LOCUS       NM_001081262            2195 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus glutamate rich 6 (Erich6), mRNA.
ACCESSION   NM_001081262 XM_619904
VERSION     NM_001081262.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC119873.38.
            
            On Feb 6, 2007 this sequence version replaced XM_619904.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849384, SAMN01164131
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-572               AC119873.38        114114-114685       c
            573-630             AC119873.38        113539-113596       c
            631-725             AC119873.38        108138-108232       c
            726-788             AC119873.38        107325-107387       c
            789-844             AC119873.38        106946-107001       c
            845-961             AC119873.38        106738-106854       c
            962-1072            AC119873.38        104054-104164       c
            1073-1230           AC119873.38        102476-102633       c
            1231-1329           AC119873.38        101766-101864       c
            1330-1420           AC119873.38        100648-100738       c
            1421-1536           AC119873.38        99841-99956         c
            1537-1692           AC119873.38        98657-98812         c
            1693-1921           AC119873.38        96180-96408         c
            1922-2195           AC119873.38        93778-94051         c
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 28.64 cM"
     gene            1..2195
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /note="glutamate rich 6"
                     /db_xref="GeneID:545527"
                     /db_xref="MGI:MGI:3588212"
     exon            1..572
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..2185
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /note="protein FAM194A; family with sequence similarity
                     194, member A"
                     /codon_start=1
                     /product="glutamate-rich protein 6"
                     /protein_id="NP_001074731.1"
                     /db_xref="CCDS:CCDS50914.1"
                     /db_xref="GeneID:545527"
                     /db_xref="MGI:MGI:3588212"
                     /translation="MRPRQGVRKPGKRNTKSKKPDKASKGKEMVEAEKAQKMQREQGE
                     ELEQEGQEEEVEEEEKEEEAKEEQGAQEEQEGQGAQGVQGWDDREGQPQESQNLFPES
                     LNEEDIWKAIGPSEGFDEDSPEFRPRLISVVSPSLSTMSPPSKVSSPSWGEEEPLPLP
                     HREGSPPASSSGSSHKSYPKIFQTFKKDLSEVTVDRDMYPSLYERVQMSVQTEDESWL
                     QRISAKKQIKRIPSIEITETLPQTQASMLRENWVINPEEPKLSILCEMEFNEDFVNLF
                     ETSLRTLPSVGPPAILSFRKEYSYMDVNFKDEQELEPTCEFCGSDLRSLFFKMDTSSE
                     NIQTKPKSYRCCCLQFQNLLDYINEEMLTIKPPALELISISPHAAYGSDIDRLKAKEK
                     ALQKKQERQMARHFAIISHDQSPTTTDDGKTFVTDALEIQKTYSQNSITQREAGNILK
                     YSFPCSAFPSWLNFTCEQSVCTDLIHTEMRCSVYFGFDASVDGTILLTYPSGNLAIIR
                     LPNKTDGFICIIQEDTPTNPTILALFDSSGRSSCYHPNGNVWVYINILGGQYSDQAGN
                     RIRTWNWSSTMPSSSFVSFKPVFLALNRYIGIRILEQDKVSINFLAMGQQATISLGTK
                     VMLHDPEEVPALWFLSGDDLLLLANLIKIRRLFNKLEGCMNFPISQAWEKLKQPPYLS
                     SLSLKLLALCHNSGIQQKTMETIIDLIKEEE"
     exon            573..630
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            631..725
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            726..788
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            789..844
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            845..961
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            962..1072
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1230
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1329
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..1420
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1536
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1537..1692
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1693..1921
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     exon            1922..2195
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2167..2172
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /note="hexamer: AATAAA"
     polyA_site      2195
                     /gene="Erich6"
                     /gene_synonym="4932431H17Rik; Fam194a"
                     /note="major polyA site"
ORIGIN      
        1 aacagctgct ccggggtcga gcgctccggg gctgcccaca aacatgcgcc cgcgtcaggg
       61 agtgcggaag cctggaaaga ggaacacaaa gtcaaaaaag ccagataaag cctcgaaggg
      121 aaaagagatg gtagaggcag agaaagcgca gaagatgcag agagagcagg gggaggagtt
      181 ggagcaggag ggacaggagg aggaggtgga ggaagaggaa aaggaggagg aggccaagga
      241 ggagcaggga gctcaggagg agcaggaggg gcagggagct cagggggtgc aagggtggga
      301 tgatagggag ggccagccgc aggaaagcca gaacctgttc cctgagtcgt tgaacgaaga
      361 agacatctgg aaagccatag gccccagtga aggctttgac gaagactcac cggaatttcg
      421 tccccgctta attagcgtgg tcagccccag cctgagcact atgtccccgc ccagcaaggt
      481 gtccagcccc tcgtggggcg aagaggagcc gctgccgctg ccgcacaggg agggctctcc
      541 tcctgcttcc agcagcggct cgtcccacaa aagctatccc aaaatatttc aaacatttaa
      601 aaaggacttg tctgaagtga ctgtagatag agacatgtat ccaagtttgt atgaaagagt
      661 tcagatgtca gtacaaacag aagatgaaag ttggcttcaa cgaatttctg ctaaaaagca
      721 gataaaaaga ataccatcta ttgagataac ggaaacactg ccacaaactc aagcttctat
      781 gttaagagaa aattgggtaa ttaatcctga agagcccaag ctaagcattt tatgtgagat
      841 ggagtttaat gaagactttg taaatttgtt tgaaacttct ctaaggacgt tacccagcgt
      901 tgggccaccg gccattctgt cctttaggaa agagtactcg tatatggatg tgaactttaa
      961 ggatgaacaa gagctggaac ccacgtgtga attttgtgga agtgatctac ggtcattgtt
     1021 ttttaagatg gacacttcct ctgaaaacat tcaaaccaaa ccaaaatcat ataggtgctg
     1081 ctgtcttcag tttcaaaatc ttcttgatta tatcaacgag gaaatgctaa ccatcaaacc
     1141 ccctgcgctg gagttaatca gcatctcacc tcatgcagcg tatggcagtg acattgacag
     1201 gctcaaggca aaggagaagg ctctgcagaa aaaacaagag cgtcagatgg ccagacattt
     1261 tgcgataata tcacatgatc agagccccac aacaactgat gatggtaaga cttttgtcac
     1321 ggatgccctg gaaattcaga aaacatactc tcagaattcc atcacccaga gagaagctgg
     1381 taacattttg aaatacagct tcccttgctc tgccttccca tcttggctta actttacctg
     1441 tgaacagtct gtgtgtacgg atctcattca caccgagatg cgatgttcag tgtactttgg
     1501 ttttgatgct agtgtggatg gcacgattct cttgacctat ccgtctggaa acctagccat
     1561 tatccgattg cccaacaaga cagatggttt tatttgtata atccaagaag acacgcccac
     1621 caaccctact atcctggcac tgtttgactc ctccggcaga agctcctgct atcaccccaa
     1681 tggaaatgtc tgggtataca tcaacatact gggaggccag tactcagatc aagccggcaa
     1741 caggatacga acttggaact ggtcaagtac catgccttcc tcatcctttg tctcatttaa
     1801 acctgtcttt ctggctttga accgttacat tggaattcgc atcctagaac aagacaaggt
     1861 ctccattaat tttctagcta tgggccaaca ggcaacaatc agccttggaa ccaaagtaat
     1921 gctccatgat ccagaggagg ttccagccct gtggttcctg agtggagacg accttctgct
     1981 gttggccaac ttaataaaga tccggcgatt gttcaataag ctggaaggat gcatgaattt
     2041 ccccataagt caggcttggg aaaagttaaa gcaacctccc tacctttctt cactctctct
     2101 aaaactactt gccctctgcc ataattctgg catacagcaa aaaacaatgg aaacaattat
     2161 agatctaata aaagaagagg agtaaggaag tgtca
//
