LOCUS       NM_001370856            1832 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus ets variant 3-like (Etv3l), mRNA.
ACCESSION   NM_001370856 XM_006502500
VERSION     NM_001370856.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from AC139241.4.
            
            On Jun 6, 2019 this sequence version replaced XM_006502500.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849383,
                              SAMN01164136 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-179               AC139241.4         145407-145585       c
            180-285             AC139241.4         140823-140928       c
            286-523             AC139241.4         140494-140731       c
            524-710             AC139241.4         140107-140293       c
            711-822             AC139241.4         139572-139683       c
            823-1832            AC139241.4         134537-135546       c
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 38.19 cM"
     gene            1..1832
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /note="ets variant 3-like"
                     /db_xref="GeneID:546801"
                     /db_xref="MGI:MGI:3646099"
     exon            1..179
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
     exon            180..285
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
     CDS             225..1289
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /note="ets variant gene 3-like"
                     /codon_start=1
                     /product="ETS translocation variant 3-like protein"
                     /protein_id="NP_001357785.1"
                     /db_xref="GeneID:546801"
                     /db_xref="MGI:MGI:3646099"
                     /translation="MYCNCFSEGILAAPVNHWVSGLAFPDWAYKAESSPGSRQIQLWH
                     FILELLQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYY
                     YNKRILHKTKGKKFTYKFNFSKLMVANCPPWKVWAPPSPRLLLRSPALCQPLVPMAKQ
                     SEPLYSMLCTRATETQPAGERTPQRPPKASGDKESSSFNCFGSVLGPGWQRPCCCLRN
                     LQGGLPSPAPLASVPCLCCNWTHLLGPILPPLPSEQSLSGSSKPGPRLSGPMCMPGTW
                     HFPGLHLLARLRQNTGQGLWCQFLRPEELVVNPGPGPSRHLDSNEGLSSGTQGLKLGK
                     GISMSPNPENMRVMWPSDPP"
     exon            286..523
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
     exon            524..710
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
     exon            711..822
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
     exon            823..1832
                     /gene="Etv3l"
                     /gene_synonym="EG546801"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcatcgag ccgtgccact ggctctcaaa gggttaatgg tgctgtctgc aaacgacctt
       61 ggctcccctg ggagcttgga gatccccgct ctcattttaa gtaaccctaa cgcgatgagc
      121 aagggcaagg agcgagtcag aaggaaccag actgcgcgca gaattgatga tccaaagcgc
      181 aggccttcag ttcaaactca accctctctc gcctaccact caccatgtac tgcaactgct
      241 tctcagaagg catcctggct gcccctgtca accactgggt ctcaggtctg gccttccccg
      301 attgggccta caaagctgag tcgtctccgg gctcccggca gatccagctg tggcacttca
      361 tcctggaact gctgcagaag gaagagttcc gccatgtcat cgcctggcag cagggagagt
      421 acggggagtt tgtcatcaag gatccagatg aagtggctcg cctctggggc cgcaggaagt
      481 gcaaaccaca gatgaactat gacaagctga gccgggccct caggtattac tacaacaaga
      541 ggatcctgca caagaccaaa ggcaagaagt ttacctacaa gttcaacttc agcaagctca
      601 tggtagccaa ctgccctccg tggaaagtgt gggcaccccc cagccctcgc ctgctgctga
      661 ggtcccctgc cctgtgtcag cccttggtgc ctatggctaa gcagagtgag cccctgtata
      721 gcatgctgtg cacacgggcc acagaaactc agccagctgg agagaggacc ccacagagac
      781 caccaaaggc ctctggggac aaggagagca gcagcttcaa ctgttttggc tctgtcctgg
      841 gcccaggctg gcagaggcct tgctgctgtc tccggaacct ccaaggtggc ctgcccagcc
      901 ctgctcccct tgcttctgtg ccctgcctct gctgtaactg gacccacctc ttggggccca
      961 tcttgcctcc tcttccctca gagcagtcac tttcggggtc ctcaaagcct ggtcctcggc
     1021 tctcaggccc catgtgtatg ccaggtacct ggcattttcc agggctccac cttctggcca
     1081 ggctgagaca gaacactggc caggggcttt ggtgccagtt tctcaggccc gaggaattgg
     1141 tggtaaatcc tggcccaggg ccaagcaggc atctggattc caatgaggga ctctcctcag
     1201 ggactcaggg actcaaactt gggaaaggaa tctccatgtc ccccaatcca gagaacatga
     1261 gagtcatgtg gccttctgat cctccttaat tggagagaaa gaagtgaagg ggtggctctt
     1321 ccccctgtct cctgttcccc cactggaggc tctgaagggt gaagttgaac caagggcaaa
     1381 tgtgggcatg gggaaatgga gatggcaccc ctcccctata ccaaattgct atctgactaa
     1441 ggagacatta ttaattaact ttttttggag agaaatgaga ttaggagttt ctatcattaa
     1501 aactgccccc tgcctactca caggagggga tgaaggggct gggctggggc agaccagcgt
     1561 ttgtttggct taagtcttag gatctctttc ttcctctggg ttcacttccc catcctggct
     1621 aaggtttccc aggacctctc acagcccttc ccatacttct ctgccctccc cttgactgca
     1681 cagccactag gaacctctgt tccagggagg gtcttgcttc tatgaaggaa ggttctgtgc
     1741 ttctatctcc atgaccccaa gatgcaggca ggggcacaga gagggagggg tggttctctc
     1801 atctctgtaa cactccactg ccaactgtga at
//
