LOCUS       XM_030242482            8549 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus EMSY, BRCA2-interacting transcriptional
            repressor (Emsy), transcript variant X15, mRNA.
ACCESSION   XM_030242482
VERSION     XM_030242482.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242482.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8549
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..8549
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /note="EMSY, BRCA2-interacting transcriptional repressor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 mRNAs, 30 ESTs, 586 long SRA reads, 1
                     Protein, and 93% coverage of the annotated genomic feature
                     by RNAseq alignments, including 42 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
     CDS             3139..6783
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /codon_start=1
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X15"
                     /protein_id="XP_030098342.1"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
                     /translation="MPVVWPTLLDLSRDECKRILRKLELEAYAGVISALRAQGDLTKE
                     KKDLLGELSKVLSISTERHRAEVRRAVNDERLTTIAHNMSGPNSSSEWSIEGRRLVPL
                     MPRLVPQTAFTVTANAVANAAVQHNASLPVPAETASKDGVSCSDEDEKPRKRRRTNSS
                     SSSPVVLKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKITFTKPST
                     QTTNTTTQKVIIVTTSPSSTFVPNILSKSHNYAAVTKLVPTSVIASTTQKPPVVITAS
                     QASLVTSSSNGNSSSTSSPISSTVAVTTVVSSTPSVVMSTVAQGVSTSAIKVASTRLP
                     SPKSLVSGPTQILAQFPKQHQQSPKQQLQQVQQQTQQPVAQPSSVSQQQQPQQSALPP
                     GIKPTIQIKQESGTQATYTRPTVSPSLGRVATTPGAATYVKTTSGSIITVVPKSLATL
                     GGKIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGG
                     EKTLQTVPAGAKPAIITATRPITKMIVTQPKGIGSAVQPAAKIIPTKIVYGQQGKTQV
                     LIKPKPVTFQATVVSEQTRQLVTETLQQASRVADASNSSAQEGKEEPQGYTDSSSSST
                     ESSQSSQDSQPVVHVIASRRQDWSEHEIAMETSPTIIYQDVSSESQSATSTIKALLEL
                     QQTTVKEKLESKPRQPTIDLSQMAVPIQMTQEKRHSPESPSIAVVESELVAEYITTER
                     TDEGTEVAFPLLVSHRSQPQQPSQPQRTLLQHVAQSQTATQTSVVVKSIPASSPGAIT
                     HIMQQALSSHTAFTKHSEELGTEEGEVEEMDTLDPQTGLFYRSALTQSQSTKQQKLSQ
                     PQLEQTQLQVKTLQCFQTKQKQTIHLQADQLQHKLTQMPQLSIRHQKLNPLQQEQAQP
                     KPDAQHTQHTVVAKDRQLPTLMAQPPQTVVQVLAVKTTQQLPKLQQAPNQPKIYVQPQ
                     TPQSQMALPSSEKQPASQVEQPIITQGSSVTKITFEGRQPPTVTKITGGSSVPKLTSP
                     VTSISPIQASEKTAVSDILQMSLMEAQIDTNVEHMVVDPPKKALATNVLTGEAGALPS
                     THVVVAGMTKCRESCSSPSAVGPPLTTRKIEAAGVPTTGQFMRIQNVGQKKAEESPTE
                     IIIQAIPQYAIPCHSSSNVVVEPSGLLELNNFTSQQLDDDETAMEQDIDSSTEDGTEP
                     SPSQSAVERS"
ORIGIN      
        1 ttttcttttt ctatttaaca gggtaaatgt gggaataggg gctggtgaga taactcagtg
       61 attaagagca ctgactgctc ttctggaggt catgagttca aatcccagca accacatggt
      121 ggctcataac cattcgtaat gagaaacaaa ttaaaacaaa caaacaaaca aacaaacaaa
      181 cataaaacag cctatgggtt ggagcaagca gggctggagc aagagggaga agggaagggg
      241 ggaaaggaaa aaaaaaagta taaattactt gtttaaaaaa aaagtgtgga aatagacatg
      301 ggactggtag ggctaggtaa gttttatgcg atgtaaggga gagctgtagt tttgagtctg
      361 atgcttaaga gaggacagta gggattttgg ttcatacctg taatcctcag gagggtctca
      421 agtttgaggc ttgcctagga tacatggtaa gaccttgact ccaaacaaca acaaacaaaa
      481 accaagtaat gaaaatggct aggagagggc tggcaagatg gctcagtggt taagagcgct
      541 gactgctctt ccaaaggtcc acttacatat aataaataaa taaattcttt aaaaagaaaa
      601 cggctaagag aaagggaagg tgtaaagtgg tatgtagtgt cagcagcatt gagacttggg
      661 agcttcttag aaacaggatc tggccctatc cccaaactac gaaattcaaa acttgcattt
      721 taccaggacc taccttcatg tgttcctgct aacattaaat cttgagaggt actactggct
      781 gaaggtagac tctaggacca agctgcctat atataacagg tagagttttc tcattgtgtg
      841 tgtgtgtgtg tgtgtgtacg ttggagatca gaggaaactt ctgtgaagcc agttctccca
      901 ctatcactgg aggattgaat tcaggtcatc aggcttgcaa gacagacaca caacacttgt
      961 tgaaccttct cgtcaacccc aggctgccaa aacttaaatt cttgttttat caatctactt
     1021 atgtgggacc ttagggatgc tttttaaccc gtaccaagga cctattatgt aagagatgga
     1081 gggtcaactc taataatctg tcacttattt ttgacttact gtaaaagttt ttgttgtctt
     1141 aaaagattta ctttcggtgt ctgggtattt tgcctgcgtg gatatctgta tactacatgt
     1201 gtccagtgcc taaggtactc ctgtaactga attaatggtt gtgagccata tgggtgctgg
     1261 gaatagaacc cagcttctct ggaagagagg ccagtgctct taagcactga gccatttctc
     1321 cagctcttta gagacagggc tctactatgt gaaccctctc agttcaccag ttcctgaaca
     1381 actgtgcttt cccatttata gagtggtgaa gcttaattac gcctgtctca cggagatgct
     1441 gcaagagtca aatcatagaa tgtctgttaa attacaaaac ctcctattaa aacttaattt
     1501 accagtgagg tggtggtggt gtacaccttt gattcctgtc tcgagaagac ttaatttact
     1561 accttgcaag gtattcttaa gaaactgacc tcaaaatagg gtgcaataag aaggccagga
     1621 gagctgtata ggaaatggtc ctttttattt ctgactaacc tacagctcca ttcaggagca
     1681 ggagtagact catatgcagt ggttcacaat ttacttaaaa acttcttctt ttttcttgtt
     1741 ttggtctcgg tgtctcttgc agtccagtct gaccctgcat tcctcatctt cttccacttc
     1801 tacagtgctg agattataaa tgtaattcat aatgaactag gaaaagaact ttcattcacg
     1861 ttgtgtatct taatattccc acagggtagt ttttctcgtg tgtccatcct aacatccctt
     1921 agtgctagga atccgattca ggtctccagg tcttgcacat acttgacaag caatctgcca
     1981 ttgagctaga tgtcctccca gtggttaccc tagttttcac gggaatctgc taacagaagg
     2041 atgcacacta acaattcctc aagatttgca ctttcattgc atccgatgct accagagttc
     2101 tttatttaga gggaggacac aacaaaattc gatgggattt ataatactag aaattaactt
     2161 tgagttcttg gatcagagaa acaatatatt gggtccctat cgatctgtaa aataggggca
     2221 caaggcctcc acaacattgt gtggttaaga acaaaggctg atggtgaacc taccatgtcg
     2281 tagtgcctca agtaagtccc ttcttccctt tgtcagattt tgcacgagat atcactacct
     2341 ctcctacttc gtacatggcg taactccaag ctgagaccgc tcggattcct ttcctccact
     2401 tgcaactcct aacaccgaga aaggtgtacg ggccactgtg aggtcttctc tctccgtagt
     2461 ggataacctt tcttgagttg tcgtttgggt ggctggaaga cgctgatgac tactcccaag
     2521 cgtctacgga accagatctt aatcctcaac tgggcatcag ggaccaagct gtgttctttt
     2581 catcccaacc ctcgctagag tgaaaaggtc gaagctcagc tccaattaca gacgccatct
     2641 tgaccgctac gtgtgacgcc acacgtacag ccgaaagagc agctgattgg ctgggaaaga
     2701 ccggaggata ggcgcgcgaa gctggagact ggagggtaat gtagaagccg aaaggaacta
     2761 cactcccaga cttccttgcg catgtgacca gcaagcagca agagaaagag gagcgaggtt
     2821 ggactcggac tacaactccc actaggaccc gcgttgtccg ccctttcctt tcaaaaggca
     2881 gaggaaaagg gacaggaaga atggaggctt ttgagtgctc gtttctcaaa aggcgggaaa
     2941 ggcgaactac acctcccggc gagccgcgcg cgcctgcgcc tgcgctctgg tatctgtcgc
     3001 catcttgccc cttctgaggc accgcaaaca aacctaattc ctggtgtccc ctagtcttgg
     3061 cggaggagcc ttttagatga gccccgaaag gccgggcagg gaggacaagc tctttggggc
     3121 taccagacag aagcagcaat gcctgttgtg tggccaaccc ttttggatct cagcagggat
     3181 gaatgcaaac ggattcttcg aaaattggaa ctggaggcat atgctggagt tatcagtgca
     3241 cttcgggcac aaggggacct caccaaggaa aagaaagatc ttcttggaga gctctcaaaa
     3301 gtccttagca tctcaacaga gcgccaccgt gctgaagttc ggagagcagt aaacgatgaa
     3361 cggttaacaa caattgcaca taatatgtct ggacctaata gttcttcaga gtggtccatc
     3421 gaaggacgta gattggtacc tctgatgccc aggctggttc cccagactgc cttcactgta
     3481 acagcgaatg ctgtggccaa tgcagctgtc cagcacaatg cgtcccttcc tgtgcctgca
     3541 gagacagcaa gcaaagacgg cgttagctgc tcagatgaag atgaaaaacc cagaaaacgc
     3601 aggcgaacaa actcctctag ctcctcccct gttgtcctca aggaagttcc aaaggctgtt
     3661 gttccggtct caaagacgat cactgtgcct gtgagtggaa gtcccaagat gagcaacatt
     3721 atgcagagca ttgccaactc cttaccaccc catatgtcac ctgtgaaaat aacgtttacc
     3781 aaaccatcaa cacagacaac aaacacaaca acacagaagg ttattatagt gaccacatca
     3841 ccaagttcaa cctttgtgcc caacattctc tccaaatctc ataactatgc agcagtcact
     3901 aagcttgtac caacatcagt cattgcctcc acgactcaga agccacctgt tgttataact
     3961 gcgtcccagg cctctctggt caccagtagc agcaatggca acagcagttc tacgtcatca
     4021 cctatttcta gtacagttgc agtaacaacg gtggtatctt ccacaccgtc cgtggtcatg
     4081 tcaacagtag cacaaggtgt atccacatca gcaatcaaag tggcatcgac aagacttcct
     4141 tcccccaaaa gcttagtgag tggccctacc cagattcttg cacagtttcc taaacagcat
     4201 cagcagtctc ctaagcagca gttacagcaa gtacaacaac agacacagca gccagtggcc
     4261 cagccttctt cagtgtctca gcagcagcag cctcagcagt cagcattgcc gcctggtatc
     4321 aaacctacca tccagatcaa acaggagtca ggtactcagg caacctatac ccggccaaca
     4381 gtgagcccat ccttaggtcg tgtggctaca acccctggag ctgcaaccta tgtgaaaact
     4441 accagtggca gcatcatcac tgtagtaccc aaatcattag ctaccttggg aggcaagata
     4501 attagcagta atattgtttc tggaacgact accaaaatca ctacaatccc aatgacttcc
     4561 aagcccaatg tgattgttgt acaaaagact acaggaaaag gaacgaccat tcaaggcctc
     4621 cctggcaaaa acgttgtcac aaccttgcta aatgctggag gagaaaagac tcttcagaca
     4681 gtgccagctg gagccaagcc agctataatt actgctacaa gacccatcac caaaatgatt
     4741 gtaacacagc ccaaaggaat aggttccgca gtacagccag cagctaaaat cattccaaca
     4801 aaaattgtgt atggacaaca agggaaaaca caggttctaa ttaaacccaa accagtgaca
     4861 tttcaagcta cagttgtcag tgaacaaaca aggcagctgg taacagaaac attacagcaa
     4921 gcatccaggg tagcagatgc cagtaattca tctgctcagg aaggaaaaga ggagccacag
     4981 ggttacacag acagtagttc ttcttccaca gagtcctccc agagttctca agattcccag
     5041 cctgtagttc atgtaattgc ttcccggcgt caggattggt cagaacatga gattgcaatg
     5101 gagactagcc ccaccataat atatcaggat gtatccagtg aatcacaatc agccacttca
     5161 acaatcaaag ctctgttaga actccaacag acaacagtaa aggaaaaatt ggaatctaaa
     5221 ccaagacaac ccactattga cttgagtcaa atggcagtac ctattcagat gacccaggaa
     5281 aagagacatt ctcctgagag tccatccatt gctgtggtag agtcagaact agttgctgaa
     5341 tacatcacca cggaacgcac tgatgagggg acagaggttg cttttcccct tctagtcagc
     5401 catcgctccc agccccaaca gccttcccag ccccagcgga ccctgcttca acatgtggct
     5461 cagtcacaga ctgcgacgca gacttcggtg gtagtaaagt ccatcccagc gtcttcccct
     5521 ggagcaatca cccacatcat gcagcaggca ttaagcagtc acaccgcttt tacgaaacac
     5581 agtgaggaac ttggaactga ggagggtgag gttgaagaga tggacacatt ggatcctcag
     5641 acaggtctgt tttaccgctc tgccctgaca caatcgcagt caaccaaaca gcagaaactt
     5701 agccagcccc agctggaaca gactcagctg caagtgaaaa ctctgcagtg cttccagacc
     5761 aaacagaagc agaccatcca cctgcaggca gaccaactcc agcacaaact cacacagatg
     5821 ccccagctct ctatcaggca tcagaaactg aatcctctcc agcaggaaca agcacagccc
     5881 aagccagatg cacagcacac acagcatact gtggtggcca aagacaggca gcttcctacc
     5941 ttaatggcac agcccccgca aactgtagta caggtgcttg ccgtgaaaac cacacagcag
     6001 cttcctaaac tgcagcaagc tccgaaccaa ccaaaaatct acgtgcaacc ccaaactcct
     6061 cagagccaga tggcactccc ctcttcagag aaacagcctg caagccaggt ggagcagcca
     6121 attataactc aaggatcctc tgttacaaag ataacatttg aggggcgcca gcctcccaca
     6181 gttacaaaga taactggtgg cagttctgtt cctaagctga catcaccagt tacaagcata
     6241 tctcccattc aggcctctga gaagacagca gtgtcagaca ttttgcaaat gtctttgatg
     6301 gaagctcaga ttgatacaaa tgtagaacat atggtagtgg atcccccaaa gaaggctcta
     6361 gccaccaatg tgctcactgg tgaggcagga gctctaccct ccacccatgt ggtggtggca
     6421 gggatgacga aatgtagaga gtcctgttca agtccatctg ctgttggccc tcccctaacg
     6481 accagaaaaa tcgaagcagc aggagtgcct acgacaggcc agttcatgcg tattcagaat
     6541 gtaggccaaa agaaagctga agagagccca acagaaatta tcatccaggc cattccccag
     6601 tatgctattc cttgtcactc cagctccaat gtggtggtgg agcccagtgg gcttctagag
     6661 ttgaacaact tcaccagtca gcagctagat gacgacgaga cagccatgga gcaggacata
     6721 gacagcagca cggaggacgg gactgagccc agcccctctc agagcgctgt agaacggtcc
     6781 tagtgtgcag acgccggagt gcactttaga gcctgcgtgg ttaccaaatg tccagggaaa
     6841 cttaaaattt gttatagtaa aaaagaaaaa aaaaaaaaag aaagaaagaa aaaagcactt
     6901 tgctcatatt taggctgggg acctagaagc attttaacaa aattaaactc acagaggaat
     6961 gtactttaaa aaaaaaaaat agaaaaagaa aaaaaaaaaa gcagaggaaa cgatgcaccc
     7021 catggagccc ggcaccttgt tggtgctaag cagcgagaag agactttcct gtgagtggtc
     7081 ctcgactgct ttccactgag caaataccac cagagagtat gaaaaggaaa agaaaggaga
     7141 atatgaagag tttgtatttt tgaaatgatg tatctgaaca gtttttcaaa aattgtgttt
     7201 gtttttgcaa atccctggag atgttgattt ggctagcatt ttacatttgc tcagttcatg
     7261 attagtttat gaatacctag ggaagtcctg gcattggagt ccttgctgga cggtagacat
     7321 cagtcaggtt gctgcctggg cagtttgggg tggcttgtac atgtgctcct tggttgtata
     7381 ctaatttatt gtggagttcc acacttgcct atttatttaa tgtaaatgtt ttgaagcagg
     7441 ccgaatccct tttcctacat gtcctgggaa gctggatccc tggccttccc accttcccac
     7501 cccctcaccc ccctttaaga agacggatta gagaagattt ggtccggaag cagaggaaaa
     7561 gacatttcta gcccaaagga aatgctcagt ggtgttcctg aaaatgagct ctgctcattg
     7621 gatgctttct cgacaccgac gttgcacacc cgtgttggac tgagactttg aaaacaactt
     7681 tgacttactt tggtttaaat cctttgaaat gtatgaaaat gttcacttac agttctaaat
     7741 gtaatgtttt taagttttta attttttagg gtgcagtttg tttacgtgca ggtgtggtct
     7801 tgtgattgct gtctatcaca agtagagtga agggtaaggg atgggagggt aagaattttg
     7861 acaagctgtg gcaaaggaaa ctataccttt catttttaaa aagtgtaaat agaaaagttt
     7921 ttaacggttt tatatgaatt tcactataaa taagcatttt aagactgaca aatgttgaac
     7981 tgtatataca tttatcaact taactgccca gtttttggtg ctgaagtact gtaagtagaa
     8041 tttatcagta gcgtcctaat ttctgtgtct acacctgggg agaagctgtg atgctgtagt
     8101 taatcaactt acacaagtgc ttacacttgt gtaacttaca ctgataatct cggcaggagc
     8161 atccctgaga cacctacctt gtggtggtga ttgtccccat ttctactagg tgaaagttac
     8221 tcacccatag atggagctct tggatagcat tttattgtac aaatgtgttt caacaaccac
     8281 tttgtgactg ttcctagcta aggggaaatt taacttctct tgggtcatag acatctttaa
     8341 gaagctgatt attctatgaa ctctctcacc aaaaaaatac acatgccagg acacgtgtta
     8401 agattttgca tacaatttta gggacttaag aactcccaag accatccatg tattccaggt
     8461 taagccttct gttatggtca gctcattact tacaggtgta agtttttatc aaataaaata
     8521 tcttttggat acacatggat caggaaata
//
