LOCUS       XM_030249315            6397 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus exosomal polycystin 1 interacting protein
            (Epcip), transcript variant X4, mRNA.
ACCESSION   XM_030249315
VERSION     XM_030249315.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030249315.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..6397
                     /gene="Epcip"
                     /gene_synonym="4931406G06Rik; 4932438H23Rik"
                     /note="exosomal polycystin 1 interacting protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 59 long SRA reads, 6 Proteins, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:74387"
                     /db_xref="MGI:MGI:1921637"
     CDS             164..856
                     /gene="Epcip"
                     /gene_synonym="4931406G06Rik; 4932438H23Rik"
                     /codon_start=1
                     /product="polycystin-1-interacting protein 1 isoform X1"
                     /protein_id="XP_030105175.1"
                     /db_xref="GeneID:74387"
                     /db_xref="MGI:MGI:1921637"
                     /translation="MDWLMREKQEHTSPCWTRMTSPSSFCLLLLQALGIVALGHFTKA
                     QNNTLIFTKGNTIRNCSCPVDIRDCDYSLANLICSCKSILPSAMEQTSYHGHLTIWFT
                     DISTLGHVLKFTLVQDLKLSLCGSSTFPTKYLAICGLQRLRIHTKARHPSRGQSLLIH
                     SRREGSSLYKGWQTCMFISFLDVALFNGDSSLKSYSIDNISSLASDFPDFSYFKTSPM
                     PSNRSYVVTVIY"
ORIGIN      
        1 aagccagggt gaaggcgcag tggccaggga agagctccaa ggtctgcaga ttggacaggc
       61 aaggccctgc cgtggggccg caaaatgtcg ctccagggga aaacttgaaa gtttctctca
      121 tcgtcagctt ctccgtgttc agaagaagga caggtgacct acaatggact ggctcatgag
      181 ggagaaacag gaacacacca gtccatgctg gacaagaatg acatcacctt ccagcttctg
      241 cctccttctg ctccaagcgc taggcatcgt tgcccttggc cacttcacaa aagctcagaa
      301 caacacactg attttcacaa aaggaaatac cattcgcaac tgcagctgcc cagtagacat
      361 cagggactgt gactacagtt tggctaactt gatatgcagc tgtaagtcta tcctgccttc
      421 tgccatggag caaaccagct atcatggcca tctgaccatc tggttcacag atatatccac
      481 attgggccac gtgctgaagt tcactctggt ccaagacttg aagctttccc tatgtggttc
      541 cagcaccttc cccaccaagt acctggctat ctgtgggctg cagaggcttc gcatccatac
      601 taaggccagg catccctccc gggggcagag tttgctcatc cacagcagaa gggaaggcag
      661 ttccttgtac aaaggctggc aaacatgtat gttcatctca ttcttagatg tggctctttt
      721 caacggggac tcatctttaa agtcatacag tattgacaac atttctagcc tcgccagtga
      781 ctttcctgac ttttcttact ttaaaacgtc cccaatgcca agcaacagaa gctatgttgt
      841 cacagttatt tactagcatc ctgtgtccct ccaccaggaa ctctaaaaaa gaaaagaaaa
      901 aaaaaagcat ttgaacagga atctgggaat aaggtcgtaa gacagttgtc cctgttcctt
      961 ctcttcgcct ccgtttacaa caaagccaca cctaagagca gccagctctc ggttccactt
     1021 tcaatgccaa gagcaatttg actcctgaac tttgtcccaa gggccagcta gaagccaggt
     1081 ctctgcaact ggtagcctgt ggagagctgt caggtgagaa ggggacagag tagtgcacac
     1141 cagggtctac ttcatggagc tcagtatagt catagcccca aggaagggac cttctttcag
     1201 aatgcagtta actcttcctt acctgtgtgg gtgcattcca agagcctgcg gacacctgaa
     1261 tgagtgaaca gtactaaccc tatgcatact gtattttccg atagagactt ttgacaaaat
     1321 ctaacttata aattaagatc actggggggt taaggaaaaa ctttaacata ctgtaagaaa
     1381 gtcgtgcaaa cacgctcgct cacaccatta cactgtgctc gcgcttcccg tgacgaccgc
     1441 tctctttggc ttagaaacat ttccagctct gctactttgt acatgatggc tattacggaa
     1501 taaaacacag ggttgctttg tttgttttgg tcagtctgac aacagagagc agtcactgag
     1561 gggctgctgg gtggcagtgt atttagggtt tctaggacag gcaagcaggc gactctgtcc
     1621 caggtagatc aggcaggagc ccactcttta ccctccccag aacagcttga agtttaaaac
     1681 ttctgattta tagatgaaac tgtatttcag ggaccacagt gaccctcttc tttcttttcc
     1741 ttttcatttt gtgacatggt ctggaattcc cattcaaaaa tgacacattt cttaagtttg
     1801 gggacctaaa ttcctctaga cggatatttt ccagatagtt atgaagaaca aatgcattga
     1861 gagactggag tttaaaagtg tgtttatgga cttgggaagg ttgtgtggga ccttaactct
     1921 cccggaaggt gtcagggttc caagagaggg gtgcacgaat gaagacattt gcccagactg
     1981 ttagcctcaa atttacacac acagcattgt tgtgtgggga agtccttttc tggtctctct
     2041 tcactttcac agagcagtca cagagcagac cacaaggctc tttggctctt ccctttcctc
     2101 tcctctgcat ctgtttaagc atctttgttc cctctatccc tgatcttatc acttgccctc
     2161 ccatcatccc tttccctctt gctcctgaat tcagaactta gattactgtc agtacaattg
     2221 ttaagcaccc gagggctagc tggggggaat ctaacaatca cgtcaaactt ggtgctcaaa
     2281 ctacaaagaa ttaattttaa aatgaaaatc tggcccttat tccatctggg attttaaaat
     2341 gagaaagtta cttcatggag gtagttaaca caaaattgta ttatacgtac tgataagagg
     2401 aaccacagca attactaaat tgttcaccat tacataaaga aaagttcccc tgtaataaag
     2461 accagattta ccattcccat gcattctttt taaagcccgt gtgaggagga gggagaggga
     2521 ggaggaggga gagatggctc agagctggaa agcagggtgc tgctccttcc gagccctgag
     2581 ttcctcaccc agcgccctca ctggctccct cacagccatc tgtagctcca gtgcagatcc
     2641 aagcctcctg gaggctctct tctggccttc acagggactt gtacgtacgt ggcatacaca
     2701 ccataaacga atatgaataa aacccaaagc taaatgtaaa cccaagcctg ctgtgacaca
     2761 aatgtctaag cttagacaaa gttgaaacgt tgctgattca agataccacg atggaaaata
     2821 ataattttat tgtaaaagca caggttagtc acgtcatatt tttatcttga ccttaacatt
     2881 actgcattag cataactggc aggggatttg gtcattctgg ctaattaact cgggtctaca
     2941 gtgccagcat ttaaattagg ccaaaacgaa gtccaaactg tgaattttaa tagaaaatgt
     3001 aatggcctca ttactgatat agttcagagg ttaaagtgag aaaaagacaa ggagttgggg
     3061 ggaaagagaa agcaagaaag atgtaaatca aaagataaac tgcatgtatt aatcatcatt
     3121 ctgcatatat cacaaactgg attttgatgg aaactgattc atgtttttaa agagtggggt
     3181 tagaaattct ctgtgcctgt aagtaacttc cacccagtaa ctagctggta ctggttcaag
     3241 agctatgcac atctggttta tgtgattcta ggataaattg tagagggctg tctggcctgg
     3301 ggccagcagt gtgtcacctg gggccagctg gtaaaagtag gcatcatttc aaagaggagg
     3361 aggaagacat agatctttgt cacacccata aggtggcata taaagattgt gaagcacaca
     3421 atttatgaat aacaattata aacattatcc tttactaagt tctgtacaat tctcaaataa
     3481 tgtttcgtta gatttttgcc aagttcttgt atctaaaggt tggaatgctg agaaaataag
     3541 gctctcatat aaacagtctg atgctctcat tatgttaggg atacatgtag cgttaagatg
     3601 caaatatact tagaaatgtc acttgttggt caatgatata aatacttttt acagaattaa
     3661 gtaatatttt caaatactat aggaatttcc ttaatttggg atactatttg caatgtaaag
     3721 gttatagata tgacacattt tataagttaa tatgtgtttc tctatcatat ccaacaaaat
     3781 aaaaaatatg actgctatat acagctcttt atagttttag tgatgccaat actgtgacta
     3841 tgattagttt caaactatta agagaacaga gctgagaaaa gacacagtat actgagagta
     3901 cagctcaaca ggaaagagct tacccaccca gcatacacgt gtgcctgatt aaaatcccag
     3961 cccagcatac atatacgtag cacactccct tctagatgca agagtcgcac aggacttcaa
     4021 gagcatgagt aaacgtgtaa gagagtaaga caactgcaaa accatgaact ctgctgtgag
     4081 agtgacctcg gtcctctccc aggacaatca caacaaggga acaggcaaga agagggcaga
     4141 catagaatgc tgggttcact ggaggtgagg caggtgggct ggacacgtgg gatgctgtac
     4201 tatctaccag ggacaggact tggtaactcc caggagcttg ggttagggtc tgagcacagc
     4261 ggtcaggcag gtggctgagg gagtgtggtg aggagtggtt taggcaaccg aggatgcgag
     4321 gaggtccgac tggagtagtg atggggctga gggtaaatga gagaatgcga aggatggcac
     4381 tagaaaatgc acccacaccg cagctacagt tatagataag ccgtgttgtt ccgaatctcc
     4441 tcagtgttca aagtgcaggc aatgtcttct gtgagaaaag gatacttaga agtccactta
     4501 cagaggtgat aaatacaaag ctccgcctta ttcttctctc tgtaatcatg ctgaaatatt
     4561 gctgcatagc tttgctggct cctggtaaaa ctcaaaatat acatacacaa aagaaacatt
     4621 aattcttttg tgttttatat ctatagggga tgtttatgac ctcattgtct taaaaagttc
     4681 tgagctttaa aattctcccc tggggggaaa tcatgtacag atgacagtaa tagaacacag
     4741 accatagtgt ggtgctttta agaaaggaca caatggtaat ttggcttttg cactggtcat
     4801 atatgtattt aaagtataaa ctgtgagtta gattatatcc catatattta ggtcatactt
     4861 catgtaatct cagtgccaag gaactctggc tttgagcaca ctctgtgtag cgggcagagg
     4921 gcagagactg agctggacaa agcgcccgca gcagctcctt tcctacagct gctgcaggcg
     4981 acgtttactg taggagctga cattccggag ctattgttaa ttgtcttgca ggatgatgtc
     5041 ctgtcttcat tctgaaaatc cttacacatt ttataacaat aaagacactt actgcccatt
     5101 ggtacatgtg ctaatttaaa aataatgata aaaaaaaacc ctctagatct ttagtctggg
     5161 tcaggtcact attaatggct ccatgaggaa agtattattt cactgaatta gaatcaggag
     5221 ctaaattttg gtagaggttg aaacaagtaa tttcaatttg agagggagtg gtattagaac
     5281 cccatgcaca ctaatcacac accttgcttt tgggccccat agtagataga cctaggagtt
     5341 tctaaatttc cttagttagg acattagcac attcctccag tcatgtgcta tggatggagg
     5401 tactcctctc tactcatacg ctaattgcag taactgcata tctcagagca ttttcacccg
     5461 agaaaaaggt gtatctgaaa cattattcag ctagtaaact tttagaagat tgatttaatt
     5521 gaagagatta aaaaaattaa tataagaata taaagactaa cttattctag actgtggtgg
     5581 ttgtgaggtt ggtgtgttta ttgctgtctg ggttcaggct ctcactactc agtcctgact
     5641 ggcctagaac ttatgatgta gaccagactg gtctggaact caagagatcc acctgcatca
     5701 gcttggcttc taagtttttt aaaatttgat acattctaag taagttcaca caacaaaata
     5761 aaatgtcaac aacaacaaca ttaaagggga aatgataagg gctccagggc acctacaaac
     5821 atccatccaa ctccagggag tcctgagaag agggcctgtc ggtctctcct gagctcctgc
     5881 acccaacctg ttcctcctcg catgctacac tggctagttt tcctggttta tacgtttcca
     5941 tggtgcatta gtcagggttc tagagccaca gaacttatgg aatggatctc tgtatctatg
     6001 taaaggggag ttattagaat ggcttacagg ccgcagtcca gctgatccaa caatgactag
     6061 ctgtgaggga aagaatctag cagttgctca gtcccataag gctgcatatc tcagctggtc
     6121 ttctgcataa gctggactcc tgaagaagaa gaagcctcta atgccagtgg agggaagatg
     6181 cgctaataag cagggggcaa agagcaggca aagagcaaag ctgcttcttc catgtgcttg
     6241 tagagacttc cagcagaagg cctgtcttcc tgctgcaaga tctggatcac aggcactgag
     6301 tgggagggag gctgccacac gtaacggctc cgtataagcg cggaagacgc attgcagcaa
     6361 cacgctccga gacgacagac tacactcgct cctctca
//
