LOCUS       NM_025437               4865 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus eukaryotic translation initiation factor 1A, X-linked
            (Eif1ax), mRNA.
ACCESSION   NM_025437 XM_486845
VERSION     NM_025437.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4865)
  AUTHORS   Mattebo,A., Sen,T., Jassinskaja,M., Pimkova,K., Prieto
            Gonzalez-Albo,I., Alattar,A.G., Ramakrishnan,R., Lang,S., Jaras,M.,
            Hansson,J., Soneji,S., Singbrant,S., van den Akker,E. and
            Flygare,J.
  TITLE     Yippee like 4 (Ypel4) is essential for normal mouse red blood cell
            membrane integrity
  JOURNAL   Sci Rep 11 (1), 15898 (2021)
   PUBMED   34354145
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4865)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4865)
  AUTHORS   Zurkirchen,L., Varum,S., Giger,S., Klug,A., Hausel,J., Bossart,R.,
            Zemke,M., Cantu,C., Atak,Z.K., Zamboni,N., Basler,K. and Sommer,L.
  TITLE     Yin Yang 1 sustains biosynthetic demands during brain development
            in a stage-specific manner
  JOURNAL   Nat Commun 10 (1), 2192 (2019)
   PUBMED   31097699
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4865)
  AUTHORS   Varum,S., Baggiolini,A., Zurkirchen,L., Atak,Z.K., Cantu,C.,
            Marzorati,E., Bossart,R., Wouters,J., Hausel,J., Tuncer,E.,
            Zingg,D., Veen,D., John,N., Balz,M., Levesque,M.P., Basler,K.,
            Aerts,S., Zamboni,N., Dummer,R. and Sommer,L.
  TITLE     Yin Yang 1 Orchestrates a Metabolic Program Required for Both
            Neural Crest Development and Melanoma Formation
  JOURNAL   Cell Stem Cell 24 (4), 637-653 (2019)
   PUBMED   30951662
REFERENCE   5  (bases 1 to 4865)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ141723.1, AK166852.1 and AL808146.3.
            
            On Jan 13, 2018 this sequence version replaced NM_025437.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134827.1, AK134969.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                CJ141723.1         2-18
            18-943              AK166852.1         2-927
            944-4865            AL808146.3         140417-144338
FEATURES             Location/Qualifiers
     source          1..4865
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 73.41 cM"
     gene            1..4865
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="eukaryotic translation initiation factor 1A,
                     X-linked"
                     /db_xref="GeneID:66235"
                     /db_xref="MGI:MGI:1913485"
     exon            1..238
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     CDS             223..657
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="eukaryotic translation initiation factor 1A,
                     Y-linked; eukaryotic translation initiation factor 4C;
                     eIF1A X isoform"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 1A,
                     X-chromosomal"
                     /protein_id="NP_079713.2"
                     /db_xref="CCDS:CCDS41192.1"
                     /db_xref="GeneID:66235"
                     /db_xref="MGI:MGI:1913485"
                     /translation="MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGN
                     GRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARS
                     LKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI"
     exon            239..322
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     exon            323..426
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     exon            427..477
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     exon            478..559
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     exon            560..651
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     exon            652..4865
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /inference="alignment:Splign:2.1.0"
     regulatory      918..923
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="hexamer: AATAAA"
     polyA_site      948
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="major polyA site"
     regulatory      3227..3232
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="hexamer: AATAAA"
     polyA_site      3247
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
     regulatory      4841..4846
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
                     /note="hexamer: AATAAA"
     polyA_site      4863
                     /gene="Eif1ax"
                     /gene_synonym="1500010B24Rik; eIF-4C; Eif1ay"
ORIGIN      
        1 ggggagaagc cccgcccgct gccgcgacgc catttgccac tgccgagcgt gggcacggga
       61 ggctctcgca agcacgggtg accagcctct cctgagcacg cttcccgacc tcccgcacgg
      121 tcttcgtggc gcgcacttct cggcgttgcc cgtcggagtc accgcagttc ctgccgccag
      181 cctgagtgcg gtcccacacg ctgccagcca gtctttgcgg ccatgcccaa gaataaagga
      241 aaaggaggca aaaaccggcg tagaggcaaa aatgagaatg aatctgaaaa gcgagagctt
      301 gtgttcaagg aggatgggca agaatatgct caagtaatca aaatgttggg aaacggacga
      361 ttagaagcca tgtgttttga tggtgtaaag agactgtgcc acatcagagg gaaattgaga
      421 aaaaaggttt ggataaatac ctcagatatc atattggtgg ggctacgaga ttaccaggac
      481 aacaaagccg atgtcatttt aaaatacaac gcagatgaag ctagaagtct caaggcctat
      541 ggcgagcttc cagagcatgc taaaatcaat gaaactgata catttggtcc tggagatgat
      601 gatgaaattc agtttgatga cattggggat gatgatgaag acatcgatga tatctaaagc
      661 gaactcaaca ttttacattc cagtcttccg gaagattgtc cttcaagttt ggaatctggc
      721 catagacctc aaagaaaaat tttcactatc atcttaattg taatttgttg aggcagattt
      781 gatattacag tctttgaaaa actgttaact gatacgctaa gtccactttg ttgattcgat
      841 tcaatggtcc ttaagactgt ttaagacaaa aagcctttcc tactttgacc ccttccagta
      901 agtaaatggg tgttttgaat aaaccatttg ccttgtgctc agtataaagt atgactaagc
      961 cctgcctttg catagctgtt gactggacag tctttgtgta tattccagtt gcccagagat
     1021 tttgatacac atggaggcag aaatctgtgt tttgtttttg ttctattttg agacagagtc
     1081 taactttgta tctgaggcta gcttggagtt cactgtagtg ctggtggacc tcagacttgc
     1141 tgggatcctc ctgagtgcta agggcatatg tatgtaccac catacctggc agaaatctat
     1201 ttaaaggcaa aaatgatagg tctgcgtttc atatttaagt atgtggctat ttttatactg
     1261 gttttgatac catgtacatt ttttttcatg attttatttt gcagtcatcg gcttactgga
     1321 ggaggaaagg catttccaaa atggtttttt gggtttggag gtttgtttgt gggcggggag
     1381 tgttgagaca gggttacttt gtgtggccct agcgataatg aaactcactc tgtacaccag
     1441 gctggcctca agctcaaaga cgttttcctg cctctgcctc ccaagtgctg ggattaaagg
     1501 tgtgcgccgc agctaccacc gacaccagca cggcccgtct ccaaaatagt tttcgaaact
     1561 ggtttttcat gccggttttg aattaaggtc agtagttgca aaaattgaac attaggtgat
     1621 gctcaattgt cttaacatag aaatactatt ttaattgttg agatggttgc ttgtctcaac
     1681 tagtgtgaat aggaaatttc ccaaacaaag aaaagattgt tttaatcatg tgcgtagaat
     1741 atttttaccc aacagaaaga tggtattgga gtattgcttt tttttttcag gagtcttact
     1801 cacataagct acaattttga gtactttata aacacacaaa acataggcaa gtgaaaatat
     1861 aaattttaca gagcaaaagt ataaattaat gctttttcgg gctttcccta aacttgagag
     1921 gaaatgaggg gataacaaac ttatgcctga cataatggca tggcctgtga ccctgcgcag
     1981 aagggcaggg caggaggatc aggagttctg catgttttca gaaactggtt tttaatgcca
     2041 attttgaaga aatgtctcaa aaacaacgtt cataaaaaga tgttttctta tttctgaatc
     2101 aaagagctat agccgaaaaa gtagtgtgtc gcagaggatc ttgtcgtctg gttttacatt
     2161 aggaacaagt ttaccgtggg gagggtccag gggaatccca ttttctttct actgggaaat
     2221 taggtttgct cttatttagg agttctaaga ctaggagctg agctagtcgg aactcactag
     2281 acatgctgaa atcatttggg tttcaaacca agatccatcc tgcagcatgc ggaccttgta
     2341 ttttgctagc agccagaaag cttttcgttc atgaaaactg acacacaaag gaatgcgcct
     2401 ttcacgtggt ttcacaaaca aggagatctg ctctaattat ttcctaacta tgacttcatc
     2461 tcctcggttt gcacactctg cctcaaaagc cgaggtacca taaaaacatt gggaaagaca
     2521 cagtggtgca gtgtatattt cttcttctgt ggagttcctc cgtgtttatc ttggcagact
     2581 gcatctgaga acaaggctgc caatagcctc gcagcgtttg ctgagcaatt gtcttcctta
     2641 gtaattagac ctctgtacct taaaagtgtt tcaccagctg gatgtagcgt acccctggga
     2701 tcccagctct gggggatttg tcattgaata gtagctaggg ctacataagg cactggctca
     2761 aaaacaacaa tagaaaccat ttttgctcaa tttgcatata tatagattac tctatgagca
     2821 gtgctttgct tctgcttagg tgatacagct cgagtcttga ttttctattt tctgtaacaa
     2881 acaagatttg aaatgatttt agaaattaga caatgacccc acttcctatc tcttctggtg
     2941 gttttctctt ttcttcttct tcttccctaa agcagcatta ttgagtgctt ttgcatcctg
     3001 gaagatctgg agacattgat ttaaaatagt tgaatgcagt tgtattaata cagtatacaa
     3061 atgctacctg gaagagttct ttgatgtgta tttggtgtgg gaatcataca gtgtcacaaa
     3121 tccagtttta gttctaataa ggaatggaaa tagtctttaa ggaaattatt tggtttcttt
     3181 atttttggtt cctatagtat agctccaagc agcacctagg aagaataata aaatgtttga
     3241 aatcgaagaa taatggtttt ttgttttgtg gaggggagga ttgttttggt tttgagggtg
     3301 gagttttttt tttgttgttg ttgttttttg ttttggtttg gttttatttt tttgagacag
     3361 gatctcatgt accgccaggc tggccttaaa ataccaatag ctaactaagg ccagcctcaa
     3421 attctgatcc tctgccttta cctcccaaat gctggggttt caagtgtgta caagctcacc
     3481 caactagact aatacctctt cctattaaga tgatgtaaca agttagtcct aatcaatctc
     3541 ataggctcat gccaagttct tggtgtgatt ccccaacacc cataaacaga gcagtttgat
     3601 agggttgtat ttttcctgta gtttattcca gttgagcatg aacaatgtgt gttgctaaag
     3661 tggcggtgta accacaccaa gtgtctgtaa aatgacttgc cagcatttag ccatttgcct
     3721 gttgaatctt tcttaaccat cttttaaggg aaccacttta ggagattaca agtattcatg
     3781 atagggattt tttttatact ttattggaga gtagccattg gtttactcat cccatgtatg
     3841 gaattgtggc tgtaagttgt cgcttaaaaa attccgtgac ttgtaacgtt acttaatctg
     3901 gattatctta gtaataaact ttaaattact atgctaaaca acatcttgaa tagaaattgt
     3961 cagtgttgac tacagagtaa ctgaataatc atataggtag tagcatgttt taaatagcta
     4021 gatttctact cattttgtat tctgttcaaa tataatgatg ttcactataa actgtagctt
     4081 ttcaggtaaa gtatcagaat gaagacagtt cataaagatt aaaaaggatt tgtatctata
     4141 tgatattcat cctgctcagt aaagataagt ttcatttata tactgatagg actcccttgg
     4201 acttttgcac actaccttca agtttacagt ttaccttaaa ccatcatttt ccatccttgt
     4261 tcagaaaaag aacaaaatct gaattaagtt gtattccaag tgtatggaaa cactagactg
     4321 agcaattgag agactgtact ggacacctac caggttcttg agagacagac agtgtgctag
     4381 aaatagaaaa gaatatgggc actgggccca gaattattgg agggctaata acagacattt
     4441 gtatgcatga cacacttggc atctactttt cacatgggaa tccaggactg taagaagatg
     4501 catgtctcct gtattcccta tgtaacatat cttttgcttg cagtcttttt cattcctatg
     4561 atagaaggga catgtagaat atatatttgt attatgtgga cactacaatg gctgccacac
     4621 catctttatt taattcagca ggtaggagtc tcaaaagttg cttgaagcta ttttatagaa
     4681 tcccaactgc tctatatttc ttcagagaaa gtttatagtc actaataaag ctggctatgg
     4741 tgacgtgtcg tttttatgct ttaacgagtt cttttgccat aggttctttt tccatcatgt
     4801 ggaacaatgt aaagaaatca gatgcaaagt acaattagaa aataaaacac aaaaacaacc
     4861 caacg
//
