LOCUS       NM_144872               3194 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Mus musculus echinoderm microtubule associated protein like 3
            (Eml3), transcript variant 1, mRNA.
ACCESSION   NM_144872
VERSION     NM_144872.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC022146.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC022146.1, BC023878.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="FVB/N"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 6.04 cM"
     gene            1..3194
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /note="echinoderm microtubule associated protein like 3"
                     /db_xref="GeneID:225898"
                     /db_xref="MGI:MGI:2387612"
     exon            1..259
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     CDS             238..2931
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="echinoderm microtubule-associated protein-like 3
                     isoform 1"
                     /protein_id="NP_659121.1"
                     /db_xref="CCDS:CCDS29560.1"
                     /db_xref="GeneID:225898"
                     /db_xref="MGI:MGI:2387612"
                     /translation="MDGAAGPGEGPAHETLQTLSQRLRVQEEEMELVKAALAEALRLL
                     RLHGSTTTLQGSGISAPTRNSSITVPPGLPPTCSPSLVTRGTQTEEELEIVPSSGPPG
                     LSNGPPALQGGSEEPSGTQSEGGCSSSSGAGSPGPPGILRPVQPLQRSDTPRRNSSSS
                     SSPSERPRQKLSRKAASSANLLLRSGSTESRGNKDPLSSPGGPGSRRSNYNLEGISVK
                     MFLRGRPITMYIPSGIRSLEELPSGPPPETLSLDWVYGYRGRDSRSNLFVLRSGEVVY
                     FIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAGVDKDGK
                     PLQPVVHIWDSETLLKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWD
                     CSRGVKLAEIKSTNDSVLAVGFSPRDSSCIVTSGKSHVHFWNWSGGTGAPGNGLLARK
                     QGVFGKYKKPKFIPCFVFLPDGDILTGDSEGNILTWGRSVSDSKTPGRGGAKETYTIV
                     AQAHAHEGSIFALCLRRDGTVLSGGGRDRRLVQWGPGLVALQEAEIPEHFGAVRAIAE
                     GLGSELLVGTTKNALLRGDLAQGFSPVIQGHTDELWGLCTHPSQNRFLTCGHDRQLCL
                     WDGEGHALAWSMDLKETGLCADFHPSGAVVVVGLNTGRWLVLDTETREIVSDVTDGNE
                     QLSVVRYSPDGLYLAIGSHDNMIYIYSVSSCGTKSSRFGRCMGHSSFITHLDWSKDGN
                     FIMSNSGDYEILYWDVAGGCKLLRNRYESRDREWATYTCVLGFHVYGVWPDGSDGTDI
                     NSLCRSHNERVVAVADDFCKVHLFQYPCARAKAPSRMYSGHGSHVTSVRFTHDDSYLV
                     SLGGKDASIFQWRVLGAGSSGPAPATPSRTPSLSPASSLDV"
     exon            260..431
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            432..692
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            693..806
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            807..874
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            875..998
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1169
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1170..1239
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1240..1350
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1351..1446
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1447..1602
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1603..1744
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1745..1896
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1897..2022
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2023..2154
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2155..2222
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2223..2311
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2312..2409
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2410..2497
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2498..2596
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2597..2727
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2728..3180
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3162..3167
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /note="hexamer: AATAAA"
     polyA_site      3180
                     /gene="Eml3"
                     /gene_synonym="Emap-3"
                     /note="major polyA site"
ORIGIN      
        1 gcgcaggggc tccggacggc ccgtcaccgc accccgggag cctaaccccg agagagtaaa
       61 agaaccggtt ccacagcgcc cccctctaac tcctgacccc cacgctcgtc agcgcccccg
      121 aggggtggca cggctcccct ccgcgcgcgc tcgagtgctt ccttcccctc tccctagcca
      181 tggcccccgc ggcttagacg cctccgacga cgctgctcgg agcaacgcgg gggccggatg
      241 gacggggctg cggggcccgg tgagggccct gctcatgaga ccctgcagac cctgagccag
      301 cgacttcggg tgcaggaaga agagatggaa ctggtaaaag cggctttagc agaagccctt
      361 cgcctgctgc ggctgcatgg ctccaccaca accctgcagg gctctggcat atcagccccg
      421 acaaggaaca gcagcatcac agtccctcca ggactgccac ctacatgcag cccttccttg
      481 gtgaccagag gcacccaaac ggaagaagaa ttggagattg ttccatcctc tggaccccct
      541 ggcctgagca atggtcctcc agctcttcag gggggcagtg aagaacctag tgggacccag
      601 tctgaaggag ggtgcagcag cagcagtggg gcaggctccc ctggcccccc aggaatcctc
      661 aggccggtgc agcctcttca gcgttctgac acgccccgaa gaaattcttc ctcctcctcc
      721 tccccctcag agcggcccag gcagaaactc tccaggaagg cagcttcctc agctaacctg
      781 ctattgcggt cagggagcac agagagccgg gggaacaaag accctctgtc cagtcctggg
      841 ggtcccggat ctcggaggag caattataac ttagaaggca tttcagtgaa gatgttcctt
      901 cgtggccgtc ccatcaccat gtacattccg tctggcatcc gaagtcttga ggagctgccc
      961 agcggcccgc ccccagagac cctgagcctc gactgggttt atgggtacag gggtcgtgat
     1021 tctcgctcta atctatttgt gctgcgctct ggggaggtgg tctactttat tgcctgtgta
     1081 gtggtgctgt accggcctgg gggaggccca gggggtcctg gaggtggcgg ccagagacat
     1141 taccggggtc acacagactg cgttcgatgc cttgctgttc accctgatgg tgttcgtgta
     1201 gcctcaggac agacagctgg agtggacaag gatggaaagc ccctgcagcc cgtggttcat
     1261 atctgggact cagagacact cctaaaactg caggagattg gactgggtgc ctttgagcga
     1321 ggtgtggggg ccttggcctt ttcagcagcg gatcaaggtg cttttctgtg tgtggtggat
     1381 gattccaatg agcacatgct gtcagtgtgg gactgtagcc ggggagtgaa gctggctgag
     1441 attaagagta caaatgactc agtcctcgct gttggcttca gccctcgtga cagcagctgt
     1501 attgtcacca gtgggaaatc gcatgtccac ttttggaact ggagcggtgg gacaggggct
     1561 cccgggaatg ggctcctcgc ccggaagcag ggtgtttttg ggaaatacaa gaaacccaag
     1621 ttcatccctt gctttgtctt ccttcctgat ggagacatcc tcactggaga ttccgagggg
     1681 aacattctta cctggggtcg aagtgtctca gattccaaga ccccaggcag gggtggggcc
     1741 aaagagacct acacgatcgt ggcccaggcc catgctcacg aggggtccat ctttgccctg
     1801 tgtctccgcc gggatgggac agtgctgagt ggtggtgggc gggaccgacg actggtgcag
     1861 tgggggcccg ggttggtggc cctccaggag gcagagattc cagaacactt tggagctgtg
     1921 agggccattg ctgaagggct tggctctgag ctgctggtgg gaaccacaaa gaatgcatta
     1981 ctgaggggag atctggctca aggcttctcc cctgttatcc agggccacac tgatgagctc
     2041 tggggactgt gtacacatcc gtcccagaat cgcttcctca cctgtggcca tgaccggcag
     2101 ctctgcctgt gggatgggga aggccatgca ctggcctgga gcatggacct aaaggagacg
     2161 ggtttatgtg ctgacttcca cccaagtggg gcagttgtgg ttgtaggact gaacacaggg
     2221 aggtggttgg ttttggacac agagaccaga gagattgtat ccgatgtcac tgacggcaat
     2281 gaacagctct cagttgtccg gtacagccca gatgggttgt acctggctat tggttcccat
     2341 gacaacatga tctacatcta tagtgtttcc agttgtggca ctaagtccag ccgctttggc
     2401 agatgtatgg ggcactccag ttttatcact caccttgact ggtccaagga tgggaatttc
     2461 atcatgtcca attctgggga ttatgagatt ctttactggg atgtggctgg aggctgcaaa
     2521 ctgctgagga accgctatga gagcagagac cgggagtggg ctacctatac ctgtgtgctg
     2581 ggcttccacg tctatggtgt gtggcctgat ggctctgatg ggacagacat caactccctt
     2641 tgccgctccc acaatgaacg ggtggtggct gtggcagacg acttctgcaa agtacacctc
     2701 tttcagtacc catgtgctcg agccaaggcg ccaagtcgta tgtactcagg ccatggcagc
     2761 catgtgacta gtgtccggtt cacgcacgac gactcatacc ttgtctcctt aggtggcaag
     2821 gatgctagca tctttcagtg gcgagtgctg ggggcaggga gctctgggcc cgctcctgcc
     2881 acaccatcta gaacgccctc tctgtcccct gcctcctccc tggacgtgtg attgatgctg
     2941 gatggtcttg tccctctggt actgtggtct ggccccaccc tggccaaaac ccctaggacc
     3001 aaggacagtc ttttcctgtg ctggcttttt ctttgacttc atacattccc aattgcgcat
     3061 ttttctggag gggctaacca ccccactgca cacaaaataa caacagactt gctggctgag
     3121 ccaggcaacc cagctccgac accctctgct cggtgagggg caataaaaag aaaaaagtaa
     3181 aaaaaaaaaa aaaa
//
