LOCUS       XM_011241208            5067 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ets variant 6 (Etv6), transcript variant
            X3, mRNA.
ACCESSION   XM_011241208
VERSION     XM_011241208.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011241208.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5067
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..5067
                     /gene="Etv6"
                     /gene_synonym="Tel"
                     /note="ets variant 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 26 ESTs, 401 long
                     SRA reads, 11 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 16 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:14011"
                     /db_xref="MGI:MGI:109336"
     CDS             118..1446
                     /gene="Etv6"
                     /gene_synonym="Tel"
                     /codon_start=1
                     /product="transcription factor ETV6 isoform X1"
                     /protein_id="XP_011239510.1"
                     /db_xref="GeneID:14011"
                     /db_xref="MGI:MGI:109336"
                     /translation="MEEDSIHLPTHLRLQPIYWSRDDVAQWLKWAENEFSLRPIESNK
                     FEMNGKALLLLTKEDFRYRSPHSGDVLYELLQHILKQRKSRMLFSPFFPPGDSIHTKP
                     EVLLHQNHDEDNCVQRTPRTPAESVHHNPPTIELLHRPRSPITTNHRPSPDPEQQRPQ
                     RSPLDNMSRRLSPVEKAQGPRLQQENNHQETYPLSVSPVENNHCLPSSPWQESTRVIQ
                     LMPSPIMHPLILNPRHSHSVDFKQSRHSEDGMNREGKPINLSHREDLAYLNHIMVSMS
                     PPEEHAMPIGRIADCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWG
                     NHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQRLLFRFMKTPDEIMSGRTDRLEHLES
                     QVLDEQTYQEDEPTIASPVGWPRGNLPTGTAGGVMEAGELGVAVKEETRE"
ORIGIN      
        1 tcgagacagt tcctggcaga gcaggaacga atttcataca cgcccccaga gagtccagtg
       61 gcaagccacc gttcctcgac tccgcttcat gttcacacag tgcctcgagc gctcaggatg
      121 gaggaagact cgatccacct gccaacacac ctgcgtttgc agccgattta ctggagcaga
      181 gatgacgtag cccagtggct caagtgggca gaaaatgagt tttctttaag gcccattgag
      241 agcaacaagt tcgaaatgaa tggcaaggcc ctcctgctgc tgaccaaaga ggatttccgc
      301 taccgatctc ctcattcagg cgacgtgctc tatgaactcc ttcagcatat cctgaagcag
      361 aggaaatctc gaatgctctt ctcaccattc ttcccccctg gggactctat ccacaccaag
      421 ccagaggtcc tcctgcatca gaaccatgac gaagataact gtgtccagag gacacccagg
      481 acgcccgcgg agagcgtgca ccacaaccct cccaccatcg aactcttaca tcgccctagg
      541 tcacccatca ccacaaacca caggccttct cctgaccccg aacagcagcg gccccagcgg
      601 tcccccctag acaacatgag ccgccgcctc tcgccagtgg agaaagccca ggggcccagg
      661 ctacagcagg agaacaacca ccaggaaacg taccccctgt cagtgtctcc tgtcgagaat
      721 aatcactgcc tgccctcaag cccctggcag gagagcactc gagtgatcca gctgatgccc
      781 agccccatca tgcacccttt gatcctgaac ccccggcact cgcactcggt ggacttcaaa
      841 cagtcccggc actccgagga tgggatgaat cgggaaggga agcccatcaa cctgtctcat
      901 cgggaggacc tggcttactt gaaccacatc atggtctcta tgtccccacc ggaagagcac
      961 gccatgccca ttgggagaat agcagactgt agactgcttt gggattatgt ctatcagttg
     1021 ctgtctgaca gccggtacga aaacttcatc cgatgggagg acaaagaatc caaaatattc
     1081 cggatagtgg atcccaacgg actggctcga ctctggggaa accataagaa cagaacaaac
     1141 atgacctatg agaaaatgtc cagagccctg cgccactact acaaactaaa cattatcagg
     1201 aaggagcccg gacaaaggct tttgttcagg ttcatgaaaa ccccagatga gatcatgagt
     1261 ggccggacag accgtctaga acacctcgag tctcaagtgc tggatgaaca aacgtaccaa
     1321 gaggatgaac ctaccatagc ctcaccggtg ggctggccaa gaggaaacct gcccacgggg
     1381 accgcaggag gcgtgatgga agcaggcgag ctaggggtgg ctgtaaagga agagacccgg
     1441 gaatagcagg gacacttctc ctgccgatca agagggaccc agagcacctt agacaagcca
     1501 ccgagcaatg gcagggctga agttctggcg gagggcacaa gcctgagact cacacgtcac
     1561 gttcgcttct ccttctgatc tcttgtctgt aactctcacc ctctcccttc ccctacacct
     1621 gttgtagtct catggtgttt ctggtttcgt tttttgtttt tgttttttaa gaacatgcag
     1681 tttgactatt cattgttcat acagggaaga catcacatgt tgttttccta tggaaatata
     1741 tctattatat atatattatt aatttttttg ttgttgttgc aaatctcacc aagtacggcc
     1801 agcttggctg gtcaggaaag agaaaacttg cagaaggaat caggttcctc tttttcctgc
     1861 cacatagatc tggtgtgtcc tgtccaagtc aggtcttaga tgagaaagga aaacaaaatg
     1921 agagagatac tttcaaacaa tggaaaagaa gagttctgtc tccatctccc tctctcgccg
     1981 ctcatccccg cccctttctc cttccccctt ctctgcctgc tatgcacttc acaggctttt
     2041 catcagagct agcctcacta gcacctgaac tacacagtga cccggctgct ctgtgacagt
     2101 cagacccctt gggcacccat ctgaggaagg ccagacatct ccccccacca aatgctgctg
     2161 tattctagaa agaacaatgg gaggatcgag cataagatag gacagagggt ggccacagga
     2221 tttgcaaggc ccaggcagtt tgggattgtc ctgaaagtgc tacacattag gaaaatatga
     2281 gagaccacac aggcctggta gtttaggagc aagaacaggt caccaatgtt gtcccaagac
     2341 atcatgccct tgtgggattg tcaccacccc acacacacac tccaagtcct agcctttttc
     2401 ttctatgctg gtcctcatgg aacacagaac acacatgagg gaggatgctg gaatttagtc
     2461 tcaggcacag ccggtatttg cgcagacagg aaattcctca gatttagact ttttcctttt
     2521 ttccgtctgt catggctgta tttcaggagg acatatctgt ggctcttctc cacctcgaca
     2581 taaggtcagt agcatcttcc aagatgaggg taatgctatt ccttaggatt tttgatagca
     2641 gggattttat tttatttatt tatttatttt tgggattttt ttttttgaga cagggttttt
     2701 ctgtgtatcc ctggaattca ctctgtagac cagactagga ctcagagatc tacctgcctc
     2761 tgcctcccaa gcactgagat taaaggtgtg cgcccccatg cttagctttt tttccttttc
     2821 tagccatcta agtggactct ttgaagttca ctgttttaaa acccagataa tgaggcctgc
     2881 ctttcaaaac caccccttgt ccttcctgtg ttctcccaca tcatggaatg agcctctccc
     2941 agccctcctg ggtgtgtctc tgcttggtca gacgcaggac acaggtgagg ctgacagacc
     3001 agagctgacc tacaactact cctaagtggg gcacatagag gctaggagga cctggacaag
     3061 tcactctccc gacgtcagct cacaggcgga ctgtggttca cagacactgg aattgagttg
     3121 actgggtatc tttagtcttg ctgtgacttc cccgtgcctc ccccacaacc cacaatctgc
     3181 cttcaaagag gtcagtgacc tgggtgaggg gttccctctt aatattcatg gggaatgatg
     3241 agagtcacgt gctatgtgtt tcttgaaagc atgacagggg ttcctttttt tggcctctaa
     3301 aaatgactgg taccttatat caaatgggga gattaagcca aatacttgtg ttgtatgagc
     3361 cactgggagg aagagcaagt gagaaagggt gtgctttttg tttttgtttt gactgaggtc
     3421 ctttgtgtga atataaaatg agaaactaca acacttcata ctggccactt tgcccatgcg
     3481 tagaactcag tcctttaact gcccaaagaa ttgtccatat gaactgtgta aggaaattcc
     3541 tctgttccct aaggagtctt ggatgacagc tttggccact tacgttagaa atgctcatgg
     3601 cagtgccgtc tttatttcac acctggtgtt gccataattg atttctttga ttctcttacc
     3661 tgcaaaagcc cttgtttgtt ttttggagag aaaatatggc cagggttgtc tgggttgtca
     3721 gggttgtgca gtgctctcag gcttcagact cacagaattt agatttagcc aatcagacct
     3781 tggaggaaac accacaatgg gggtcctgtt ttgtcttttt ggtttttgag ttttggtttt
     3841 ttgtttgttt gtttttttac aatcaactat gatcttctag atcgacatta aagcgacatt
     3901 aagttcaaga ggtgatagaa ggaatctaaa agctccttta gtggcctttt tctgcagcca
     3961 ttgtgggttg agtcaggaaa ggaatttgca gggaagcatt gccatgtgga ggatgggcat
     4021 tgccacctag gtcctgggat tctgtcctga gtcctcggcc gggctgtctt caggtctcct
     4081 tcagcagaaa ccaggggcag ctggtcagat gttgacagca gcttctcttc cgataatttt
     4141 catccaaggc cacttagtgc cacttggaga cagggtccct gatgtcccat atctggtttt
     4201 ggaaagagaa tggtcctcat aagaaaagaa caaaacaggc ttcttgccta gtacattcag
     4261 gtccctctga tccagcatct ttttacacta ataccttgtc cagataagaa tgtcactcca
     4321 gctgacatct agatgtctgt gaggagtccc tggaatgacc actcttgtct tttcacactg
     4381 ttcgggatcc aaccataaac acagtttggc ccattcactg ttgttggcag aagacaacct
     4441 gagagaggtc gtgtcacttt ccgtgggagc agacagcatg acacacagtt gggatcagta
     4501 tctagccggc ctgcacttag cagcaggata agcgttcaga aggcagttag aaattattct
     4561 ggtttaaacc cccatttgat ccatccccgg caaagagacg aaagatgcca agggtggttt
     4621 ttactgccca gtcattcggt gctagttaga gctgctgtgc gttctcagcc tgctcctctt
     4681 ctgaacagaa accaaaattg gacgtcatga gaaacccagt ggagcagggg tacagaggga
     4741 caccccagaa ccctgcctat caacaaggca cacgggactc acccagcact cttttggccc
     4801 catccgcatc aacactaaac aacttcaaat gcgcccgact cttttcaccc tcacaggtga
     4861 accctcttct ggagacttct ctttgtgacg gcacccacct gcaagccaga tgaatctaga
     4921 atgacttttt gttgttgttg ttgtttagtt tctaatctct tgtttatgag gtgtggggtt
     4981 tataagggac tgaatcaaat gaatgtaaca aaaaaagaaa aaaaaacaaa caaaaaatgc
     5041 cttttctcag ggccagtgag ttgcaaa
//
