LOCUS       XM_006514966            6250 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ets variant 1 (Etv1), transcript variant
            X3, mRNA.
ACCESSION   XM_006514966
VERSION     XM_006514966.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006514966.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6250
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..6250
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /note="ets variant 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 11 ESTs, 2870
                     long SRA reads, 8 Proteins, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     12 samples with support for all annotated introns"
                     /db_xref="GeneID:14009"
                     /db_xref="MGI:MGI:99254"
     CDS             107..1534
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /codon_start=1
                     /product="ETS translocation variant 1 isoform X3"
                     /protein_id="XP_006515029.1"
                     /db_xref="GeneID:14009"
                     /db_xref="MGI:MGI:99254"
                     /translation="MSTMSARGDGGQQQLHSKFVAGFICHIEKNESQRGRNCTEKPTN
                     VRKRKFINRDLAHDSEELFQDLSQLQETWLAEVAFHGLPLKIKKEPHSPCSELGSACS
                     QEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPD
                     RAFPAHLPPSQSIPDSTYPMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNI
                     PFPPQGFKQEYHDPVYEHTTMVGGAASQSFPPPLMIKQEPRDFAYDSEVPSCHSIYMR
                     QEGFLAHPSRTEGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQ
                     LWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLR
                     YYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSH
                     FDESMTYMPEGGCCNPHPYNEGYVY"
ORIGIN      
        1 ctgtagggcg actctgcttc tagaagccct atctacaaaa tgagcttacc tttgagtgat
       61 tcggataagg catagttttg ttttaagacc tcttcttctg gttaatatgt ccacgatgag
      121 tgcaagagga gacggagggc agcaacagct gcactcaaag tttgtggctg ggtttatctg
      181 ccacattgaa aagaacgaaa gtcagcgtgg gagaaactgt accgagaaac caacaaatgt
      241 caggaaaaga aaattcatta acagagatct ggctcatgat tcagaagaac tctttcaaga
      301 tctgagtcag ttacaagaaa catggcttgc tgaagtggct tttcatggcc tcccactgaa
      361 aatcaagaaa gaaccccaca gcccatgttc agaactcggg tctgcttgca gtcaagagca
      421 gccctttaaa ttcagctatg gagaaaagtg cctgtacaat gtcagtgcct atgatcagaa
      481 gccacaagtg ggaatgaggc cctccaatcc cccgacacca tccagcactc cagtgtcccc
      541 actacaccat gcatctccaa acacagctca tactccgaaa cctgaccggg ccttcccagc
      601 tcacctccct ccttctcagt ccataccaga cagcacctac cccatggacc acagatttcg
      661 ccgccagctt tctgaaccct gtaattcttt tcctcctttg ccgacaatgc caagggaagg
      721 gcgtcctatg taccaacgcc agatgtctga gccaaacatc cccttcccac cacaaggctt
      781 taagcaggag taccacgacc cagtctatga acataccacc atggttggcg gtgcagccag
      841 ccaaagcttc ccccctcctt tgatgatcaa acaggaaccc agagattttg catatgactc
      901 agaagtgcct agctgccact ccatttatat gaggcaagaa ggcttcctgg ctcatccaag
      961 cagaacagaa ggctgcatgt ttgagaaggg tcccaggcag ttctatgatg acacctgtgt
     1021 ggtcccggag aagttcgatg gggacattaa gcaagagcct ggaatgtacc gggaaggacc
     1081 cacgtaccag aggcgaggat ccctccagct ctggcagttt ttggtagctc ttctggatga
     1141 cccttcaaat tctcatttca ttgcctggac tggacgaggc atggaattta aactgattga
     1201 gcccgaagag gtggcccggc gttggggcat tcagaagaac aggccggcga tgaactatga
     1261 caaacttagt cgttctctcc gctattatta tgagaaggga atcatgcaaa aggtggctgg
     1321 agaaagatac gtgtacaaat ttgtgtgtga cccggaagcc cttttctcta tggcctttcc
     1381 ggataaccag cgcccactgc tgaagacgga catggaacgt cacatcaacg aagaggacac
     1441 agtgcctctg tctcactttg atgagagcat gacctacatg cccgaagggg gctgctgcaa
     1501 ccctcacccc tacaacgaag gatacgtgta ctaacatgag taacccgtca agcaaggcac
     1561 cccgtgcttc gcctcttttt ttttcaagat gcagagaatc accgaattct cttcgatgtt
     1621 tgttttattt ctgttgtttg tactttattt tttaaatgat aatacaaaag ggggcttttc
     1681 ctgttgcatt attctatggt ctgccatgga ctgcgcactt tatttgctgg tgggcgggag
     1741 taatctagac attcattctt tgtaacagga agatggcgga tgagtgggca gaaggagctg
     1801 agggattcct ttttgcttag gcttggaatg gagtcctaca ggttttctgt atgatgatgc
     1861 tatatcatat ttgttcgatt tcataataac gtaagataat tttccctggg tatctacggt
     1921 acagttgatt tcacgttgtg taaatatctt cttggagacc atttgccttg ggcatttccc
     1981 ccatcattac tgagtctctg caggtgtaca aaaatctact gtaaatggca gtttaatgtt
     2041 agaaattact gttttgcacc tcttgtaaaa aaaaaatatt tagcaattgc atttgttgtt
     2101 ctttctgttt cataatgctt tacagatgac ttgtagagga aaaccctaaa tgtgggcaat
     2161 tctctctgaa gttgagtaat caccatgact gtaaatgagg gccaccgttt tggactctgg
     2221 ctccaactga gtcacaggcc agtagcattt tatgtatctg gtgccatcct gctgttttgg
     2281 tactacaaat actgtctttt aaatatgttg atgcccatct cacttaaata atgacatgtc
     2341 atgatccttc ggaatcttca tttaagtgtt aaagctggga tcacaatgaa gcaaaaaata
     2401 gaaaaagaaa aaaaaattac ctgtctcctt tcactatctt cagtacataa atacattatt
     2461 taatcagtaa gaattaactg tactaaatca catatgatgc tgttctagtt acagcaagca
     2521 ctctttaaga aaaatatcca ctacactaaa taggtactat agtaattttt agacatggta
     2581 cccattgata tgcatttaaa tgtttcactg ctgtgttctg ttgataacat atataaatat
     2641 tagataatgc taatgcttcc gctgctgtcc tttctgtaat attctctcat gctgaattta
     2701 ttatgaccat ttataagcaa tgcagttaac tacagatagc atttcaggac aaaatagatg
     2761 actcaaacca tttatggctt aaaaaaatag cttaccacct tgctatgcta taagcagctt
     2821 ctatgcacat tgacaaacga agagtgagcc tcagcttgct aaaggaaact ggggaaactt
     2881 ttgtaacttt tggtgaaatg gaacattgtt tatgaactgt taaagaatat gaggaagttc
     2941 ctgtgtgaca tagtgctggc actgatgttg tccttcatct cctttggaca cacctgtaaa
     3001 tgtgatcaga ttgtacgaaa gacgattcaa agatctgaaa tctcaaagtt tctgccttgt
     3061 tttcattttg tttgctgttc gtttggttta ttgtccatcc gaaaatgaca gcattgagcg
     3121 tgtgccttgc tgtttcattc actctgaaaa ccataaggaa atggtgtcta aataccccct
     3181 gagtagctgc ttaccagatc caagcaaaga aaatgaattg tgttcacttc gttactactc
     3241 tggaagaaca gcttcataaa gagcctatag gaaaacacta tttcttagaa aaccattaaa
     3301 gaccaaataa acccagggaa gcagttcacc agcacaagaa agaacttgtg aagacgagcc
     3361 ctcagtatcc ttcccccacc ccccaaccct ctgcagatca cagttgtttc cgtaacataa
     3421 ctgtcccttc acttactctc cccatgcaca aatgggcact atccacatcc tccagaaata
     3481 ttctgatccc tgcagatgtc tataaatgat tccctcgact gtgctgcatg tgtttcttct
     3541 ggcccttcat gggctgataa gtatgcctta aaaatcagga cagccaccat gaccatgtgg
     3601 ctttttacag cacttggact ttctaagtaa ccagcgaagt atttattgga tagacaccca
     3661 agattgagct cttggtaaaa tagaaaaatt ctaagtgtgg attgacatgt aaatcatatt
     3721 caggagcctt ttctctgtct atagttcttc ccctatcctt ttaatattct tgtcctagtc
     3781 aatcagagag gaaaatttgg actctgactt actctaacgg atcaaaagag ggatggtatt
     3841 aattttgatg tataaggaaa actatatgtt ttattgcaat aggtagtgtt taaatggact
     3901 ctgtaaatcg tcagctagca ttaagtattt ctaatatgaa aaatttcaaa atataacacc
     3961 ataaagtgta gaaaaacaga ttttatgttc tgatttcttc cttttctttc tccttccttc
     4021 cttccttcct tccttccttc cttccttcct tccttccttc cttccttcct tcctccctcc
     4081 ctccctccct ccctccctcc ctccctccct ccctccctcc ctccctccct ctctctctct
     4141 ctttctttct ttctttcttt ctttctttct ttctttcttt ctttctttct ttttttagat
     4201 tgattaaaaa aatcaagttc ctgatgtttg caagagtctt gcattttgta tttcaacagc
     4261 attggctaca aagcatagga attagtaaag tagtcatttt tttcaacttg ataaaagaaa
     4321 tggaaagcta catctactag tgtttgatgt ctctagttga acatctgcat atatccaatc
     4381 atttctttaa acaaaggatg ttaccttcca aatatgtcat gagaaattat tttcttaagg
     4441 ggtacttcaa aagcaaaatc cacaaaactg agtatgtagt atttcttaaa accacagaag
     4501 acttgcttcc tgtagatgct ataacaaatt tctcagactt gagtaacaat acaaatgtcc
     4561 tgtcttacaa tcctggaggt caaaatttca aagtcagcct tagagggcta aaactaagat
     4621 gctaggaaca gcaactcatt ttgaaggctc cagagaagcc ttgttttttc cattttctga
     4681 ggctatataa caacatttca attttgcctc cctgtttatg cccctttctc tgcactcaca
     4741 gatctttcta gcttcctgca agaacacata ggatgatatt tagggtttac atagaaaacc
     4801 caggttgatc ttccccttct cagcctcctc acttatgctg tttgtacctt ttaacagata
     4861 aacaattcat aggttcttgg gttataatgt agctatgggg aagatctggg aaaggctatt
     4921 tattcagtct tattcagttt cccacatagc caaagacccc agagagcaaa atgctaattg
     4981 atttattcat ggaaaaaagt tctaagatta gtacatacta agggatattg tcatgtacca
     5041 ttcaaatttc cccttacttt gcataaatac ttttaaaaaa gtacctcagt ataaaaattc
     5101 tcctattcta gtaaaccatc tggattatca catcaaacct ttatatgatt taaatatccc
     5161 tcctctcctg gttaaacacg ttatggtagg aaaaatagct aacctgtgat aacagcaata
     5221 gcaccattaa atctgatgct cctgccatag tatgtttttg caaagaattt ctttaacatc
     5281 aatgagttca ttctctatga ttgtcagatc tgcaaatgat aactgcttat cagtaagaat
     5341 aataaacaga atatgctctt gttaattaaa ggaacaattc taaaaactga cttgatttct
     5401 ttttatactg aagtgaaaaa tatttcttga ctgatatcac agtgtttgca ccagattata
     5461 gggttccaaa ctgaatcatg tttttgattg tgcagccttt ccagattata taatgatgaa
     5521 acatattgga aaaaaattga atgcttagtt gagtccttaa ttttttttaa aaaaaatctg
     5581 acacaaataa gctattttcc aggtgcagtt tggcatggac aagagatatt aaaagtaggc
     5641 aaaaaatgga aagaatcaat ttaaagaagg cagatttgta tgttggacaa ttgcaacaag
     5701 aatttcatag aagtcaagtt ccataaaggt atttatgttg cattcagtac taaagacata
     5761 gataagtggt gcctaggagg atagagagag ggtggctgct tttgagttct ttggaaagct
     5821 gaccaaattt aatgagaact caactactct ttttaggact ttattttatt ttattttatt
     5881 aaatgaaact gacttagaca ctttaaaaaa tatggaaaag tctagtttaa gaagaaaaat
     5941 ctgattagat tagtgggtgc ctttataaaa atattgatgg ttttggaatg ctcaatgaaa
     6001 atgtatatac aatagctgtg gtttaagaat tcatatataa ggtaggtttt ctttccgctt
     6061 atgaactcca atattcttac ttagttccat ttgaaaatta tgttactatg ggaagatttt
     6121 ctttaagttt gcttggttgt attaaaatta taattatagt ttcagaaagc attatgaaat
     6181 tcatgtggtg atagcaaact aaatatggtc aaaatttaag tctaaaataa aagcccagaa
     6241 attgaaaata
//
