LOCUS       XM_006507616            8891 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus EMSY, BRCA2-interacting transcriptional
            repressor (Emsy), transcript variant X2, mRNA.
ACCESSION   XM_006507616
VERSION     XM_006507616.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006507616.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8891
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..8891
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /note="EMSY, BRCA2-interacting transcriptional repressor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 mRNAs, 32 ESTs, 580 long SRA reads, 1
                     Protein, and 93% coverage of the annotated genomic feature
                     by RNAseq alignments, including 25 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
     CDS             3139..7125
                     /gene="Emsy"
                     /gene_synonym="2210018M11Rik; 2310016L09Rik"
                     /codon_start=1
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X2"
                     /protein_id="XP_006507679.1"
                     /db_xref="GeneID:233545"
                     /db_xref="MGI:MGI:1924203"
                     /translation="MPVVWPTLLDLSRDECKRILRKLELEAYAGVISALRAQGDLTKE
                     KKDLLGELSKVLSISTERHRAEVRRAVNDERLTTIAHKMNLSLYLGERPSYSMSGPNS
                     SSEWSIEGRRLVPLMPRLVPQTAFTVTANAVANAAVQHNASLPVPAETASKDVVCYSY
                     TSTTSTPTSTPVPSGSIATVKSPRPASPASSVVVLPSGSTVYVKSVSCSDEDEKPRKR
                     RRTNSSSSSPVVLKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKIT
                     FTKPSTQTTNTTTQKVIIVTTSPSSTFVPNILSKSHNYAAVTKLVPTSVIASTTQKPP
                     VVITASQASLVTSSSNGNSSSTSSPISSTVAVTTVVSSTPSVVMSTVAQGVSTSAIKV
                     ASTRLPSPKSLVSGPTQILAQFPKQHQQSPKQQLQQVQQQTQQPVAQPSSVSQQQQPQ
                     QSALPPGIKPTIQIKQESGVKIITQQVQPSKILPKPVTATLPTSSNSPIMVVSSNGAI
                     MTTKLVTTPTGTQATYTRPTVSPSLGRVATTPGAATYVKTTSGSIITVVPKSLATLGG
                     KIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGGEK
                     TLQTVPAGAKPAIITATRPITKMIVTQPKGIGSAVQPAAKIIPTKIVYGQQGKTQVLI
                     KPKPVTFQATVVSEQTRQLVTETLQQASRVADASNSSAQEGKEEPQGYTDSSSSSTES
                     SQSSQDSQPVVHVIASRRQDWSEHEIAMETSPTIIYQDVSSESQSATSTIKALLELQQ
                     TTVKEKLESKPRQPTIDLSQMAVPIQMTQEKRHSPESPSIAVVESELVAEYITTERTD
                     EGTEVAFPLLVSHRSQPQQPSQPQRTLLQHVAQSQTATQTSVVVKSIPASSPGAITHI
                     MQQALSSHTAFTKHSEELGTEEGEVEEMDTLDPQTGLFYRSALTQSQSTKQQKLSQPQ
                     LEQTQLQVKTLQCFQTKQKQTIHLQADQLQHKLTQMPQLSIRHQKLNPLQQEQAQPKP
                     DAQHTQHTVVAKDRQLPTLMAQPPQTVVQVLAVKTTQQLPKLQQAPNQPKIYVQPQTP
                     QSQMALPSSEKQPASQVEQPIITQGSSVTKITFEGRQPPTVTKITGGSSVPKLTSPVT
                     SISPIQASEKTAVSDILQMSLMEAQIDTNVEHMVVDPPKKALATNVLTGEAGALPSTH
                     VVVAGMTKCRESCSSPSAVGPPLTTRKIEAAGVPTTGQFMRIQNVGQKKAEESPTEII
                     IQAIPQYAIPCHSSSNVVVEPSGLLELNNFTSQQLDDDETAMEQDIDSSTEDGTEPSP
                     SQSAVERS"
ORIGIN      
        1 ttttcttttt ctatttaaca gggtaaatgt gggaataggg gctggtgaga taactcagtg
       61 attaagagca ctgactgctc ttctggaggt catgagttca aatcccagca accacatggt
      121 ggctcataac cattcgtaat gagaaacaaa ttaaaacaaa caaacaaaca aacaaacaaa
      181 cataaaacag cctatgggtt ggagcaagca gggctggagc aagagggaga agggaagggg
      241 ggaaaggaaa aaaaaaagta taaattactt gtttaaaaaa aaagtgtgga aatagacatg
      301 ggactggtag ggctaggtaa gttttatgcg atgtaaggga gagctgtagt tttgagtctg
      361 atgcttaaga gaggacagta gggattttgg ttcatacctg taatcctcag gagggtctca
      421 agtttgaggc ttgcctagga tacatggtaa gaccttgact ccaaacaaca acaaacaaaa
      481 accaagtaat gaaaatggct aggagagggc tggcaagatg gctcagtggt taagagcgct
      541 gactgctctt ccaaaggtcc acttacatat aataaataaa taaattcttt aaaaagaaaa
      601 cggctaagag aaagggaagg tgtaaagtgg tatgtagtgt cagcagcatt gagacttggg
      661 agcttcttag aaacaggatc tggccctatc cccaaactac gaaattcaaa acttgcattt
      721 taccaggacc taccttcatg tgttcctgct aacattaaat cttgagaggt actactggct
      781 gaaggtagac tctaggacca agctgcctat atataacagg tagagttttc tcattgtgtg
      841 tgtgtgtgtg tgtgtgtacg ttggagatca gaggaaactt ctgtgaagcc agttctccca
      901 ctatcactgg aggattgaat tcaggtcatc aggcttgcaa gacagacaca caacacttgt
      961 tgaaccttct cgtcaacccc aggctgccaa aacttaaatt cttgttttat caatctactt
     1021 atgtgggacc ttagggatgc tttttaaccc gtaccaagga cctattatgt aagagatgga
     1081 gggtcaactc taataatctg tcacttattt ttgacttact gtaaaagttt ttgttgtctt
     1141 aaaagattta ctttcggtgt ctgggtattt tgcctgcgtg gatatctgta tactacatgt
     1201 gtccagtgcc taaggtactc ctgtaactga attaatggtt gtgagccata tgggtgctgg
     1261 gaatagaacc cagcttctct ggaagagagg ccagtgctct taagcactga gccatttctc
     1321 cagctcttta gagacagggc tctactatgt gaaccctctc agttcaccag ttcctgaaca
     1381 actgtgcttt cccatttata gagtggtgaa gcttaattac gcctgtctca cggagatgct
     1441 gcaagagtca aatcatagaa tgtctgttaa attacaaaac ctcctattaa aacttaattt
     1501 accagtgagg tggtggtggt gtacaccttt gattcctgtc tcgagaagac ttaatttact
     1561 accttgcaag gtattcttaa gaaactgacc tcaaaatagg gtgcaataag aaggccagga
     1621 gagctgtata ggaaatggtc ctttttattt ctgactaacc tacagctcca ttcaggagca
     1681 ggagtagact catatgcagt ggttcacaat ttacttaaaa acttcttctt ttttcttgtt
     1741 ttggtctcgg tgtctcttgc agtccagtct gaccctgcat tcctcatctt cttccacttc
     1801 tacagtgctg agattataaa tgtaattcat aatgaactag gaaaagaact ttcattcacg
     1861 ttgtgtatct taatattccc acagggtagt ttttctcgtg tgtccatcct aacatccctt
     1921 agtgctagga atccgattca ggtctccagg tcttgcacat acttgacaag caatctgcca
     1981 ttgagctaga tgtcctccca gtggttaccc tagttttcac gggaatctgc taacagaagg
     2041 atgcacacta acaattcctc aagatttgca ctttcattgc atccgatgct accagagttc
     2101 tttatttaga gggaggacac aacaaaattc gatgggattt ataatactag aaattaactt
     2161 tgagttcttg gatcagagaa acaatatatt gggtccctat cgatctgtaa aataggggca
     2221 caaggcctcc acaacattgt gtggttaaga acaaaggctg atggtgaacc taccatgtcg
     2281 tagtgcctca agtaagtccc ttcttccctt tgtcagattt tgcacgagat atcactacct
     2341 ctcctacttc gtacatggcg taactccaag ctgagaccgc tcggattcct ttcctccact
     2401 tgcaactcct aacaccgaga aaggtgtacg ggccactgtg aggtcttctc tctccgtagt
     2461 ggataacctt tcttgagttg tcgtttgggt ggctggaaga cgctgatgac tactcccaag
     2521 cgtctacgga accagatctt aatcctcaac tgggcatcag ggaccaagct gtgttctttt
     2581 catcccaacc ctcgctagag tgaaaaggtc gaagctcagc tccaattaca gacgccatct
     2641 tgaccgctac gtgtgacgcc acacgtacag ccgaaagagc agctgattgg ctgggaaaga
     2701 ccggaggata ggcgcgcgaa gctggagact ggagggtaat gtagaagccg aaaggaacta
     2761 cactcccaga cttccttgcg catgtgacca gcaagcagca agagaaagag gagcgaggtt
     2821 ggactcggac tacaactccc actaggaccc gcgttgtccg ccctttcctt tcaaaaggca
     2881 gaggaaaagg gacaggaaga atggaggctt ttgagtgctc gtttctcaaa aggcgggaaa
     2941 ggcgaactac acctcccggc gagccgcgcg cgcctgcgcc tgcgctctgg tatctgtcgc
     3001 catcttgccc cttctgaggc accgcaaaca aacctaattc ctggtgtccc ctagtcttgg
     3061 cggaggagcc ttttagatga gccccgaaag gccgggcagg gaggacaagc tctttggggc
     3121 taccagacag aagcagcaat gcctgttgtg tggccaaccc ttttggatct cagcagggat
     3181 gaatgcaaac ggattcttcg aaaattggaa ctggaggcat atgctggagt tatcagtgca
     3241 cttcgggcac aaggggacct caccaaggaa aagaaagatc ttcttggaga gctctcaaaa
     3301 gtccttagca tctcaacaga gcgccaccgt gctgaagttc ggagagcagt aaacgatgaa
     3361 cggttaacaa caattgcaca taaaatgaat ttatccttat atttgggtga aagaccaagt
     3421 tacagtatgt ctggacctaa tagttcttca gagtggtcca tcgaaggacg tagattggta
     3481 cctctgatgc ccaggctggt tccccagact gccttcactg taacagcgaa tgctgtggcc
     3541 aatgcagctg tccagcacaa tgcgtccctt cctgtgcctg cagagacagc aagcaaagac
     3601 gtggtttgct attcctacac aagtaccacg tctaccccaa cctctacccc tgttccaagt
     3661 ggcagcatag caacggttaa gtctccaaga cctgccagtc ctgcctccag tgtagttgtc
     3721 ttgccaagtg gaagtactgt atatgtcaaa agcgttagct gctcagatga agatgaaaaa
     3781 cccagaaaac gcaggcgaac aaactcctct agctcctccc ctgttgtcct caaggaagtt
     3841 ccaaaggctg ttgttccggt ctcaaagacg atcactgtgc ctgtgagtgg aagtcccaag
     3901 atgagcaaca ttatgcagag cattgccaac tccttaccac cccatatgtc acctgtgaaa
     3961 ataacgttta ccaaaccatc aacacagaca acaaacacaa caacacagaa ggttattata
     4021 gtgaccacat caccaagttc aacctttgtg cccaacattc tctccaaatc tcataactat
     4081 gcagcagtca ctaagcttgt accaacatca gtcattgcct ccacgactca gaagccacct
     4141 gttgttataa ctgcgtccca ggcctctctg gtcaccagta gcagcaatgg caacagcagt
     4201 tctacgtcat cacctatttc tagtacagtt gcagtaacaa cggtggtatc ttccacaccg
     4261 tccgtggtca tgtcaacagt agcacaaggt gtatccacat cagcaatcaa agtggcatcg
     4321 acaagacttc cttcccccaa aagcttagtg agtggcccta cccagattct tgcacagttt
     4381 cctaaacagc atcagcagtc tcctaagcag cagttacagc aagtacaaca acagacacag
     4441 cagccagtgg cccagccttc ttcagtgtct cagcagcagc agcctcagca gtcagcattg
     4501 ccgcctggta tcaaacctac catccagatc aaacaggagt caggtgttaa aatcatcaca
     4561 cagcaggttc aaccaagtaa aatcttaccc aaaccagtga ctgcaactct acccaccagt
     4621 agcaattccc caattatggt ggttagcagt aatggtgcaa ttatgacaac taaactggta
     4681 accactccta ccggtactca ggcaacctat acccggccaa cagtgagccc atccttaggt
     4741 cgtgtggcta caacccctgg agctgcaacc tatgtgaaaa ctaccagtgg cagcatcatc
     4801 actgtagtac ccaaatcatt agctaccttg ggaggcaaga taattagcag taatattgtt
     4861 tctggaacga ctaccaaaat cactacaatc ccaatgactt ccaagcccaa tgtgattgtt
     4921 gtacaaaaga ctacaggaaa aggaacgacc attcaaggcc tccctggcaa aaacgttgtc
     4981 acaaccttgc taaatgctgg aggagaaaag actcttcaga cagtgccagc tggagccaag
     5041 ccagctataa ttactgctac aagacccatc accaaaatga ttgtaacaca gcccaaagga
     5101 ataggttccg cagtacagcc agcagctaaa atcattccaa caaaaattgt gtatggacaa
     5161 caagggaaaa cacaggttct aattaaaccc aaaccagtga catttcaagc tacagttgtc
     5221 agtgaacaaa caaggcagct ggtaacagaa acattacagc aagcatccag ggtagcagat
     5281 gccagtaatt catctgctca ggaaggaaaa gaggagccac agggttacac agacagtagt
     5341 tcttcttcca cagagtcctc ccagagttct caagattccc agcctgtagt tcatgtaatt
     5401 gcttcccggc gtcaggattg gtcagaacat gagattgcaa tggagactag ccccaccata
     5461 atatatcagg atgtatccag tgaatcacaa tcagccactt caacaatcaa agctctgtta
     5521 gaactccaac agacaacagt aaaggaaaaa ttggaatcta aaccaagaca acccactatt
     5581 gacttgagtc aaatggcagt acctattcag atgacccagg aaaagagaca ttctcctgag
     5641 agtccatcca ttgctgtggt agagtcagaa ctagttgctg aatacatcac cacggaacgc
     5701 actgatgagg ggacagaggt tgcttttccc cttctagtca gccatcgctc ccagccccaa
     5761 cagccttccc agccccagcg gaccctgctt caacatgtgg ctcagtcaca gactgcgacg
     5821 cagacttcgg tggtagtaaa gtccatccca gcgtcttccc ctggagcaat cacccacatc
     5881 atgcagcagg cattaagcag tcacaccgct tttacgaaac acagtgagga acttggaact
     5941 gaggagggtg aggttgaaga gatggacaca ttggatcctc agacaggtct gttttaccgc
     6001 tctgccctga cacaatcgca gtcaaccaaa cagcagaaac ttagccagcc ccagctggaa
     6061 cagactcagc tgcaagtgaa aactctgcag tgcttccaga ccaaacagaa gcagaccatc
     6121 cacctgcagg cagaccaact ccagcacaaa ctcacacaga tgccccagct ctctatcagg
     6181 catcagaaac tgaatcctct ccagcaggaa caagcacagc ccaagccaga tgcacagcac
     6241 acacagcata ctgtggtggc caaagacagg cagcttccta ccttaatggc acagcccccg
     6301 caaactgtag tacaggtgct tgccgtgaaa accacacagc agcttcctaa actgcagcaa
     6361 gctccgaacc aaccaaaaat ctacgtgcaa ccccaaactc ctcagagcca gatggcactc
     6421 ccctcttcag agaaacagcc tgcaagccag gtggagcagc caattataac tcaaggatcc
     6481 tctgttacaa agataacatt tgaggggcgc cagcctccca cagttacaaa gataactggt
     6541 ggcagttctg ttcctaagct gacatcacca gttacaagca tatctcccat tcaggcctct
     6601 gagaagacag cagtgtcaga cattttgcaa atgtctttga tggaagctca gattgataca
     6661 aatgtagaac atatggtagt ggatccccca aagaaggctc tagccaccaa tgtgctcact
     6721 ggtgaggcag gagctctacc ctccacccat gtggtggtgg cagggatgac gaaatgtaga
     6781 gagtcctgtt caagtccatc tgctgttggc cctcccctaa cgaccagaaa aatcgaagca
     6841 gcaggagtgc ctacgacagg ccagttcatg cgtattcaga atgtaggcca aaagaaagct
     6901 gaagagagcc caacagaaat tatcatccag gccattcccc agtatgctat tccttgtcac
     6961 tccagctcca atgtggtggt ggagcccagt gggcttctag agttgaacaa cttcaccagt
     7021 cagcagctag atgacgacga gacagccatg gagcaggaca tagacagcag cacggaggac
     7081 gggactgagc ccagcccctc tcagagcgct gtagaacggt cctagtgtgc agacgccgga
     7141 gtgcacttta gagcctgcgt ggttaccaaa tgtccaggga aacttaaaat ttgttatagt
     7201 aaaaaagaaa aaaaaaaaaa agaaagaaag aaaaaagcac tttgctcata tttaggctgg
     7261 ggacctagaa gcattttaac aaaattaaac tcacagagga atgtacttta aaaaaaaaaa
     7321 atagaaaaag aaaaaaaaaa aagcagagga aacgatgcac cccatggagc ccggcacctt
     7381 gttggtgcta agcagcgaga agagactttc ctgtgagtgg tcctcgactg ctttccactg
     7441 agcaaatacc accagagagt atgaaaagga aaagaaagga gaatatgaag agtttgtatt
     7501 tttgaaatga tgtatctgaa cagtttttca aaaattgtgt ttgtttttgc aaatccctgg
     7561 agatgttgat ttggctagca ttttacattt gctcagttca tgattagttt atgaatacct
     7621 agggaagtcc tggcattgga gtccttgctg gacggtagac atcagtcagg ttgctgcctg
     7681 ggcagtttgg ggtggcttgt acatgtgctc cttggttgta tactaattta ttgtggagtt
     7741 ccacacttgc ctatttattt aatgtaaatg ttttgaagca ggccgaatcc cttttcctac
     7801 atgtcctggg aagctggatc cctggccttc ccaccttccc accccctcac ccccctttaa
     7861 gaagacggat tagagaagat ttggtccgga agcagaggaa aagacatttc tagcccaaag
     7921 gaaatgctca gtggtgttcc tgaaaatgag ctctgctcat tggatgcttt ctcgacaccg
     7981 acgttgcaca cccgtgttgg actgagactt tgaaaacaac tttgacttac tttggtttaa
     8041 atcctttgaa atgtatgaaa atgttcactt acagttctaa atgtaatgtt tttaagtttt
     8101 taatttttta gggtgcagtt tgtttacgtg caggtgtggt cttgtgattg ctgtctatca
     8161 caagtagagt gaagggtaag ggatgggagg gtaagaattt tgacaagctg tggcaaagga
     8221 aactatacct ttcattttta aaaagtgtaa atagaaaagt ttttaacggt tttatatgaa
     8281 tttcactata aataagcatt ttaagactga caaatgttga actgtatata catttatcaa
     8341 cttaactgcc cagtttttgg tgctgaagta ctgtaagtag aatttatcag tagcgtccta
     8401 atttctgtgt ctacacctgg ggagaagctg tgatgctgta gttaatcaac ttacacaagt
     8461 gcttacactt gtgtaactta cactgataat ctcggcagga gcatccctga gacacctacc
     8521 ttgtggtggt gattgtcccc atttctacta ggtgaaagtt actcacccat agatggagct
     8581 cttggatagc attttattgt acaaatgtgt ttcaacaacc actttgtgac tgttcctagc
     8641 taaggggaaa tttaacttct cttgggtcat agacatcttt aagaagctga ttattctatg
     8701 aactctctca ccaaaaaaat acacatgcca ggacacgtgt taagattttg catacaattt
     8761 tagggactta agaactccca agaccatcca tgtattccag gttaagcctt ctgttatggt
     8821 cagctcatta cttacaggtg taagttttta tcaaataaaa tatcttttgg atacacatgg
     8881 atcaggaaat a
//
