LOCUS       NM_001123372            2061 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus ER membrane associated RNA degradation like 1
            (Ermardl1), mRNA.
ACCESSION   NM_001123372 XM_001477764
VERSION     NM_001123372.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (bases 1 to 2061)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
REFERENCE   4  (bases 1 to 2061)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   5  (bases 1 to 2061)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   6  (bases 1 to 2061)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   7  (bases 1 to 2061)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   8  (bases 1 to 2061)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   9  (bases 1 to 2061)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC182749.2 and BC052508.1.
            
            On Apr 18, 2008 this sequence version replaced XM_001477764.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849374,
                              SAMN00849375 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-432               AC182749.2         131489-131920
            433-601             AC182749.2         132522-132690
            602-741             AC182749.2         133279-133418
            742-843             AC182749.2         134597-134698
            844-933             AC182749.2         135321-135410
            934-1031            AC182749.2         137838-137935
            1032-1168           AC182749.2         138790-138926
            1169-2061           BC052508.1         166-1058
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 8.95 cM"
     gene            1..2061
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /note="ER membrane associated RNA degradation like 1"
                     /db_xref="GeneID:100041621"
                     /db_xref="MGI:MGI:3810125"
     exon            1..432
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     CDS             427..1743
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /codon_start=1
                     /product="uncharacterized protein LOC100041621"
                     /protein_id="NP_001116844.1"
                     /db_xref="CCDS:CCDS49962.1"
                     /db_xref="GeneID:100041621"
                     /db_xref="MGI:MGI:3810125"
                     /translation="MEILPGDSMTTCLSPLVHDLICNLGFELKEICDINSIVTQNGEV
                     RWKAITDRVRYEELGRSLDYRRSVQQLGPVCEAIHLHISALTRAQFEIQYSPWYQWTT
                     YPELFLEILDALQSSQPAAVSLGVMKLASCLERALGDVFLLVGKECPFLLRDLLASAE
                     LAQVFGHAVMDILKVFIGSPCGLNLRNVLWHGFASPQDIPPKYCSAMLLLTAGLGQLL
                     KSYLHHTKVTLAHRPFVTLTNLEDVIVFPGVTYEVLSALETVMTKSNFLLKIMLPYWE
                     MAVSKFKSHRFADCTMLLLSQLEAGLRRLFAAVNKCPDRLLTAESTILYTTFDEILAK
                     HMSDGSMNQLPCFLGEPAMEFLWDFLNYQEGPRIRDHLSHGEINICEFPEEAAGQLLT
                     FSLVLLLRFTEKGTVSELKVPQREGGGWLAECTTTSKGRACLISQI"
     exon            433..601
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            602..741
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            742..843
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            844..933
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1031
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1032..1168
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1169..1283
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1284..1386
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1416
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1485
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..2020
                     /gene="Ermardl1"
                     /gene_synonym="100041621; Gm3435"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcagccgt cctgggctcc gggcagacag ggaacaagct tcatctaaag ggtgggaagg
       61 ctgtcttggg cctccggtct ccactcactg actccttctc gaacatgcta ggcttccttt
      121 ctctcttaga caccggggat tgatgcgttt ggccggtggg cgtcttcgcc attcggcctc
      181 gccgctccat cttgatcggc tcaccgggac gcctccgccc tccgccctcc gccctccgcc
      241 gtgtaactgc ccaacggccc tgctcagatg ccgcggagca cagggctcgc gcctacgccg
      301 cgtgcagccg cgtcccggaa gccggggaag agaggcacgt gagtcatcag agggcgccgc
      361 atcccggaag ccgggaagga ggggcgcgtg agtaatcaga gagcgccgcg acccgagccg
      421 gaagcgatgg agattttacc aggggattcc atgaccacat gcctttctcc tttagtgcat
      481 gacttgattt gtaaccttgg gtttgaactc aaagaaattt gtgatatcaa tagcattgta
      541 actcaaaatg gtgaagtacg atggaaagca attactgacc gtgtgagata tgaagaatta
      601 gggcgaagtc tggactacag gagaagtgtg cagcagctgg gtccggtgtg tgaggccatc
      661 cacctacaca tctcagctct gaccagggct cagtttgaaa ttcagtattc gccttggtac
      721 cagtggacaa cttatccaga gttgtttctt gagatacttg atgccttgca aagctcgcag
      781 cctgctgccg tctccctcgg cgtgatgaaa ctagcttcct gtctggagcg agccctcggc
      841 gacgtatttt tactggttgg gaaagagtgc ccctttctcc taagagatct tcttgcatct
      901 gcagagcttg cacaagtctt tggacatgct gtgatggaca tactaaaagt cttcatcggg
      961 tctccctgcg gactcaacct gagaaacgtc ttgtggcatg gctttgcttc ccctcaagat
     1021 attcctccaa aatactgttc agccatgttg ctgttgacgg caggactggg ccagttactg
     1081 aagagttacc ttcaccacac aaaggtcacc ttggcacatc gaccttttgt aacactcaca
     1141 aacttagagg atgtgattgt ttttcctggt gtgacttatg aggtactgtc agcattagag
     1201 acagtgatga caaaatccaa cttcctatta aaaatcatgt tgccatattg ggaaatggca
     1261 gtgagcaagt tcaagtcgca caggtttgcc gactgcacca tgttgttgct gtcacagcta
     1321 gaagctggac tcaggagact gtttgctgca gttaacaagt gtcctgatag actgctcaca
     1381 gccgagtcaa caattctgta taccacgttt gatgaaatac tggcaaaaca catgagtgat
     1441 ggtagcatga accagcttcc ttgtttcctt ggagagcctg ccatggaatt cttgtgggat
     1501 ttcctgaact atcaggaggg tcctcgtatc cgggatcatt taagccatgg ggagatcaac
     1561 atatgtgaat ttccagaaga ggccgcaggc cagctgctca cattctccct ggtgctgctg
     1621 ctcagattca ctgagaaggg gacagtgtca gaactgaagg taccacagag ggagggagga
     1681 gggtggctgg cagaatgtac taccaccagc aagggaagag catgtcttat ttctcaaatt
     1741 tgatttatct taatttgagt tacaataccc tgtcagaata tatgcatgtg tacattctct
     1801 aaaagtctgg gttctgaagc tgaaataatt tgtctttgaa atgccttttt ggctctgttc
     1861 ttaatagcag tgtcagtgtt aaaaaccaaa gagtaagtta cgcaacatgg ttggccaagt
     1921 gtgggagacg cccacagtgc ctgctaaact gatggagcag gatagttata gttttgaaac
     1981 taatgatttt gttgttttaa agtaaatagc ttcagctgta aaaaaaaaaa aaaaaaaaaa
     2041 aaaaaaaaaa aaaaaaaaaa a
//
