LOCUS       NM_001256055            2419 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus eukaryotic translation initiation factor 3, subunit J2
            (Eif3j2), mRNA.
ACCESSION   NM_001256055 XM_001479281 XM_003086270
VERSION     NM_001256055.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC156546.7.
            
            On or before Dec 30, 2011 this sequence version replaced
            XM_001479281.2, XM_003086270.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC080788.1, CX216738.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2419              AC156546.7         97909-100327
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 23.33 cM"
     gene            1..2419
                     /gene="Eif3j2"
                     /gene_synonym="eIF3 p35; Eif3j-2; eIF3j-B; Gm9781"
                     /note="eukaryotic translation initiation factor 3, subunit
                     J2"
                     /db_xref="GeneID:100042807"
                     /db_xref="MGI:MGI:3704486"
     exon            1..2419
                     /gene="Eif3j2"
                     /gene_synonym="eIF3 p35; Eif3j-2; eIF3j-B; Gm9781"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..882
                     /gene="Eif3j2"
                     /gene_synonym="eIF3 p35; Eif3j-2; eIF3j-B; Gm9781"
                     /note="eIF-3-alpha; eukaryotic translation initiation
                     factor 3 subunit 1; eukaryotic translation initiation
                     factor 3 subunit J; eIF-3-alpha-B; eukaryotic translation
                     initiation factor 3 subunit 1-B"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 3
                     subunit J-B"
                     /protein_id="NP_001242984.1"
                     /db_xref="CCDS:CCDS57122.1"
                     /db_xref="GeneID:100042807"
                     /db_xref="MGI:MGI:3704486"
                     /translation="MAAAAAAAAAAAAGDSDSWDADTFSMEDPVRKVAGGGTAGGDRW
                     EGEDEDEDVKDNWDDDDDENKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEIKK
                     RLEEPEESKVLTPEEQLADKLRLKKLQEESDLELAKETFGVNNTVYGIDAMNPSSRDD
                     FTEFGKLLKDKITQYEKSLYYASFLEALVRDVCISLEIDDLKKITNSLTVLCSEKQKQ
                     EKQSKAKKKKKGVVPGGGLKATMKDDLADYGGYEGGYVQDYEDFM"
     regulatory      2397..2402
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif3j2"
                     /gene_synonym="eIF3 p35; Eif3j-2; eIF3j-B; Gm9781"
                     /note="hexamer: ATTAAA"
     polyA_site      2419
                     /gene="Eif3j2"
                     /gene_synonym="eIF3 p35; Eif3j-2; eIF3j-B; Gm9781"
                     /note="major polyA site"
ORIGIN      
        1 cgggccaacg agagccagcc cagtgactca cctctgccgc gctaactctt cgcagctctt
       61 cccatcacac acgctcaccc ccggttcgag atggcggcgg cggcggcggc ggcggcggca
      121 gcggcggcgg gggactcaga ctcttgggac gcggacacgt tctctatgga ggacccggtg
      181 cggaaggtcg cgggcggcgg cacggccggc ggggaccgct gggaaggcga ggacgaggac
      241 gaggacgtga aggataactg ggatgatgat gatgatgaaa ataaagagga agcagaagtc
      301 aaaccagaag taaaaatttc agagaagaaa aaaatagcag aaaagataaa agagaaagaa
      361 cggcagcaga agaaaaggca agaagaaatt aaaaagaggt tagaagaacc tgaagaatct
      421 aaagtactaa cacctgaaga gcaattagca gataaactcc ggctaaagaa attacaggaa
      481 gagtcagacc ttgaattagc aaaagaaact tttggtgtta ataataccgt ttatggaata
      541 gatgctatga acccatcttc aagagatgac ttcacagagt ttggaaagtt actaaaagat
      601 aaaattacac aatatgaaaa atcactatat tatgccagtt ttttggaagc cttagttcgg
      661 gatgtctgta tttcattgga aattgatgac ttgaaaaaga ttaccaactc attgactgtg
      721 ctctgcagtg aaaaacagaa gcaagaaaag caaagcaaag ccaaaaagaa gaagaaaggc
      781 gtggttcctg gagggggatt aaaggccacc atgaaagacg acctggcaga ttatggtgga
      841 tatgaaggag gctatgtaca agactatgaa gacttcatgt gacactttac cttctgctgt
      901 cttctttctt tgcccacaat cccttcaaca tgtagcacaa cctcctttcc tttcagttct
      961 gccaaatgct acaatcagaa gtgcagtatc tttgtgctgg ttacttaacc ccttgacact
     1021 caggtgctaa tgtgcaaatg agggaacttg gatcttgttg ccaaggggtt aaaattggga
     1081 acctcagttg ctactaaatc atagtttaaa aacaaaacaa acctaataat gttgtcattg
     1141 ttgctatccg attccatagc agcagtcact aaattggaaa caaaggttgc aacatgacaa
     1201 aaaaaaaaag tgtagtattt accagcacca ttcagtaata cagccttaac cgtacctcct
     1261 tgaactactt cataacttgt cgagaaaagc agtttgcagc aagggcatgt gggatgcacc
     1321 tagtattaaa attgctttgt cttaaaattg aggtgaggat attaaaaacg tgtgaagaag
     1381 actgcttatc tcagagtgaa gataactgtg gctgaaaagt actagtttga tacttaagat
     1441 tttaatgacc aaaaccctcc gacttggaag ctgaagaagg taaacttctc cattattaca
     1501 gtgcaagtgg tggactctcc agtgcattgc ctgtctagtt atttatcagc ctgtttctat
     1561 tgatggagga cttcatatgg gggagggaac tctgtttctg tttgcctgat tcaagtgtct
     1621 gagaaacaaa tgttctaggc tgcagtggga aaactttgaa cagggttttg gcgtttcctt
     1681 ttctttataa aacgtgctca gcaaactgca ccagttacct acagtttggt aaattgttat
     1741 gttaacaatt atgacatctg cagtgtttta taaagcaact aatttaataa aatcactatt
     1801 gtgaggactt aaattttgtg ttatatccca agagatagtt gagagtacag aatgccactc
     1861 atgggtgggg gtctctactc actaaagcta atcaatgctt gatgtagtca cagctttgaa
     1921 tgtttgtgtc ttcaacagtt acagagcctt cctactctta attattttgt tgtttagatg
     1981 ctaaggctca attaagtacc taggactatt tatttgtagt aatggagcct gttactaagt
     2041 ttattgctgt aagcataaat tggattacat cttaaataat ttacccaaac ttgtgtaccc
     2101 ctcaccccag gttttcacaa tcagaacaaa aaatgttttt gatttctctt ccataggcaa
     2161 taggaatctc aaagctctgt agactactaa gtggagaaca ggaccatcta aatgacatga
     2221 attagtagga ggtgtgacta cacagcaata actccagtaa atactgttga aggtagacaa
     2281 gggctaagat ttcctcagca gtaataatga cactgaaata aaaactattt tattatagaa
     2341 agttcagttt ctaactcatg aaaatgtatc acgtgttcct taactgtgta aataagatta
     2401 aattgctttg aaactggaa
//
