LOCUS       XM_036165396            4041 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus EvC ciliary complex subunit 1 (Evc),
            transcript variant X6, mRNA.
ACCESSION   XM_036165396
VERSION     XM_036165396.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4041
                     /gene="Evc"
                     /note="EvC ciliary complex subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 25 ESTs, 238 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 9 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
     CDS             151..2835
                     /gene="Evc"
                     /codon_start=1
                     /product="evC complex member EVC isoform X4"
                     /protein_id="XP_036021289.1"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
                     /translation="MTCTKDARLQLGREALQAAPTLLVPAVLLGGVLGLGLGLWLGCR
                     ASHLRARLQKDDRKRLLGSSEPPAQSLRDTGSQAKARRRQRETTRDEDAPEVCEPSLS
                     GNITAFALKARVVYPINQKFRPLADGSSHPSLHENLTQAAAILPHLPHQPAEASPASS
                     LGSLSQAGKEDGSSSSSMRSTYSDDRILQCAFLRVGSFPEILACESVDIDLCVCSLHL
                     KDLLQVDTALRQEKHLMFIQILKACLLDFFPKKKPDDELCQKVLSKQEHDLEELEKGL
                     QARLANTEMLGTGDSGYVSLADVERKERELSEQLIDNMGAFWKQMESIQPTLMDQFKC
                     SSSKARQFMMTLTGRMIVAEGLLHDSQDLHVLAFHEVLERQRLTRSDQEGDEDTRITE
                     AMAALCQELYCSTMGTFQKFVDSLFLKTLPEVTSLPVAECETLRQQVQEQAARQLGQA
                     DRFRRRQWGLLCDLLEQDKRVWLEEGTLSTVLQRQLRDHHESTIHGVLSRFSGLSEES
                     SRGILQGHELLLCSALRRLALRGTTITALAQMRLSGKKRLLQELHEQLALEQGVSPCL
                     EEHQWQLLRALEARIQEEAARLEDEAQQTGLRLQQQLLAEAQEAGRLLQLHMERVIGQ
                     ALLVHARNVASKGRTREKEDFKRTLVETVVESVYVTSTSVNRLVQAHYQAVGKLLQAH
                     EEQLLQRLKTLQGERINAYKLWKKQEFSDPSLESQTADGTHGASQGVQQRMLSQQKRL
                     LDQFTKHQQGRLNSQRQKAQELDQLQAQLETQLQEAEQTLISELSTLARVPLPENKPF
                     SNKRGLPEKPVRTKRKKPPPREREDLGTPNDDHLALADHTTGPLSFTSSGWSCIHSTT
                     YSASPPIRVHSGGRLDQQDSEAGDGESTSKILQKGSNL"
ORIGIN      
        1 ctcagtgcac tgtagggatg gcccggaaag gctgaaagtt tggggcggcg ggtccaagct
       61 cctccctcgg ctcgggtgca gcgggaaagg gtacagaggc gcggacctgg ccggcggcgg
      121 gatgcagcgg gtcacccgcc tgagccctcc atgacctgca ctaaagatgc gcggctgcag
      181 ctgggccggg aagccctgca ggcggcgccg acgctgctgg tccccgcggt gctactgggt
      241 ggcgttctcg gcctaggcct tggcttgtgg cttggctgtc gcgcgagcca cttgcgcgca
      301 cggctccaga aagatgacag gaaacgtctg ctcgggagtt cagagccccc tgcacagagc
      361 ctacgggaca ctggctctca agccaaagcc aggaggcgcc agagagaaac cactcgggat
      421 gaagacgccc ctgaggtgtg tgagccatcc ttgagtggca acatcacggc atttgcactg
      481 aaagccagag ttgtctatcc catcaaccag aagttccggc ctctggccga cggatcctcc
      541 cacccatcgc tgcatgaaaa cctgacacag gcagcggcca tcctgcccca cctgccccac
      601 cagccagcag aggcctcacc agccagcagc ctgggcagcc tgagccaggc tggcaaggag
      661 gacggcagct cctcctccag catgcggtca acctacagcg acgaccggat cctccagtgt
      721 gcctttctcc gggtgggcag cttccctgag atcctggcct gtgagagtgt ggacattgac
      781 ctgtgtgtct gcagccttca cctgaaagac ctgcttcagg tagacacggc gctgaggcaa
      841 gagaagcacc tgatgttcat tcagattctt aaagcatgcc tcctggattt ttttcctaaa
      901 aagaagcctg atgatgaatt atgccagaag gttctttcca aacaagagca tgatttggag
      961 gaattagaaa agggactcca ggccagattg gcgaacacag aaatgttagg cactggcgac
     1021 tctggctacg tttccctggc agatgtggag aggaaggaga gagagctctc agagcagctc
     1081 atagacaaca tgggagcttt ctggaagcag atggaaagca tccagcccac tctcatggac
     1141 cagtttaagt gttccagctc caaagctcgg cagttcatga tgactctgac aggaagaatg
     1201 attgtcgctg aaggactgct gcatgactct caggacctgc atgtcctggc ttttcatgag
     1261 gtcctggaga ggcagcggct gacaaggagt gaccaagagg gagacgagga cacccgaatc
     1321 actgaggcca tggctgcgct ctgccaggag ctgtactgta gcaccatggg aaccttccaa
     1381 aagtttgtgg actccctgtt cctgaagacc ctcccagaag tgaccagcct ccctgtggca
     1441 gaatgtgaga ccctgcggca gcaggtccag gagcaggcag caaggcagct gggacaggca
     1501 gaccgattcc gcagacgaca gtggggactc ctatgtgatc tattggagca ggacaaacgg
     1561 gtgtggctgg aggagggtac gctgtccacg gtgctgcaga ggcagctgcg ggatcaccac
     1621 gagagcacca tccacggcgt cctgagcaga ttcagtggcc tttctgaaga gtcctcacga
     1681 ggcatcctgc agggccacga actgctgctg tgctctgctc tgcgcagact ggccctccga
     1741 ggcaccacca tcactgccct ggctcagatg aggctgtctg ggaagaagag gctcctgcag
     1801 gagctacatg agcagctggc attagagcag ggtgtgtccc catgcctgga ggagcatcaa
     1861 tggcagctgc ttagagccct ggaggcgcgg atccaggagg aggcagccag gttggaggat
     1921 gaggcacagc agacaggtct gcggctccag cagcagctgc tggcggaggc acaggaggca
     1981 gggcggctgc tacagctgca catggagcgg gtcattgggc aggcgctgct ggtacatgct
     2041 aggaatgttg ccagcaaagg ccggaccagg gagaaggaag acttcaagag gacgctggta
     2101 gagacggtgg tggagagtgt gtatgtgacc agcactagtg tcaaccgcct cgtgcaggcg
     2161 cattaccagg ccgtcgggaa gctcctgcag gctcatgagg aacaattgct gcagcgccta
     2221 aagaccctgc agggagagag aatcaatgct tacaagctgt ggaagaagca agaattcagt
     2281 gacccgtcgt tggagagtca aacagcggat ggtacccatg gagcttccca gggggtacag
     2341 cagaggatgc tttcgcagca gaagaggctc ctggaccagt tcacgaagca tcagcaaggc
     2401 cgcctgaact ctcagaggca gaaggcacaa gagctggacc agctgcaagc ccagcttgag
     2461 acccagctgc aggaagctga gcagaccctt atctcagagc tatcgacatt ggcccgagta
     2521 ccccttcctg agaacaagcc attctccaac aagcgaggac ttccagaaaa gccagtaaga
     2581 accaaaagga agaaaccccc acctcgggag agagaggacc tggggacacc aaacgatgac
     2641 caccttgcct tggccgacca caccacagga ccactcagtt ttacttcttc tggctggtcc
     2701 tgcatccaca gtacaaccta ctcagcatcg cctcccatcc gtgtccacag cggcggaagg
     2761 ctggatcagc aggacagcga agctggcgat ggagaaagca caagcaagat actgcagaaa
     2821 ggaagcaatc tgtagctcca gctgagatgg gtctgcacgc acctcacttc ctcttgggac
     2881 cgggggacag aagaaaaggc cagtcttgag agaggggatg ccacctgcct tagagagcga
     2941 gacaatagca tcaagtgcct gggatcattg gagatggtgg ggacatgcct tgagaatgta
     3001 acatctccac tgtcacctct ttttggtcct cttgccttgg tctcttgctc cctcagaacg
     3061 gccctcttac ccacaccctc cagtttcaca cagtatcttg atgctgtcta gcagtctgat
     3121 tggagattga agacccctga ttccagcatg catgaagttc tgcccatctg ggtcttagca
     3181 tcactggtat tttcctggcc tgaggccact ggttcacctc cactgctcca cagtcatctc
     3241 ctgtccctgg ttctggctgt cagggtccca accaggacca acttttggcc ttggtatttc
     3301 tatctgttgg ctctgataga aggatgtgtg agtcccaagg ccaatgttct tggcatagcc
     3361 atggagttcc cctggctatg ttctgaacca ctcagaacat ggggaccaca cttgcctgtc
     3421 acataccaca agaggtcctc tgtgggcagg gagggcatag aaggatgctg ttcctaccat
     3481 caggcttcac tgaggagagg aaactttcat ctgaggagat gcccacaggt cacctgcccc
     3541 ttctgaggga tgataagggc ttccgtaagc tttcaaacca gccgtacttc cataggccag
     3601 agatcattcc cactcaggct atctcttcca ggagcagcat caaggattcc ccgtcatcac
     3661 tgtcaacatt tgggtatgat cactcattgt tcaggtgtga acgttgctga tggcaaggat
     3721 ggagtctatc atgtcagagg cagacccatt tggagatggg aggttgtagg tggcacacac
     3781 tgtttcactt gagatgagag ctgtcactca gtgaaaacac accttcaggt tagctgttct
     3841 taggaaacac ctctcgagga acaccatcgt gtctaggagt gacgtttgag gcttttgaga
     3901 gctcctgact aaggacttgg ctggggcagc aaccaacttt ccttcttcct cccctacttc
     3961 catcccccag cctcctgtgc cttaacctcc tgcacgtgag ccaaccctgg ctcagcctga
     4021 ataaagagtt ctactccagg a
//
