LOCUS       XM_011240761            5113 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus EvC ciliary complex subunit 1 (Evc),
            transcript variant X3, mRNA.
ACCESSION   XM_011240761
VERSION     XM_011240761.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011240761.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5113
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..5113
                     /gene="Evc"
                     /note="EvC ciliary complex subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 46 long SRA reads, 2 Proteins, and 95% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 30 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
     CDS             151..3063
                     /gene="Evc"
                     /codon_start=1
                     /product="evC complex member EVC isoform X3"
                     /protein_id="XP_011239063.1"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
                     /translation="MTCTKDARLQLGREALQAAPTLLVPAVLLGGVLGLGLGLWLGCR
                     ASHLRARLQKDDRKRLLGSSEPPAQSLRDTGSQAKARRRQRETTRDEDAPEVCEPSLS
                     GNITAFALKARVVYPINQKFRPLADGSSHPSLHENLTQAAAILPHLPHQPAEASPASS
                     LGSLSQAGKEDGSSSSSMRSTYSDDRILQCAFLRVGSFPEILACESVDIDLCVCSLHL
                     KDLLQVDTALRQEKHLMFIQILKACLLDFFPKKKPDDELCQKVLSKQEHDLEELEKGL
                     QARLANTEMLGTGDSGYVSLADVERKERELSEQLIDNMGAFWKQMESIQPTLMDQFKC
                     SSSKARQFMMTLTGRMIVAEGLLHDSQDLHVLDTLERTMGRSHLARMVEFLRTQIQEE
                     TKCRLAAISRGLELLTVQGQLSGRQKEELLTQQHKAFWEEAERFGREFTQRGKDLVQA
                     SQARQAEAAAELTQTQEEERRSFLADSQLTSDPGEFLKAFHEVLERQRLTRSDQEGDE
                     DTRITEAMAALCQELYCSTMGTFQKFVDSLFLKTLPEVTSLPVAECETLRQQVQEQAA
                     RQLGQADRFRRRQWGLLCDLLEQDKRVWLEEGTLSTVLQRQLRDHHESTIHGVLSRFS
                     GLSEESSRGILQGHELLLCSALRRLALRGTTITALAQMRLSGKKRLLQELHEQLALEQ
                     GVSPCLEEHQWQLLRALEARIQEEAARLEDEAQQTGLRLQQQLLAEAQEAGRLLQLHM
                     ERVIGQALLVHARNVASKGRTREKEDFKRTLVETVVESVYVTSTSVNRLVQAHYQAVG
                     KLLQAHEEQLLQRLKTLQGERINAYKLWKKQEFSDPSLESQTADGTHGASQGVQQRML
                     SQQKRLLDQFTKHQQGRLNSQRQKAQELDQLQAQLETQLQEAEQTLISELSTLARVPL
                     PENKPFSNKRGLPEKPVRTKRKKPPPREREDLGTPNDDHLALADHTTGPLRISKKC"
ORIGIN      
        1 ctcagtgcac tgtagggatg gcccggaaag gctgaaagtt tggggcggcg ggtccaagct
       61 cctccctcgg ctcgggtgca gcgggaaagg gtacagaggc gcggacctgg ccggcggcgg
      121 gatgcagcgg gtcacccgcc tgagccctcc atgacctgca ctaaagatgc gcggctgcag
      181 ctgggccggg aagccctgca ggcggcgccg acgctgctgg tccccgcggt gctactgggt
      241 ggcgttctcg gcctaggcct tggcttgtgg cttggctgtc gcgcgagcca cttgcgcgca
      301 cggctccaga aagatgacag gaaacgtctg ctcgggagtt cagagccccc tgcacagagc
      361 ctacgggaca ctggctctca agccaaagcc aggaggcgcc agagagaaac cactcgggat
      421 gaagacgccc ctgaggtgtg tgagccatcc ttgagtggca acatcacggc atttgcactg
      481 aaagccagag ttgtctatcc catcaaccag aagttccggc ctctggccga cggatcctcc
      541 cacccatcgc tgcatgaaaa cctgacacag gcagcggcca tcctgcccca cctgccccac
      601 cagccagcag aggcctcacc agccagcagc ctgggcagcc tgagccaggc tggcaaggag
      661 gacggcagct cctcctccag catgcggtca acctacagcg acgaccggat cctccagtgt
      721 gcctttctcc gggtgggcag cttccctgag atcctggcct gtgagagtgt ggacattgac
      781 ctgtgtgtct gcagccttca cctgaaagac ctgcttcagg tagacacggc gctgaggcaa
      841 gagaagcacc tgatgttcat tcagattctt aaagcatgcc tcctggattt ttttcctaaa
      901 aagaagcctg atgatgaatt atgccagaag gttctttcca aacaagagca tgatttggag
      961 gaattagaaa agggactcca ggccagattg gcgaacacag aaatgttagg cactggcgac
     1021 tctggctacg tttccctggc agatgtggag aggaaggaga gagagctctc agagcagctc
     1081 atagacaaca tgggagcttt ctggaagcag atggaaagca tccagcccac tctcatggac
     1141 cagtttaagt gttccagctc caaagctcgg cagttcatga tgactctgac aggaagaatg
     1201 attgtcgctg aaggactgct gcatgactct caggacctgc atgtcctgga caccctggag
     1261 aggacaatgg gtcgatccca cttggcaaga atggtggagt tcctgagaac ccagatccag
     1321 gaggagacca agtgcagact tgctgccatc tcccgtggcc tggagttgct gactgtccag
     1381 gggcagctgt ctgggaggca aaaggaggaa ctcctgactc agcagcacaa ggccttctgg
     1441 gaggaggcag agcgttttgg cagggaattc acgcagcggg gcaaagatct ggtccaggcg
     1501 tctcaggctc gccaggcaga ggcagcagca gagctcacac agacccaaga agaagaacgg
     1561 aggagtttcc tggctgattc ccagctgacc tcggatcctg gggaattcct caaggctttt
     1621 catgaggtcc tggagaggca gcggctgaca aggagtgacc aagagggaga cgaggacacc
     1681 cgaatcactg aggccatggc tgcgctctgc caggagctgt actgtagcac catgggaacc
     1741 ttccaaaagt ttgtggactc cctgttcctg aagaccctcc cagaagtgac cagcctccct
     1801 gtggcagaat gtgagaccct gcggcagcag gtccaggagc aggcagcaag gcagctggga
     1861 caggcagacc gattccgcag acgacagtgg ggactcctat gtgatctatt ggagcaggac
     1921 aaacgggtgt ggctggagga gggtacgctg tccacggtgc tgcagaggca gctgcgggat
     1981 caccacgaga gcaccatcca cggcgtcctg agcagattca gtggcctttc tgaagagtcc
     2041 tcacgaggca tcctgcaggg ccacgaactg ctgctgtgct ctgctctgcg cagactggcc
     2101 ctccgaggca ccaccatcac tgccctggct cagatgaggc tgtctgggaa gaagaggctc
     2161 ctgcaggagc tacatgagca gctggcatta gagcagggtg tgtccccatg cctggaggag
     2221 catcaatggc agctgcttag agccctggag gcgcggatcc aggaggaggc agccaggttg
     2281 gaggatgagg cacagcagac aggtctgcgg ctccagcagc agctgctggc ggaggcacag
     2341 gaggcagggc ggctgctaca gctgcacatg gagcgggtca ttgggcaggc gctgctggta
     2401 catgctagga atgttgccag caaaggccgg accagggaga aggaagactt caagaggacg
     2461 ctggtagaga cggtggtgga gagtgtgtat gtgaccagca ctagtgtcaa ccgcctcgtg
     2521 caggcgcatt accaggccgt cgggaagctc ctgcaggctc atgaggaaca attgctgcag
     2581 cgcctaaaga ccctgcaggg agagagaatc aatgcttaca agctgtggaa gaagcaagaa
     2641 ttcagtgacc cgtcgttgga gagtcaaaca gcggatggta cccatggagc ttcccagggg
     2701 gtacagcaga ggatgctttc gcagcagaag aggctcctgg accagttcac gaagcatcag
     2761 caaggccgcc tgaactctca gaggcagaag gcacaagagc tggaccagct gcaagcccag
     2821 cttgagaccc agctgcagga agctgagcag acccttatct cagagctatc gacattggcc
     2881 cgagtacccc ttcctgagaa caagccattc tccaacaagc gaggacttcc agaaaagcca
     2941 gtaagaacca aaaggaagaa acccccacct cgggagagag aggacctggg gacaccaaac
     3001 gatgaccacc ttgccttggc cgaccacacc acaggaccac tcagaatatc caaaaagtgt
     3061 tgaacctgtc ggaatggcta agatacgtaa tacaagtggc agatcatgct ggcgaggtta
     3121 tgaagcacgg ggaccactct cctccactgc tggtgtgagt agaagcttgt acaaccacga
     3181 tgaaaatcaa catggcagtt cctcagaaaa ctggggcttc atctatccca acacccagtg
     3241 ccagtctgtg caccagaaac tatctgcaga gatctgcaga gatctggcca ggctccagtt
     3301 gccagaggct tgcttttcaa aggggagggg aagttgatct aacgctacat ggtgggccaa
     3361 cacagacagg gagggggatt cggatctggg cgagctgccc ggtctcttcc gtggcctcta
     3421 catggagcca gcaaggggaa ggagtctcat gtagcctgcg ggagagaact tgcttcctca
     3481 aaagtgtccc cgctcttaca tgacagacgt tctcagacta tcttagatga aataaccctc
     3541 gcacttgatt ccttctggac agggttttgt atacattttg gggtggtgtg ggctctaaaa
     3601 gcagacgcgt tctattggct tggtctgggg ttttagcaat gcctcatctg cctgtggagg
     3661 ggcttcgggc actgccccta tgtgactgat tgtcagggtt ctctccatgg agtgccatgg
     3721 tcatgtgttc caggacagga aactggtcca gtgtaactaa ttatttcaaa ccttatttct
     3781 catgatggtt attaaacgct ttaacctccc tgtaacctat cacccaccag aggcagtggg
     3841 aaaggaagga tataggggaa gtggacctgt ttagaaaggt tctttggagc aactcccatc
     3901 tgtgttatct ggaaatcggt agttcagttc acaggttagg aggcagtggc agatccactc
     3961 acaagcacct catgggtaca ccaacagtcc aattaggtag aatcaggtta gcaacaatgg
     4021 agacaggacc tagcagagac agccaggcct caaccttggc tcgagacagc aggagggacc
     4081 aagaggaaca ccaggagaag ttctcagctg tgcctctctc agggaatcaa aatcagtaaa
     4141 gactcaagac acatgggctg gagagatggc tcagctgtta aaggctaggc tcacaaccaa
     4201 aaatataaga ctcaagacac aagcattgca cagctagctc tataagcaag cctagctctc
     4261 tctctctctc tctctctctc tctctctctc tctctctctc tcgtgtgtgt ctgtgtgtct
     4321 gagtgtgtgt cactatgtag agtcccattt ataccctcca aacaccacat gtcctccatg
     4381 caccttgctt cagcatgggt cttggctcag cacgtgcatc caatcagcca gagtccgtgg
     4441 aagcagcaag aaattacagt acaccaccag aagtttattg tttgtttgtt tgtttgtttg
     4501 cctcatttct atgaagtccc gacaaatgca gctcaattat gcaatgtaag ataaaccaat
     4561 acatgcatgt tgttagcaga gaatccttca tcacatgtgt ttcacgtgct tgctttagca
     4621 gaacatcctc tctcctatgt ctacttcagc aaaatgctcc ttcatgagtc tgccttagcc
     4681 tttcacacct gtgtccactt taaggaaaca tcccttcatg ggtttgtccc agcaaaacac
     4741 cgtccaactg actttccaaa gaaccctaaa gttcccactt cagtcaggaa taggtgaaac
     4801 ccaccatcct caggtatgag agtgtcaggg tttctgaacc cactagacct taccaagttt
     4861 cctggcacag tccactgccc cagaacccag atataccatt ctttggcata tacccaaagg
     4921 atgctccatc cttccacaag gacacttgtt cacccacatt catagtgact tcattcacaa
     4981 tagccagaaa ctggaaacag ccaagatgtc cctcgaccaa agaacagata aagtgtggta
     5041 tatttgcaca aggtagaact attcagctgt tcaaagcaat gacatcatga aattttcagg
     5101 caaatgcatg gaa
//
