LOCUS       NM_144545               2434 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus eukaryotic translation initiation factor 3, subunit J1
            (Eif3j1), mRNA.
ACCESSION   NM_144545
VERSION     NM_144545.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Xu,T.R., Lu,R.F., Romano,D., Pitt,A., Houslay,M.D., Milligan,G. and
            Kolch,W.
  TITLE     Eukaryotic translation initiation factor 3, subunit a, regulates
            the extracellular signal-regulated kinase pathway
  JOURNAL   Mol Cell Biol 32 (1), 88-95 (2012)
   PUBMED   22025682
  REMARK    GeneRIF: eIF-3-alpha interferes with Ras-induced focus formation in
            NIH 3T3 cells.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK148004.1, AK161038.1 and CJ207683.1.
            
            On Aug 9, 2013 this sequence version replaced NM_144545.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK154934.1, AK161038.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                AK148004.1         4-46
            44-2410             AK161038.1         2-2368
            2411-2434           CJ207683.1         378-401
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 60.49 cM"
     gene            1..2434
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="eukaryotic translation initiation factor 3, subunit
                     J1"
                     /db_xref="GeneID:78655"
                     /db_xref="MGI:MGI:1925905"
     exon            1..145
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            146..249
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            250..304
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            305..396
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            397..511
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            512..673
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            674..747
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     exon            748..2413
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1779..1784
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="hexamer: AATAAA"
     polyA_site      1806
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="major polyA site"
     regulatory      2310..2315
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="hexamer: AATAAA"
     polyA_site      2334
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="major polyA site"
     regulatory      2390..2395
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="hexamer: ATTAAA"
     polyA_site      2412
                     /gene="Eif3j1"
                     /gene_synonym="1810016I04Rik; 2700079K05Rik;
                     eIF-3-alpha-A; eIF-3-alpha-B; eIF3-alpha; eIF3-p35; Eif3j;
                     Eif3j-1; Eif3j-2; eIF3j-A; eIF3j-B; Eif3j2; Eif3s1"
                     /note="major polyA site"
ORIGIN      
        1 gcgcgggcca acgagagcca gcccagtgac tcacctctgc cgcgctaact cttcgcagct
       61 cttcccatcg cacacgctca cccccggttc gagatggcgg cggcggcggc ggcggcagcg
      121 gcggcggggg actcagactc ttgggacgcg gacacgttct ctatggagga cccggtgcgg
      181 aaggtcgcgg gcggcggcac ggccggcggg gaccgctggg aaggcgagga cgaggacgag
      241 gacgtgaagg ataactggga tgatgatgat gatgaaaata aagaggaagc agaagtcaaa
      301 ccagaagtaa aaatttcaga gaagaaaaaa atagcagaaa agataaaaga gaaagaacgg
      361 cagcagaaga aaaggcaaga agaaattaaa aagaggttag aagaacctga agaatctaaa
      421 gtactaacac ctgaagagca attagcagat aaactccggc taaagaaatt acaggaagag
      481 tcagaccttg aattagcaaa agaaactttt ggtgttaata ataccgttta tggaatagat
      541 gctatgaacc catcttcaag agatgacttc acagagtttg gaaagttact aaaagataaa
      601 attacacaat atgaaaaatc actatattat gccagttttt tggaagcctt agttcgggat
      661 gtctgtattt cattggaaat tgatgacttg aaaaagatta ccaactcatt gactgtgctc
      721 tgcagtgaaa aacagaagca agaaaagcaa agcaaagcca aaaagaagaa gaaaggcgtg
      781 gttcctggag ggggattaaa ggccaccatg aaagacgacc tggcagatta tggtggatat
      841 gaaggaggct atgtacaaga ctatgaagac ttcatgtgac actttacctt ctgctgtctt
      901 ctttctttgc ccacaatccc ttcaacatgt agcacaacct cctttccttt cagttctgcc
      961 aaatgctaca atcagaagtg cagtatcttt gtgctggtta cttaacccct tgacactcag
     1021 gtgctaatgt gcaaatgagg gaacttggat cttgttgcca aggggttaaa attgggaacc
     1081 tcagttgcta ctaaatcata gtttaaaaac aaaacaaacc taataatgtt gtcattgttg
     1141 ctatccgatt ccatagcagc agtcactaaa ttggaaacaa aggttgcaac atgacaaaaa
     1201 aagtgtagta tttaccagca ccattcagta atacagcctt aaccgtacct ccttgaacta
     1261 cttcataact tgtcgagaaa agcagtttgc agcaagggca tgtgggatgc acctagtatt
     1321 aaaattgctt tgtcttaaaa ttgaggtgag gatattaaaa acgtgtgaag aagactgctt
     1381 atctcagagt gaagataact gtggctgaaa agtactagtt tgatacttaa gattttaatg
     1441 accaaaaccc tccgacttgg aagctgaaga aggtaaactt ctccattatt acagtgcaag
     1501 tggtggactc tccagtgcat tgcctgtcta gttatttatc agcctgtttc tattgatgga
     1561 ggacttcata tgtgggaggg aacactgttt ctgtttgcct gattcaagtg tctgagaaac
     1621 aaatgttcta ggctgcagtg ggaaaacttt gaacagggtt ttggcgtttc cttttcttta
     1681 taaaacgtgc tcagcaaact gcaccagtta cctacagttt ggtaaattgt tatgttaaca
     1741 attatgacat ctgcagtgtt ttataaagca actaatttaa taaaatcact attgtgagga
     1801 cttaaatttt gtgttatatc ccaagagata gttgagagta cagaatgcca ctcatgggtg
     1861 ggggtctcta ctcactaaag ctaatcaatg cttgatgtag tcacagcttt gaatgtttgt
     1921 gtcttcaaca gttacagagc cttcctactc ttaattattt tgttgtttag atgctaaggc
     1981 tcaattaagt acctaggact atttatttgt agtaatggag cctgttacta agtttattgc
     2041 tgtaagcata aattggatta catcttaaat aatttaccca aacttgtgta cccctcaccc
     2101 caggttttca caatcagaac aaaaaatgtt tttgatttct cttccatagg caataggaat
     2161 ctcaaagctc tgtagactac taagtggaga acaggaccat ctaaatgaca tgaattagta
     2221 ggaggtgtga ctacacagca ataactccag taaatactgt tgaaggcaga caagggctaa
     2281 gatttcctca gcagtaataa tgacactgaa ataaaaacta ttttattata gaaagttcag
     2341 tttctaactc atgaaaatgt atcacgtgtt ccttaactgt gtaaataaga ttaaattgct
     2401 ttgaaactgg aacaaaaaaa aaaaaaaaaa aaaa
//
