaag ggtgctgtct gcctttttag tctctgtgac aaatacctaa agtagttcac
     2041 aaaaggaaaa atttcttttg cacacctttc ctcaggtttc agcctacgat ctggttggct
     2101 ggccccattg ctttagcctg aggtgaggca gaaccatata tccataggag gctgtggaga
     2161 aggagtctgc tcagttcatg gtaggcagga agcaaatgga aacaggaatg tattggggac
     2221 acgaatggtc cttcaagaat atactgtcaa tcatttactt cttccagaga catcctgctc
     2281 cctaacctcc ctttccttcc cagataacac ctctgtccta gctggcccca agagatcagg
     2341 tagaaaggca gaggaaacca tataaagagt tgttaagtgc aaaatcaaaa ccagaaggaa
     2401 tgcagacagg agctcaaaat gtccatttat aagaatcttt ttttttctct gcctatatga
     2461 atccccctcc tgtataaagg actgactcaa ttca
//
