LOCUS       XM_006507630           10048 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus EMSY, BRCA2-interacting transcriptional
            repressor (Emsy), transcript variant X25, mRNA.
ACCESSION   XM_006507630
VERSION     XM_006507630.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006507630.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10048
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..10048
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /note="EMSY, BRCA2-interacting transcriptional repressor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 mRNAs, 35 ESTs, 1236 long SRA reads, and
                     93% coverage of the annotated genomic feature by RNAseq
                     alignments, including 39 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
     CDS             3139..6495
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /codon_start=1
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X25"
                     /protein_id="XP_006507693.1"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
                     /translation="MPVVWPTLLDLSRDECKRILRKLELEAYAGVISALRAQGDLTKE
                     KKDLLGELSKVLSISTERHRAEVRRAVNDERLTTIAHKMNLSLYLGERPSYSMSGPNS
                     SSEWSIEGRRLVPLMPRLVPQTAFTVTANAVANAAVQHNASLPVPAETASKDGVSCSD
                     EDEKPRKRRRTNSSSSSPVVLKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPP
                     HMSPVKITFTKPSTQTTNTTTQKVIIVTTSPSSTFVPNILSKSHNYAAVTKLVPTSVI
                     ASTTQKPPVVITASQASLVTSSSNGNSSSTSSPISSTVAVTTVVSSTPSVVMSTVAQG
                     VSTSAIKVASTRLPSPKSLVSGPTQILAQFPKQHQQSPKQQLQQVQQQTQQPVAQPSS
                     VSQQQQPQQSALPPGIKPTIQIKQESGVKIITQQVQPSKILPKPVTATLPTSSNSPIM
                     VVSSNGAIMTTKLVTTPTGTQATYTRPTVSPSLGRVATTPGAATYVKTTSGSIITVVP
                     KSLATLGGKIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTT
                     LLNAGGEKTLQTVPAGAKPAIITATRPITKMIVTQPKGIGSAVQPAAKIIPTKIVYGQ
                     QGKTQVLIKPKPVTFQATVVSEQTRQLVTETLQQASRVADASNSSAQEGKEEPQGYTD
                     SSSSSTESSQSSQDSQPVVHVIASRRQDWSEHEIAMETSPTIIYQDVSSESQSATSTI
                     KALLELQQTTVKEKLESKPRQPTIDLSQMAVPIQMTQEKRHSPESPSIAVVESELVAE
                     YITTERTDEGTEVAFPLLVSHRSQPQQPSQPQRTLLQHVAQSQTATQTSVVVKSIPAS
                     SPGAITHIMQQALSSHTAFTKHSEELGTEEGEVEEMDTLDPQTGLFYRSALTQSQSTK
                     QQKLSQPQLEQTQLQVKTLQCFQTKQKQTIHLQADQLQHKLTQMPQLSIRHQKLNPLQ
                     QEQAQPKPDAQHTQHTVVAKDRQLPTLMAQPPQTVVQVLAVKTTQQLPKLQQAPNQPK
                     IYVQPQTPQSQMALPSSEKQPASQAIPQYAIPCHSSSNVVVEPSGLLELNNFTSQQLD
                     DDETAMEQDIDSSTEDGTEPSPSQSAVERS"
ORIGIN      
        1 ttttcttttt ctatttaaca gggtaaatgt gggaataggg gctggtgaga taactcagtg
       61 attaagagca ctgactgctc ttctggaggt catgagttca aatcccagca accacatggt
      121 ggctcataac cattcgtaat gagaaacaaa ttaaaacaaa caaacaaaca aacaaacaaa
      181 cataaaacag cctatgggtt ggagcaagca gggctggagc aagagggaga agggaagggg
      241 ggaaaggaaa aaaaaaagta taaattactt gtttaaaaaa aaagtgtgga aatagacatg
      301 ggactggtag ggctaggtaa gttttatgcg atgtaaggga gagctgtagt tttgagtctg
      361 atgcttaaga gaggacagta gggattttgg ttcatacctg taatcctcag gagggtctca
      421 agtttgaggc ttgcctagga tacatggtaa gaccttgact ccaaacaaca acaaacaaaa
      481 accaagtaat gaaaatggct aggagagggc tggcaagatg gctcagtggt taagagcgct
      541 gactgctctt ccaaaggtcc acttacatat aataaataaa taaattcttt aaaaagaaaa
      601 cggctaagag aaagggaagg tgtaaagtgg tatgtagtgt cagcagcatt gagacttggg
      661 agcttcttag aaacaggatc tggccctatc cccaaactac gaaattcaaa acttgcattt
      721 taccaggacc taccttcatg tgttcctgct aacattaaat cttgagaggt actactggct
      781 gaaggtagac tctaggacca agctgcctat atataacagg tagagttttc tcattgtgtg
      841 tgtgtgtgtg tgtgtgtacg ttggagatca gaggaaactt ctgtgaagcc agttctccca
      901 ctatcactgg aggattgaat tcaggtcatc aggcttgcaa gacagacaca caacacttgt
      961 tgaaccttct cgtcaacccc aggctgccaa aacttaaatt cttgttttat caatctactt
     1021 atgtgggacc ttagggatgc tttttaaccc gtaccaagga cctattatgt aagagatgga
     1081 gggtcaactc taataatctg tcacttattt ttgacttact gtaaaagttt ttgttgtctt
     1141 aaaagattta ctttcggtgt ctgggtattt tgcctgcgtg gatatctgta tactacatgt
     1201 gtccagtgcc taaggtactc ctgtaactga attaatggtt gtgagccata tgggtgctgg
     1261 gaatagaacc cagcttctct ggaagagagg ccagtgctct taagcactga gccatttctc
     1321 cagctcttta gagacagggc tctactatgt gaaccctctc agttcaccag ttcctgaaca
     1381 actgtgcttt cccatttata gagtggtgaa gcttaattac gcctgtctca cggagatgct
     1441 gcaagagtca aatcatagaa tgtctgttaa attacaaaac ctcctattaa aacttaattt
     1501 accagtgagg tggtggtggt gtacaccttt gattcctgtc tcgagaagac ttaatttact
     1561 accttgcaag gtattcttaa gaaactgacc tcaaaatagg gtgcaataag aaggccagga
     1621 gagctgtata ggaaatggtc ctttttattt ctgactaacc tacagctcca ttcaggagca
     1681 ggagtagact catatgcagt ggttcacaat ttacttaaaa acttcttctt ttttcttgtt
     1741 ttggtctcgg tgtctcttgc agtccagtct gaccctgcat tcctcatctt cttccacttc
     1801 tacagtgctg agattataaa tgtaattcat aatgaactag gaaaagaact ttcattcacg
     1861 ttgtgtatct taatattccc acagggtagt ttttctcgtg tgtccatcct aacatccctt
     1921 agtgctagga atccgattca ggtctccagg tcttgcacat acttgacaag caatctgcca
     1981 ttgagctaga tgtcctccca gtggttaccc tagttttcac gggaatctgc taacagaagg
     2041 atgcacacta acaattcctc aagatttgca ctttcattgc atccgatgct accagagttc
     2101 tttatttaga gggaggacac aacaaaattc gatgggattt ataatactag aaattaactt
     2161 tgagttcttg gatcagagaa acaatatatt gggtccctat cgatctgtaa aataggggca
     2221 caaggcctcc acaacattgt gtggttaaga acaaaggctg atggtgaacc taccatgtcg
     2281 tagtgcctca agtaagtccc ttcttccctt tgtcagattt tgcacgagat atcactacct
     2341 ctcctacttc gtacatggcg taactccaag ctgagaccgc tcggattcct ttcctccact
     2401 tgcaactcct aacaccgaga aaggtgtacg ggccactgtg aggtcttctc tctccgtagt
     2461 ggataacctt tcttgagttg tcgtttgggt ggctggaaga cgctgatgac tactcccaag
     2521 cgtctacgga accagatctt aatcctcaac tgggcatcag ggaccaagct gtgttctttt
     2581 catcccaacc ctcgctagag tgaaaaggtc gaagctcagc tccaattaca gacgccatct
     2641 tgaccgctac gtgtgacgcc acacgtacag ccgaaagagc agctgattgg ctgggaaaga
     2701 ccggaggata ggcgcgcgaa gctggagact ggagggtaat gtagaagccg aaaggaacta
     2761 cactcccaga cttccttgcg catgtgacca gcaagcagca agagaaagag gagcgaggtt
     2821 ggactcggac tacaactccc actaggaccc gcgttgtccg ccctttcctt tcaaaaggca
     2881 gaggaaaagg gacaggaaga atggaggctt ttgagtgctc gtttctcaaa aggcgggaaa
     2941 ggcgaactac acctcccggc gagccgcgcg cgcctgcgcc tgcgctctgg tatctgtcgc
     3001 catcttgccc cttctgaggc accgcaaaca aacctaattc ctggtgtccc ctagtcttgg
     3061 cggaggagcc ttttagatga gccccgaaag gccgggcagg gaggacaagc tctttggggc
     3121 taccagacag aagcagcaat gcctgttgtg tggccaaccc ttttggatct cagcagggat
     3181 gaatgcaaac ggattcttcg aaaattggaa ctggaggcat atgctggagt tatcagtgca
     3241 cttcgggcac aaggggacct caccaaggaa aagaaagatc ttcttggaga gctctcaaaa
     3301 gtccttagca tctcaacaga gcgccaccgt gctgaagttc ggagagcagt aaacgatgaa
     3361 cggttaacaa caattgcaca taaaatgaat ttatccttat atttgggtga aagaccaagt
     3421 tacagtatgt ctggacctaa tagttcttca gagtggtcca tcgaaggacg tagattggta
     3481 cctctgatgc ccaggctggt tccccagact gccttcactg taacagcgaa tgctgtggcc
     3541 aatgcagctg tccagcacaa tgcgtccctt cctgtgcctg cagagacagc aagcaaagac
     3601 ggcgttagct gctcagatga agatgaaaaa cccagaaaac gcaggcgaac aaactcctct
     3661 agctcctccc ctgttgtcct caaggaagtt ccaaaggctg ttgttccggt ctcaaagacg
     3721 atcactgtgc ctgtgagtgg aagtcccaag atgagcaaca ttatgcagag cattgccaac
     3781 tccttaccac cccatatgtc acctgtgaaa ataacgttta ccaaaccatc aacacagaca
     3841 acaaacacaa caacacagaa ggttattata gtgaccacat caccaagttc aacctttgtg
     3901 cccaacattc tctccaaatc tcataactat gcagcagtca ctaagcttgt accaacatca
     3961 gtcattgcct ccacgactca gaagccacct gttgttataa ctgcgtccca ggcctctctg
     4021 gtcaccagta gcagcaatgg caacagcagt tctacgtcat cacctatttc tagtacagtt
     4081 gcagtaacaa cggtggtatc ttccacaccg tccgtggtca tgtcaacagt agcacaaggt
     4141 gtatccacat cagcaatcaa agtggcatcg acaagacttc cttcccccaa aagcttagtg
     4201 agtggcccta cccagattct tgcacagttt cctaaacagc atcagcagtc tcctaagcag
     4261 cagttacagc aagtacaaca acagacacag cagccagtgg cccagccttc ttcagtgtct
     4321 cagcagcagc agcctcagca gtcagcattg ccgcctggta tcaaacctac catccagatc
     4381 aaacaggagt caggtgttaa aatcatcaca cagcaggttc aaccaagtaa aatcttaccc
     4441 aaaccagtga ctgcaactct acccaccagt agcaattccc caattatggt ggttagcagt
     4501 aatggtgcaa ttatgacaac taaactggta accactccta ccggtactca ggcaacctat
     4561 acccggccaa cagtgagccc atccttaggt cgtgtggcta caacccctgg agctgcaacc
     4621 tatgtgaaaa ctaccagtgg cagcatcatc actgtagtac ccaaatcatt agctaccttg
     4681 ggaggcaaga taattagcag taatattgtt tctggaacga ctaccaaaat cactacaatc
     4741 ccaatgactt ccaagcccaa tgtgattgtt gtacaaaaga ctacaggaaa aggaacgacc
     4801 attcaaggcc tccctggcaa aaacgttgtc acaaccttgc taaatgctgg aggagaaaag
     4861 actcttcaga cagtgccagc tggagccaag ccagctataa ttactgctac aagacccatc
     4921 accaaaatga ttgtaacaca gcccaaagga ataggttccg cagtacagcc agcagctaaa
     4981 atcattccaa caaaaattgt gtatggacaa caagggaaaa cacaggttct aattaaaccc
     5041 aaaccagtga catttcaagc tacagttgtc agtgaacaaa caaggcagct ggtaacagaa
     5101 acattacagc aagcatccag ggtagcagat gccagtaatt catctgctca ggaaggaaaa
     5161 gaggagccac agggttacac agacagtagt tcttcttcca cagagtcctc ccagagttct
     5221 caagattccc agcctgtagt tcatgtaatt gcttcccggc gtcaggattg gtcagaacat
     5281 gagattgcaa tggagactag ccccaccata atatatcagg atgtatccag tgaatcacaa
     5341 tcagccactt caacaatcaa agctctgtta gaactccaac agacaacagt aaaggaaaaa
     5401 ttggaatcta aaccaagaca acccactatt gacttgagtc aaatggcagt acctattcag
     5461 atgacccagg aaaagagaca ttctcctgag agtccatcca ttgctgtggt agagtcagaa
     5521 ctagttgctg aatacatcac cacggaacgc actgatgagg ggacagaggt tgcttttccc
     5581 cttctagtca gccatcgctc ccagccccaa cagccttccc agccccagcg gaccctgctt
     5641 caacatgtgg ctcagtcaca gactgcgacg cagacttcgg tggtagtaaa gtccatccca
     5701 gcgtcttccc ctggagcaat cacccacatc atgcagcagg cattaagcag tcacaccgct
     5761 tttacgaaac acagtgagga acttggaact gaggagggtg aggttgaaga gatggacaca
     5821 ttggatcctc agacaggtct gttttaccgc tctgccctga cacaatcgca gtcaaccaaa
     5881 cagcagaaac ttagccagcc ccagctggaa cagactcagc tgcaagtgaa aactctgcag
     5941 tgcttccaga ccaaacagaa gcagaccatc cacctgcagg cagaccaact ccagcacaaa
     6001 ctcacacaga tgccccagct ctctatcagg catcagaaac tgaatcctct ccagcaggaa
     6061 caagcacagc ccaagccaga tgcacagcac acacagcata ctgtggtggc caaagacagg
     6121 cagcttccta ccttaatggc acagcccccg caaactgtag tacaggtgct tgccgtgaaa
     6181 accacacagc agcttcctaa actgcagcaa gctccgaacc aaccaaaaat ctacgtgcaa
     6241 ccccaaactc ctcagagcca gatggcactc ccctcttcag agaaacagcc tgcaagccag
     6301 gccattcccc agtatgctat tccttgtcac tccagctcca atgtggtggt ggagcccagt
     6361 gggcttctag agttgaacaa cttcaccagt cagcagctag atgacgacga gacagccatg
     6421 gagcaggaca tagacagcag cacggaggac gggactgagc ccagcccctc tcagagcgct
     6481 gtagaacggt cctagtgtgc agacgccgga gtgcacttta gagcctgcgt ggttaccaaa
     6541 tgtccaggga aacttaaaat ttgttatagt aaaaaagaaa aaaaaaaaaa agaaagaaag
     6601 aaaaaagcac tttgctcata tttaggctgg ggacctagaa gcattttaac aaaattaaac
     6661 tcacagagga atgtacttta aaaaaaaaaa atagaaaaag aaaaaaaaaa aagcagagga
     6721 aacgatgcac cccatggagc ccggcacctt gttggtgcta agcagcgaga agagactttc
     6781 ctgtgagtgg tcctcgactg ctttccactg agcaaatacc accagagagt atgaaaagga
     6841 aaagaaagga gaatatgaag agtttgtatt tttgaaatga tgtatctgaa cagtttttca
     6901 aaaattgtgt ttgtttttgc aaatccctgg agatgttgat ttggctagca ttttacattt
     6961 gctcagttca tgattagttt atgaatacct agggaagtcc tggcattgga gtccttgctg
     7021 gacggtagac atcagtcagg ttgctgcctg ggcagtttgg ggtggcttgt acatgtgctc
     7081 cttggttgta tactaattta ttgtggagtt ccacacttgc ctatttattt aatgtaaatg
     7141 ttttgaagca ggccgaatcc cttttcctac atgtcctggg aagctggatc cctggccttc
     7201 ccaccttccc accccctcac ccccctttaa gaagacggat tagagaagat ttggtccgga
     7261 agcagaggaa aagacatttc tagcccaaag gaaatgctca gtggtgttcc tgaaaatgag
     7321 ctctgctcat tggatgcttt ctcgacaccg acgttgcaca cccgtgttgg actgagactt
     7381 tgaaaacaac tttgacttac tttggtttaa atcctttgaa atgtatgaaa atgttcactt
     7441 acagttctaa atgtaatgtt tttaagtttt taatttttta gggtgcagtt tgtttacgtg
     7501 caggtgtggt cttgtgattg ctgtctatca caagtagagt gaagggtaag ggatgggagg
     7561 gtaagaattt tgacaagctg tggcaaagga aactatacct ttcattttta aaaagtgtaa
     7621 atagaaaagt ttttaacggt tttatatgaa tttcactata aataagcatt ttaagactga
     7681 caaatgttga actgtatata catttatcaa cttaactgcc cagtttttgg tgctgaagta
     7741 ctgtaagtag aatttatcag tagcgtccta atttctgtgt ctacacctgg ggagaagctg
     7801 tgatgctgta gttaatcaac ttacacaagt gcttacactt gtgtaactta cactgataat
     7861 ctcggcagga gcatccctga gacacctacc ttgtggtggt gattgtcccc atttctacta
     7921 ggtgaaagtt actcacccat agatggagct cttggatagc attttattgt acaaatgtgt
     7981 ttcaacaacc actttgtgac tgttcctagc taaggggaaa tttaacttct cttgggtcat
     8041 agacatcttt aagaagctga ttattctatg aactctctca ccaaaaaaat acacatgcca
     8101 ggacacgtgt taagattttg catacaattt tagggactta agaactccca agaccatcca
     8161 tgtattccag gttaagcctt ctgttatggt cagctcatta cttacaggtg taagttttta
     8221 tcaaataaaa tatcttttgg atacacatgg atcaggaaat aagaacaaac ttgaataagt
     8281 tatgttccat ctctactatc agcataccat gtccgtgttt tgagaatata gcctctctgt
     8341 gctccagcag gttaaatgac aaatgagtct actttagtct gcttttaaag aatcacttgt
     8401 gcatatatat ttgcacacat acatgaatat caagtaagat ttattttttt tcctttgaat
     8461 ggttctaatg ccaaatagag catgatttta tgaacaaata atattcactc ctattttatg
     8521 tgccaggtaa ggctctagcc accaaggcta ttacagtgag gacatgggaa atcctaccca
     8581 gatggagctt acaggcaagg cttcctgctc gtgaaggaag ggggagcaac aattccagag
     8641 ttctcctctt ttttttaatc agcacatatt cagcatatgt agtggttttg tctgtgtgtg
     8701 tggaggacag agatcaaccc tggggttgtt gcatagaggc catcttcctg attcctgggt
     8761 tgctgttttt taaattacat ttttatgtat tttatttttg tatatatatg tgtgtgtatg
     8821 tattcattat gtctgtatac atgtgcaggc tggaggacaa cttacaggag ttggctctct
     8881 tgccacctgg gtcatgggaa tttgactcag gtgtcaggcc tggcagcagg aggctttacc
     8941 cactgaggca tcttgcaggt ccccaccttg ttttttgcaa cagggatctg gagcttgctg
     9001 actagtatag acctgctgcc tgcatagatt tgctgcctag caggtccact tccccagtgc
     9061 tggggttata ggcacaagtc atggcctggc ttttcatgtg agagctggtt tctgtttgtg
     9121 tggcaagcac tgtactgacc tatctcccca gggccagcac tgagtttctt agacattctc
     9181 caggttcccc ccaaccctta ttttacatgt gtgagtgttt ggcctataca tttctggtgc
     9241 accatataca ttcagtgcct acccatggat tccctgggac tgaagttaca gacaatgtga
     9301 gataccatgt gagtgctggg aattgaaacc aggccctgtt agatcagcta ccatggctct
     9361 agatgactct taactactga gccatctctc caggcccttt cttaagtgga ttgacaatga
     9421 cagaacatgt ctggatccat ccttagacat gcttttgctg aagttgatag cactatttct
     9481 ttgttttatg tttaagtcca taaattaaaa gtaattgcaa gctatctctg aagaatattt
     9541 agagataatg atgtacttcg gcaaagccat tagaattctt ttcatgccgg gcgtggtggt
     9601 gcacgtcttt aatcccagca cttgggaggc agaggcaggt ggatttctga gtttgaggcc
     9661 agcctggtct acagagtgag ttccaggaca gccagggcta cacagagaaa ccctgtctca
     9721 gaaaggaaaa aaaaaaaaaa aaaaaaaaaa aaaaccaaca aaaagaattc tgttgatcat
     9781 tgaagatttg gttttgagtt ggagatgcag ctcagttagt aggatgcttg cctggaatgc
     9841 tcagctctga gtttgattct tagcaccaca gaaaaactag gcagggtggt ggatgcttat
     9901 aattccagtt cttgggggtt ggaagcagga gaatgggaag ccacagtcat tccctaccac
     9961 ataatacatt tgaccccaaa tgtattatct caaaagagat ttggtttaaa gtaaactaat
    10021 aaatacctac tattgcaggt gtacctta
//
