LOCUS       XM_006532462            4164 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ets variant 4 (Etv4), transcript variant
            X5, mRNA.
ACCESSION   XM_006532462
VERSION     XM_006532462.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532462.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..4164
                     /gene="Etv4"
                     /gene_synonym="Pea-3; Pea3"
                     /note="ets variant 4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 15 ESTs, 1646
                     long SRA reads, 12 Proteins, and 77% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     35 samples with support for all annotated introns"
                     /db_xref="GeneID:18612"
                     /db_xref="MGI:MGI:99423"
     CDS             2082..3545
                     /gene="Etv4"
                     /gene_synonym="Pea-3; Pea3"
                     /codon_start=1
                     /product="ETS translocation variant 4 isoform X5"
                     /protein_id="XP_006532525.1"
                     /db_xref="GeneID:18612"
                     /db_xref="MGI:MGI:99423"
                     /translation="MERRMKGGYLDQRVPYTFCSQKSPGNGSLGEALMVPQGKLMDPG
                     SLPPSDSEDLFQDLSHFQETWLAEAQVPDSDEQFVPDFHSENLAFHSPTTRIKKEPQS
                     PRTDPALSCSRKPPLPYHHGEQCLYSSAYDSPRQIAIKSPAPGAPGQSPLQPFSRAEQ
                     QQSLLRASSSSQSHPGHGYLGEHSSVFQQPVDMCHSFTSPQGGGREPLPAPYQHQLSE
                     PCPPYPQQNFKQEYHDPLYEQAGQPASSQGGVSGHRYPGAGVVIKQERTDFAYDSDVP
                     GCASMYLHPEGFSGPSPGDGVMGYGYEKSLRPFPDDVCIVPEKFEGDIKQEGIGAFRE
                     GPPYQRRGALQLWQFLVALLDDPTNAHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPA
                     MNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPALKAEFDRP
                     VSEEDTVPLSHLDESPAYLPELTGPAPPFGHRGGYSY"
ORIGIN      
        1 tagcttgagc cagagatagg gaggtaggct tctttggtct ctgccagacc tgggaagcag
       61 aggaaatatt aactagccag ggctctccag agaagtggag gaactccgag tcagacaggc
      121 agccccggac aggcctcaac tggagcaccc agtgctcact cagggaccca cctgaacctt
      181 catggagacc acatcagaga tcttttccta gaactgcctg ccttcctccc ccacttctcc
      241 tggtctagga actcacaccc ctccctaaac tggctccatc cgccccaagc cgggatttgc
      301 ttgggcttgc ctgtctttcc ttgggcaggg tgcctgcaaa actccattac ttagcttttt
      361 attgtagctg ttcacctgac aggcattttg tgcaactctt gagtgcgagc gaggctcaag
      421 gaaggagtcc tcctctgggc ccccgcagag atccccataa ctatataggg atttctctaa
      481 cagggaagag aatgaaagat acctcaccat atatatggac tgacccaggc tctcatgaaa
      541 aggggggtcc ctagaggaga gcggcagcag gttcaaactt taaagaacag tttggtaggt
      601 aaaggggagg agtttgtgtg gcagaaagag cccagttcag gtgccagggg gttaaggttt
      661 ttgtcccttc tctgactcct acaggctgga agagattgca tgcacctttt ctttctcaga
      721 agtactgttt ggttagacag atgaactttg aaagcagccc tgtgggcctg tgggtccttg
      781 tgacggcatc taaagcaacc cagatcccaa gggaggtagt ctttctcaca cttgcttggc
      841 gcccagcacc atgtctgaca cagcagatat ttactgaagg cagtgatgct cgaatgacaa
      901 acactaagat caacctcttg gacaaaattg gaacccatcc tgtcttttga tcaccaagtc
      961 acttgggatt tctgcttcct atcataagga gtaagatggc agcgagagag acatccttga
     1021 gcctcttgtt ggcaaagcct cgaatgaatg ataaagcggg tcacagaata agcaactcta
     1081 cagatcacag acccgtgaga aagccggttt gagccagttt acatttactg agcaccaact
     1141 gtgcctccat ttgttttcaa gtagctcggg gtctcagagg gctgcacaga agaccttggt
     1201 ggctttgaaa cgctaatgcc cctcagtgac aagctgagtt acctcaggtg aggaggccat
     1261 ggtgtctttc ttagctttct tccattttca tttgtaaagt aaaatggaaa ccgctccgca
     1321 gcaccacgtt atgggaagga aattagcacg tggaggcaga gcgcttcata aatgctagtt
     1381 attatggttc ctctgggcgc acaagtccgt ttgcctcccc ctccccccag ggcacacaga
     1441 cgtgttcaca ctcccacgta agtatagatg cacagaggcg tgagctaacg ccagcggaag
     1501 gagctcaggg gtccttagac ccaaaaccca ggttggaacc cgtggagaag ctgccgggtc
     1561 ttcagcttcc gtcttttttt ctcaattctt tatgaatgaa ctaaagccga aaggagttta
     1621 tttttttatg aatggaagtc caaaaagtga atgaagccag gagccagccc ctactttctg
     1681 attggtcttc gtggctggga aactcctccc tcaagctcag ctagccgagt ctgaggattg
     1741 gcgggcgtgc ccggccctgg ggtttcattc acaaaagtca atgaaacaaa gggaaccggt
     1801 ggggaggggc gggggaagag cgagaacgga ggccaaggca aaggaaatgc accaatcagc
     1861 tgctcccccg ggctcacaac tgtctgctgc gcccggaaaa caagccgggg ctctggggac
     1921 ccggggctca ggccgcctcg ctccggccta gccccgccac cttagttgtg tcatcccccg
     1981 ggcatgctga gcatcccccc gcggctccgg cacagacgcc cggacctcag gtctctgcct
     2041 ccgcgcgggg gcccggccct gtggccggag ggagcggccg gatggagcgg aggatgaaag
     2101 gcggatactt ggaccagcga gtgccctaca ccttctgcag ccagaaatct cccggaaatg
     2161 ggagcttggg cgaagcgctg atggtcccgc agggaaagct catggacccg ggctccctgc
     2221 cgccttccga ctcagaagat ctcttccagg acctcagtca cttccaagag acgtggctcg
     2281 cagaagctca ggtaccggac agtgatgagc agtttgttcc tgatttccat tcagaaaact
     2341 tagctttcca tagccccacc accaggatca agaaggaacc ccagagtccc cgcacagacc
     2401 ccgccctgtc ctgcagcagg aagccaccac tcccctacca ccatggagag cagtgccttt
     2461 actccagtgc ctatgactcc cccagacaaa tcgccatcaa gtcccccgcc cccggtgccc
     2521 ctggacagtc gcccctgcag cccttttcca gggcagaaca gcagcagagc ctcctgagag
     2581 cctccagctc ttcccagtcc caccctggcc acgggtacct tggtgagcac agctccgtct
     2641 tccagcagcc cgtggacatg tgccactcct tcacatctcc tcagggaggg ggccgggaac
     2701 ctctcccagc cccctatcaa caccaactgt cggagccctg cccaccctac ccccagcaga
     2761 acttcaagca ggagtaccat gaccccctgt acgaacaggc tggccagccc gcttcaagcc
     2821 agggtggggt cagtgggcac aggtacccag gggcgggggt ggtgatcaaa caggagcgca
     2881 cagacttcgc ctacgactca gatgtccctg gatgtgcatc aatgtacctc cacccagagg
     2941 gcttctctgg accctctcca ggtgatggag tgatgggtta tggctatgaa aaatcccttc
     3001 gaccattccc agatgatgtc tgcattgtcc ctgaaaaatt tgaaggagac atcaagcagg
     3061 aagggattgg agctttccgg gaggggccac cctaccagcg ccggggtgcc ttacaactgt
     3121 ggcagtttct ggtggccctg ctggatgacc caacaaatgc tcatttcatt gcttggacag
     3181 gccggggaat ggagtttaaa ctaattgaac ctgaagaggt tgccaggctc tggggtatcc
     3241 agaagaaccg gccagccatg aattatgaca agctgagccg ctcgctgcga tactattatg
     3301 agaaaggcat catgcagaag gtggctggcg aacgctacgt gtacaagttt gtgtgcgagc
     3361 cggaggccct gttctctctg gccttcccag ataatcaacg tccagctctg aaggctgagt
     3421 ttgaccggcc agtcagtgag gaggacacag tccctttgtc ccacttggat gagagtcctg
     3481 cctacctccc agaactcact ggccccgctc cgcccttcgg ccacagaggt ggatattctt
     3541 actaggcacc agtggcttcc ccttgacatg gtggggttgc tcagtgtata tatcaactga
     3601 tttggtattg gtgaaggccc tctttctgat gcctgtagaa gtctctgggg tcagagctcc
     3661 actatcccat ctgatactcc tggccagact cagctgctaa ccagagtctg cgggaaagac
     3721 agtggaggca ggccaaatct aaaggcagta gccgaagttc gctgtggctc acctgtacct
     3781 tcagttcagc ttggcctctg cctaggtctt gctcagaggc caagttcctc acccccacca
     3841 cagagatcca gtgttctatt ctggggacat acagggactt cccttgttta ttatggcaac
     3901 agggccaagg ggattctcag aacaccctgt gtctcccctc tcccaacccc ccatgggaga
     3961 caaagttctg cctgggttct gccctgaaca ggggggtcct gtgttcttgg tgctgtgctc
     4021 tgggaggcag gagcatgtgg gcggcagctg gggggggggg ttgggtggaa gagtagggat
     4081 ggctctctgc cctaggccta cccaggccta attccacctt tgcctcttat gccagacctt
     4141 aataaagcct ctgcttctcc ggtt
//
