LOCUS       XM_006504042            4335 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus EvC ciliary complex subunit 1 (Evc),
            transcript variant X2, mRNA.
ACCESSION   XM_006504042
VERSION     XM_006504042.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Nov 22, 2023 this sequence was replaced by
            NM_001425650.1.
            
            On Sep 21, 2020 this sequence version replaced XM_006504042.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4335
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4335
                     /gene="Evc"
                     /note="EvC ciliary complex subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 27 ESTs, 259 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
     CDS             151..3129
                     /gene="Evc"
                     /codon_start=1
                     /product="evC complex member EVC isoform X2"
                     /protein_id="XP_006504105.1"
                     /db_xref="GeneID:59056"
                     /db_xref="MGI:MGI:1890596"
                     /translation="MTCTKDARLQLGREALQAAPTLLVPAVLLGGVLGLGLGLWLGCR
                     ASHLRARLQKDDRKRLLGSSEPPAQSLRDTGSQAKARRRQRETTRDEDAPEVCEPSLS
                     GNITAFALKARVVYPINQKFRPLADGSSHPSLHENLTQAAAILPHLPHQPAEASPASS
                     LGSLSQAGKEDGSSSSSMRSTYSDDRILQCAFLRVGSFPEILACESVDIDLCVCSLHL
                     KDLLQVDTALRQEKHLMFIQILKACLLDFFPKKKPDDELCQKVLSKQEHDLEELEKGL
                     QARLANTEMLGTGDSGYVSLADVERKERELSEQLIDNMGAFWKQMESIQPTLMDQFKC
                     SSSKARQFMMTLTGRMIVAEGLLHDSQDLHVLDTLERTMGRSHLARMVEFLRTQIQEE
                     TKCRLAAISRGLELLTVQGQLSGRQKEELLTQQHKAFWEEAERFGREFTQRGKDLVQA
                     SQARQAEAAAELTQTQEEERRSFLADSQLTSDPGEFLKAFHEVLERQRLTRSDQEGDE
                     DTRITEAMAALCQELYCSTMGTFQKFVDSLFLKTLPEVTSLPVAECETLRQQVQEQAA
                     RQLGQADRFRRRQWGLLCDLLEQDKRVWLEEGTLSTVLQRQLRDHHESTIHGVLSRFS
                     GLSEESSRGILQGHELLLCSALRRLALRGTTITALAQMRLSGKKRLLQELHEQLALEQ
                     GVSPCLEEHQWQLLRALEARIQEEAARLEDEAQQTGLRLQQQLLAEAQEAGRLLQLHM
                     ERVIGQALLVHARNVASKGRTREKEDFKRTLVETVVESVYVTSTSVNRLVQAHYQAVG
                     KLLQAHEEQLLQRLKTLQGERINAYKLWKKQEFSDPSLESQTADGTHGASQGVQQRML
                     SQQKRLLDQFTKHQQGRLNSQRQKAQELDQLQAQLETQLQEAEQTLISELSTLARVPL
                     PENKPFSNKRGLPEKPVRTKRKKPPPREREDLGTPNDDHLALADHTTGPLSGGRLDQQ
                     DSEAGDGESTSKILQKGSNL"
ORIGIN      
        1 ctcagtgcac tgtagggatg gcccggaaag gctgaaagtt tggggcggcg ggtccaagct
       61 cctccctcgg ctcgggtgca gcgggaaagg gtacagaggc gcggacctgg ccggcggcgg
      121 gatgcagcgg gtcacccgcc tgagccctcc atgacctgca ctaaagatgc gcggctgcag
      181 ctgggccggg aagccctgca ggcggcgccg acgctgctgg tccccgcggt gctactgggt
      241 ggcgttctcg gcctaggcct tggcttgtgg cttggctgtc gcgcgagcca cttgcgcgca
      301 cggctccaga aagatgacag gaaacgtctg ctcgggagtt cagagccccc tgcacagagc
      361 ctacgggaca ctggctctca agccaaagcc aggaggcgcc agagagaaac cactcgggat
      421 gaagacgccc ctgaggtgtg tgagccatcc ttgagtggca acatcacggc atttgcactg
      481 aaagccagag ttgtctatcc catcaaccag aagttccggc ctctggccga cggatcctcc
      541 cacccatcgc tgcatgaaaa cctgacacag gcagcggcca tcctgcccca cctgccccac
      601 cagccagcag aggcctcacc agccagcagc ctgggcagcc tgagccaggc tggcaaggag
      661 gacggcagct cctcctccag catgcggtca acctacagcg acgaccggat cctccagtgt
      721 gcctttctcc gggtgggcag cttccctgag atcctggcct gtgagagtgt ggacattgac
      781 ctgtgtgtct gcagccttca cctgaaagac ctgcttcagg tagacacggc gctgaggcaa
      841 gagaagcacc tgatgttcat tcagattctt aaagcatgcc tcctggattt ttttcctaaa
      901 aagaagcctg atgatgaatt atgccagaag gttctttcca aacaagagca tgatttggag
      961 gaattagaaa agggactcca ggccagattg gcgaacacag aaatgttagg cactggcgac
     1021 tctggctacg tttccctggc agatgtggag aggaaggaga gagagctctc agagcagctc
     1081 atagacaaca tgggagcttt ctggaagcag atggaaagca tccagcccac tctcatggac
     1141 cagtttaagt gttccagctc caaagctcgg cagttcatga tgactctgac aggaagaatg
     1201 attgtcgctg aaggactgct gcatgactct caggacctgc atgtcctgga caccctggag
     1261 aggacaatgg gtcgatccca cttggcaaga atggtggagt tcctgagaac ccagatccag
     1321 gaggagacca agtgcagact tgctgccatc tcccgtggcc tggagttgct gactgtccag
     1381 gggcagctgt ctgggaggca aaaggaggaa ctcctgactc agcagcacaa ggccttctgg
     1441 gaggaggcag agcgttttgg cagggaattc acgcagcggg gcaaagatct ggtccaggcg
     1501 tctcaggctc gccaggcaga ggcagcagca gagctcacac agacccaaga agaagaacgg
     1561 aggagtttcc tggctgattc ccagctgacc tcggatcctg gggaattcct caaggctttt
     1621 catgaggtcc tggagaggca gcggctgaca aggagtgacc aagagggaga cgaggacacc
     1681 cgaatcactg aggccatggc tgcgctctgc caggagctgt actgtagcac catgggaacc
     1741 ttccaaaagt ttgtggactc cctgttcctg aagaccctcc cagaagtgac cagcctccct
     1801 gtggcagaat gtgagaccct gcggcagcag gtccaggagc aggcagcaag gcagctggga
     1861 caggcagacc gattccgcag acgacagtgg ggactcctat gtgatctatt ggagcaggac
     1921 aaacgggtgt ggctggagga gggtacgctg tccacggtgc tgcagaggca gctgcgggat
     1981 caccacgaga gcaccatcca cggcgtcctg agcagattca gtggcctttc tgaagagtcc
     2041 tcacgaggca tcctgcaggg ccacgaactg ctgctgtgct ctgctctgcg cagactggcc
     2101 ctccgaggca ccaccatcac tgccctggct cagatgaggc tgtctgggaa gaagaggctc
     2161 ctgcaggagc tacatgagca gctggcatta gagcagggtg tgtccccatg cctggaggag
     2221 catcaatggc agctgcttag agccctggag gcgcggatcc aggaggaggc agccaggttg
     2281 gaggatgagg cacagcagac aggtctgcgg ctccagcagc agctgctggc ggaggcacag
     2341 gaggcagggc ggctgctaca gctgcacatg gagcgggtca ttgggcaggc gctgctggta
     2401 catgctagga atgttgccag caaaggccgg accagggaga aggaagactt caagaggacg
     2461 ctggtagaga cggtggtgga gagtgtgtat gtgaccagca ctagtgtcaa ccgcctcgtg
     2521 caggcgcatt accaggccgt cgggaagctc ctgcaggctc atgaggaaca attgctgcag
     2581 cgcctaaaga ccctgcaggg agagagaatc aatgcttaca agctgtggaa gaagcaagaa
     2641 ttcagtgacc cgtcgttgga gagtcaaaca gcggatggta cccatggagc ttcccagggg
     2701 gtacagcaga ggatgctttc gcagcagaag aggctcctgg accagttcac gaagcatcag
     2761 caaggccgcc tgaactctca gaggcagaag gcacaagagc tggaccagct gcaagcccag
     2821 cttgagaccc agctgcagga agctgagcag acccttatct cagagctatc gacattggcc
     2881 cgagtacccc ttcctgagaa caagccattc tccaacaagc gaggacttcc agaaaagcca
     2941 gtaagaacca aaaggaagaa acccccacct cgggagagag aggacctggg gacaccaaac
     3001 gatgaccacc ttgccttggc cgaccacacc acaggaccac tcagcggcgg aaggctggat
     3061 cagcaggaca gcgaagctgg cgatggagaa agcacaagca agatactgca gaaaggaagc
     3121 aatctgtagc tccagctgag atgggtctgc acgcacctca cttcctcttg ggaccggggg
     3181 acagaagaaa aggccagtct tgagagaggg gatgccacct gccttagaga gcgagacaat
     3241 agcatcaagt gcctgggatc attggagatg gtggggacat gccttgagaa tgtaacatct
     3301 ccactgtcac ctctttttgg tcctcttgcc ttggtctctt gctccctcag aacggccctc
     3361 ttacccacac cctccagttt cacacagtat cttgatgctg tctagcagtc tgattggaga
     3421 ttgaagaccc ctgattccag catgcatgaa gttctgccca tctgggtctt agcatcactg
     3481 gtattttcct ggcctgaggc cactggttca cctccactgc tccacagtca tctcctgtcc
     3541 ctggttctgg ctgtcagggt cccaaccagg accaactttt ggccttggta tttctatctg
     3601 ttggctctga tagaaggatg tgtgagtccc aaggccaatg ttcttggcat agccatggag
     3661 ttcccctggc tatgttctga accactcaga acatggggac cacacttgcc tgtcacatac
     3721 cacaagaggt cctctgtggg cagggagggc atagaaggat gctgttccta ccatcaggct
     3781 tcactgagga gaggaaactt tcatctgagg agatgcccac aggtcacctg ccccttctga
     3841 gggatgataa gggcttccgt aagctttcaa accagccgta cttccatagg ccagagatca
     3901 ttcccactca ggctatctct tccaggagca gcatcaagga ttccccgtca tcactgtcaa
     3961 catttgggta tgatcactca ttgttcaggt gtgaacgttg ctgatggcaa ggatggagtc
     4021 tatcatgtca gaggcagacc catttggaga tgggaggttg taggtggcac acactgtttc
     4081 acttgagatg agagctgtca ctcagtgaaa acacaccttc aggttagctg ttcttaggaa
     4141 acacctctcg aggaacacca tcgtgtctag gagtgacgtt tgaggctttt gagagctcct
     4201 gactaaggac ttggctgggg cagcaaccaa ctttccttct tcctccccta cttccatccc
     4261 ccagcctcct gtgccttaac ctcctgcacg tgagccaacc ctggctcagc ctgaataaag
     4321 agttctactc cagga
//
