LOCUS       XM_006526657             967 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus empty spiracles homeobox 2 (Emx2),
            transcript variant X1, mRNA.
ACCESSION   XM_006526657
VERSION     XM_006526657.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006526657.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..967
                     /gene="Emx2"
                     /gene_synonym="Pdo"
                     /note="empty spiracles homeobox 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 20 long SRA reads, 1 Protein, and 95% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:13797"
                     /db_xref="MGI:MGI:95388"
     CDS             455..967
                     /gene="Emx2"
                     /gene_synonym="Pdo"
                     /codon_start=1
                     /product="homeobox protein EMX2 isoform X1"
                     /protein_id="XP_006526720.1"
                     /db_xref="GeneID:13797"
                     /db_xref="MGI:MGI:95388"
                     /translation="MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPI
                     NPFLNGFHSAAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPS
                     SHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGKSMVSEPENEIQKAKARGRRLRF
                     STEEKRDTPH"
ORIGIN      
        1 ctagtgaaga agcgaacact tccatggatt gtccttggac ttagggcgcc ctgcccgcct
       61 tttgcaaagg agagaaaact ttttttttgc ctccccgaaa accccctccc tgcctctaac
      121 tccaatctcc ccccccccca cgccacctcg ctcaaaaaaa tattacccca atccacgcct
      181 gcaaattctt ctggaaggat tttcccccct ctctccaggt tgggcgcgtt tggtgcaaga
      241 ttctcgggat cttcggcttt gcctctcctc cccctccccc tcctttcctt tttcctttcc
      301 tttcttcctt ccttcctttc cttaccccca cccccacccc aaacaaacga gtcccccatt
      361 ctcctcggtc ctcgccgcgg gcagcgggcg gcggaggcag cgcgccgcgg tcgccgggag
      421 cagggagccc agcgcgcccg ctcctcggcg cagcatgttt cagccggcgc ccaagcgctg
      481 cttcaccatc gagtcgctgg tggccaagga cagtcccctg cctgcctcgc gctccgagga
      541 tcccatccgt cccgcggcac tcagctacgc caattccagt cccataaatc cgttcctcaa
      601 cggcttccac tcggccgccg ccgccgccgc cgccggcagg ggcgtctact ccaacccgga
      661 cttggtgttc gccgaggcgg tctcgcaccc gcccaacccc gccgtgccgg tgcacccggt
      721 gccgccgccg cacgccctgg ccgcccaccc cctgccctcc tcgcattcgc cacaccccct
      781 cttcgcctcg cagcagcggg acccgtccac cttctacccc tggctcatcc accgctaccg
      841 atatctgggt catcgcttcc aaggtaaaag tatggtttca gaaccggaga acgaaattca
      901 aaaggcaaaa gctagaggaa gaaggctcag attctcaaca gaagaaaaaa gggacacacc
      961 acattaa
//
