LOCUS       NM_001347379            4268 bp    mRNA    linear   ROD 18-MAR-2025
DEFINITION  Mus musculus ets variant 1 (Etv1), transcript variant 3, mRNA.
ACCESSION   NM_001347379 XM_006514967
VERSION     NM_001347379.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4268)
  AUTHORS   Lee,K.S., Loutit,A.J., de Thomas Wagner,D., Sanders,M., Prsa,M. and
            Huber,D.
  TITLE     Transformation of neural coding for vibrotactile stimuli along the
            ascending somatosensory pathway
  JOURNAL   Neuron 112 (19), 3343-3353 (2024)
   PUBMED   39111305
REFERENCE   2  (bases 1 to 4268)
  AUTHORS   Gomez-Del Arco,P., Isern,J., Jimenez-Carretero,D.,
            Lopez-Maderuelo,D., Pineiro-Sabaris,R., El Abdellaoui-Soussi,F.,
            Torroja,C., Vera-Pedrosa,M.L., Grima-Terren,M., Benguria,A.,
            Simon-Chica,A., Queiro-Palou,A., Dopazo,A., Sanchez-Cabo,F.,
            Jalife,J., de la Pompa,J.L., Filgueiras-Rama,D., Munoz-Canoves,P.
            and Redondo,J.M.
  TITLE     The G4 resolvase Dhx36 modulates cardiomyocyte differentiation and
            ventricular conduction system development
  JOURNAL   Nat Commun 15 (1), 8602 (2024)
   PUBMED   39366945
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4268)
  AUTHORS   Zhang,L., Nagel,M., Olson,W.P., Chesler,A.T. and O'Connor,D.H.
  TITLE     Trigeminal innervation and tactile responses in mouse tongue
  JOURNAL   Cell Rep 43 (9), 114665 (2024)
   PUBMED   39215998
REFERENCE   4  (bases 1 to 4268)
  AUTHORS   Lim,H., Zhang,Y., Peters,C., Straub,T., Mayer,J.L. and Klein,R.
  TITLE     Genetically- and spatially-defined basolateral amygdala neurons
            control food consumption and social interaction
  JOURNAL   Nat Commun 15 (1), 6868 (2024)
   PUBMED   39127719
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4268)
  AUTHORS   Zhou,B., Feng,C., Sun,S., Chen,X., Zhuansun,D., Wang,D., Yu,X.,
            Meng,X., Xiao,J., Wu,L., Wang,J., Wang,J., Chen,K., Li,Z., You,J.,
            Mao,H., Yang,S., Zhang,J., Jiao,C., Li,Z., Yu,D., Wu,X., Zhu,T.,
            Yang,J., Xiang,L., Liu,J., Chai,T., Shen,J., Mao,C.X., Hu,J.,
            Hao,X., Xiong,B., Zheng,S., Liu,Z. and Feng,J.
  TITLE     Identification of signaling pathways that specify a subset of
            migrating enteric neural crest cells at the wavefront in mouse
            embryos
  JOURNAL   Dev Cell 59 (13), 1689-1706 (2024)
   PUBMED   38636517
REFERENCE   6  (bases 1 to 4268)
  AUTHORS   Sussel,L., Marin,O., Kimura,S. and Rubenstein,J.L.
  TITLE     Loss of Nkx2.1 homeobox gene function results in a ventral to
            dorsal molecular respecification within the basal telencephalon:
            evidence for a transformation of the pallidum into the striatum
  JOURNAL   Development 126 (15), 3359-3370 (1999)
   PUBMED   10393115
REFERENCE   7  (bases 1 to 4268)
  AUTHORS   Chotteau-Lelievre,A., Desbiens,X., Pelczar,H., Defossez,P.A. and de
            Launoit,Y.
  TITLE     Differential expression patterns of the PEA3 group transcription
            factors through murine embryonic development
  JOURNAL   Oncogene 15 (8), 937-952 (1997)
   PUBMED   9285689
REFERENCE   8  (bases 1 to 4268)
  AUTHORS   Monte,D., Coutte,L., Baert,J.L., Angeli,I., Stehelin,D. and de
            Launoit,Y.
  TITLE     Molecular characterization of the ets-related human transcription
            factor ER81
  JOURNAL   Oncogene 11 (4), 771-779 (1995)
   PUBMED   7651741
REFERENCE   9  (bases 1 to 4268)
  AUTHORS   Jeon,I.S., Davis,J.N., Braun,B.S., Sublett,J.E., Roussel,M.F.,
            Denny,C.T. and Shapiro,D.N.
  TITLE     A variant Ewing's sarcoma translocation (7;22) fuses the EWS gene
            to the ETS gene ETV1
  JOURNAL   Oncogene 10 (6), 1229-1234 (1995)
   PUBMED   7700648
REFERENCE   10 (bases 1 to 4268)
  AUTHORS   Brown,T.A. and McKnight,S.L.
  TITLE     Specificities of protein-protein and protein-DNA interaction of
            GABP alpha and two newly defined ets-related proteins
  JOURNAL   Genes Dev 6 (12B), 2502-2512 (1992)
   PUBMED   1340465
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT009742.12, BB751428.1, AK035914.1, AK032224.1 and CD776508.1.
            
            On Nov 24, 2016 this sequence version replaced XM_006514967.2.
            
            Transcript Variant: This variant (3) lacks an alternate in-frame
            exon in the 5' coding region, compared to variant 1. The encoded
            isoform (c) has the same N- and C-termini, but is shorter than
            isoform a.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849381,
                              SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-304               CT009742.12        11437-11740         c
            305-608             BB751428.1         73-376
            609-1764            AK035914.1         878-2033
            1765-4241           AK032224.1         1305-3781
            4242-4268           CD776508.1         1-27                c
FEATURES             Location/Qualifiers
     source          1..4268
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 17.99 cM"
     gene            1..4268
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /note="ets variant 1"
                     /db_xref="GeneID:14009"
                     /db_xref="MGI:MGI:99254"
     exon            1..340
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            341..472
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     CDS             428..1807
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /note="isoform c is encoded by transcript variant 3;
                     ets-related protein 81; ets variant gene 1"
                     /codon_start=1
                     /product="ETS translocation variant 1 isoform c"
                     /protein_id="NP_001334308.1"
                     /db_xref="CCDS:CCDS83959.1"
                     /db_xref="GeneID:14009"
                     /db_xref="MGI:MGI:99254"
                     /translation="MDGFYDQQVPYVVTNSQRGRNCTEKPTNVRKRKFINRDLAHDSE
                     ELFQDLSQLQETWLAEVAFHGLPLKIKKEPHSPCSELGSACSQEQPFKFSYGEKCLYN
                     VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNTAHTPKPDRAFPAHLPPSQSIPDS
                     TYPMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVY
                     EHTTMVGGAASQSFPPPLMIKQEPRDFAYDSEVPSCHSIYMRQEGFLAHPSRTEGCMF
                     EKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVALLDDPSNSH
                     FIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERY
                     VYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMTYMPEGGCCNP
                     HPYNEGYVY"
     exon            473..560
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            561..608
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            609..738
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            739..927
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            928..1175
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            1176..1244
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            1245..1313
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            1314..1483
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            1484..1585
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     exon            1586..4253
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      3320
                     /gene="Etv1"
                     /gene_synonym="ER81; Etsrp81"
                     /note="major polyA site"
ORIGIN      
        1 agtagtttcc ctcggtggct tttcctgggt gcggaccctg cgacttctcc cagagtggtc
       61 gcaaaggcat aggggcgcag gagacccaag ggaaggggcc gaaagctgcc tgattgacag
      121 cccgaaatct gatcttgtga aagagacgtg gagccaatgg gaggcagcga tccatcagtt
      181 tggattggag gcccctggag gagaagtaga ggaaaaacca ccgaattcag ctctgtcaga
      241 ggcgctttcg gcttccaagg ggaagtgctg ggcaataatt aatgttttta ttaaatttgg
      301 agggaatttt ttgcagccgt tcgcctagcg tggccttcag gttgatagaa gtccagatcc
      361 cgaggaaatc tccagctaaa tgctcaaaat ataaaacact gagctaatat ttgcgaagag
      421 gagcagaatg gatggatttt atgaccagca agtgccttac gtggtcacca acagtcagcg
      481 tgggagaaac tgtaccgaga aaccaacaaa tgtcaggaaa agaaaattca ttaacagaga
      541 tctggctcat gattcagaag aactctttca agatctgagt cagttacaag aaacatggct
      601 tgctgaagtg gcttttcatg gcctcccact gaaaatcaag aaagaacccc acagcccatg
      661 ttcagaactc gggtctgctt gcagtcaaga gcagcccttt aaattcagct atggagaaaa
      721 gtgcctgtac aatgtcagtg cctatgatca gaagccacaa gtgggaatga ggccctccaa
      781 tcccccgaca ccatccagca ctccagtgtc cccactacac catgcatctc caaacacagc
      841 tcatactccg aaacctgacc gggccttccc agctcacctc cctccttctc agtccatacc
      901 agacagcacc taccccatgg accacagatt tcgccgccag ctttctgaac cctgtaattc
      961 ttttcctcct ttgccgacaa tgccaaggga agggcgtcct atgtaccaac gccagatgtc
     1021 tgagccaaac atccccttcc caccacaagg ctttaagcag gagtaccacg acccagtcta
     1081 tgaacatacc accatggttg gcggtgcagc cagccaaagc ttcccccctc ctttgatgat
     1141 caaacaggaa cccagagatt ttgcatatga ctcagaagtg cctagctgcc actccattta
     1201 tatgaggcaa gaaggcttcc tggctcatcc aagcagaaca gaaggctgca tgtttgagaa
     1261 gggtcccagg cagttctatg atgacacctg tgtggtcccg gagaagttcg atggggacat
     1321 taagcaagag cctggaatgt accgggaagg acccacgtac cagaggcgag gatccctcca
     1381 gctctggcag tttttggtag ctcttctgga tgacccttca aattctcatt tcattgcctg
     1441 gactggacga ggcatggaat ttaaactgat tgagcccgaa gaggtggccc ggcgttgggg
     1501 cattcagaag aacaggccgg cgatgaacta tgacaaactt agtcgttctc tccgctatta
     1561 ttatgagaag ggaatcatgc aaaaggtggc tggagaaaga tacgtgtaca aatttgtgtg
     1621 tgacccggaa gcccttttct ctatggcctt tccggataac cagcgcccac tgctgaagac
     1681 ggacatggaa cgtcacatca acgaagagga cacagtgcct ctgtctcact ttgatgagag
     1741 catgacctac atgcccgaag ggggctgctg caaccctcac ccctacaacg aaggatacgt
     1801 gtactaacat gagtaacccg tcaagcaagg caccccgtgc ttcgcctctt tttttttcaa
     1861 gatgcagaga atcaccgaat tctcttcgat gtttgtttta tttctgttgt ttgtacttta
     1921 ttttttaaat gataatacaa aagggggctt ttcctgttgc attattctat ggtctgccat
     1981 ggactgcgca ctttatttgc tggtgggcgg gagtaatcta gacattcatt ctttgtaaca
     2041 ggaagatggc ggatgagtgg gcagaaggag ctgagggatt cctttttgct taggcttgga
     2101 atggagtcct acaggttttc tgtatgatga tgctatatca tatttgttcg atttcataat
     2161 aacgtaagat aattttccct gggtatctac ggtacagttg atttcacgtt gtgtaaatat
     2221 cttcttggag accatttgcc ttgggcattt cccccatcat tactgagtct ctgcaggtgt
     2281 acaaaaatct actgtaaatg gcagtttaat gttagaaatt actgttttgc acctcttgta
     2341 aaaaaaaaat atttagcaat tgcatttgtt gttctttctg tttcataatg ctttacagat
     2401 gacttgtaga ggaaaaccct aaatgtgggc aattctctct gaagttgagt aatcaccatg
     2461 actgtaaatg agggccaccg ttttggactc tggctccaac tgagtcacag gccagtagca
     2521 ttttatgtat ctggtgccat cctgctgttt tggtactaca aatactgtct tttaaatatg
     2581 ttgatgccca tctcacttaa ataatgacat gtcatgatcc ttcggaatct tcatttaagt
     2641 gttaaagctg ggatcacaat gaagcaaaaa atagaaaaag aaaaaaaaat tacctgtctc
     2701 ctttcactat cttcagtaca taaatacatt atttaatcag taagaattaa ctgtactaaa
     2761 tcacatatga tgctgttcta gttacagcaa gcactcttta agaaaaatat ccactacact
     2821 aaataggtac tatagtaatt tttagacatg gtacccattg atatgcattt aaatgtttca
     2881 ctgctgtgtt ctgttgataa catatataaa tattagataa tgctaatgct tccgctgctg
     2941 tcctttctgt aatattctct catgctgaat ttattatgac catttataag caatgcagtt
     3001 aactacagat agcatttcag gacaaaatag atgactcaaa ccatttatgg cttaaaaaaa
     3061 tagcttacca ccttgctatg ctataagcag cttctatgca cattgacaaa cgaagagtga
     3121 gcctcagctt gctaaaggaa actggggaaa cttttgtaac ttttggtgaa atggaacatt
     3181 gtttatgaac tgttaaagaa tatgaggaag ttcctgtgtg acatagtgct ggcactgatg
     3241 ttgtccttca tctcctttgg acacacctgt aaatgtgatc agattgtacg aaagacgatt
     3301 caaagatctg aaatctcaaa gtttctgcct tgttttcatt ttgtttgctg ttcgtttggt
     3361 ttattgtcca tccgaaaatg acagcattga gcgtgtgcct tgctgtttca ttcactctga
     3421 aaaccataag gaaatggtgt ctaaataccc cctgagtagc tgcttaccag atccaagcaa
     3481 agaaaatgaa ttgtgttcac ttcgttacta ctctggaaga acagcttcat aaagagccta
     3541 taggaaaaca ctatttctta gaaaaccatt aaagaccaaa taaacccagg gaagcagttc
     3601 accagcacaa gaaagaactt gtgaagacga gccctcagta tccttccccc accccccaac
     3661 cctctgcaga tcacagttgt ttccgtaaca taactgtccc ttcacttact ctccccatgc
     3721 acaaatgggc actatccaca tcctccagaa atattctgat ccctgcagat gtctataaat
     3781 gattccctcg actgtgctgc atgtgtttct tctggccctt catgggctga taagtatgcc
     3841 ttaaaaatca ggacagccac catgaccatg tggcttttta cagcacttgg actttctaag
     3901 taaccagcga agtatttatt ggatagacac ccaagattga gctcttggta aaatagaaaa
     3961 attctaagtg tggattgaca tgtaaatcat attcaggagc cttttctctg tctatagttc
     4021 ttcccctatc cttttaatat tcttgtccta gtcaatcaga gaggaaaatt tggactctga
     4081 cttactctaa cggatcaaaa gagggatggt attaattttg atgtataagg aaaactatat
     4141 gttttattgc aataggtagt gtttaaatgg actctgtaaa tcgtcagcta gcattaagta
     4201 tttctaatat gaaaaatttc aaaatataac accataaagt gtagaaaaac agaaaaaaaa
     4261 aaaaaaaa
//
