LOCUS       NM_001177574            1822 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus eukaryotic translation initiation factor 1A domain
            containing 4 (Eif1ad4), mRNA.
ACCESSION   NM_001177574 XM_001472074 XM_003946449
VERSION     NM_001177574.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC211878.4.
            
            On or before Dec 1, 2013 this sequence version replaced
            XM_003946449.1, XM_001472074.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AA422828.1, SRR17253011.230412.1
                                           [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-159               AC211878.4         136891-137049
            160-1822            AC211878.4         139117-140779
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 42.04 cM"
     gene            1..1822
                     /gene="Eif1ad4"
                     /gene_synonym="100039052; Gm2022"
                     /note="eukaryotic translation initiation factor 1A domain
                     containing 4"
                     /db_xref="GeneID:100039052"
                     /db_xref="MGI:MGI:3780191"
     exon            1..159
                     /gene="Eif1ad4"
                     /gene_synonym="100039052; Gm2022"
                     /inference="alignment:Splign:2.1.0"
     exon            160..1822
                     /gene="Eif1ad4"
                     /gene_synonym="100039052; Gm2022"
                     /inference="alignment:Splign:2.1.0"
     CDS             470..904
                     /gene="Eif1ad4"
                     /gene_synonym="100039052; Gm2022"
                     /note="predicted pseudogene 2022"
                     /codon_start=1
                     /product="Eif1a-like"
                     /protein_id="NP_001171045.1"
                     /db_xref="GeneID:100039052"
                     /db_xref="MGI:MGI:3780191"
                     /translation="MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGC
                     GWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARS
                     LKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI"
ORIGIN      
        1 ttgggagaca aaggaagagg acatcccacc taggccaatc tgttctgtag aaagagttcc
       61 aggacagcct cgcgtacaca gaaaaaccct atcccagaaa gaaagaatca tcattctatc
      121 ggctcttagt cttccttcaa agaagatggt actcaccagg tcaatgcatt aactgcaaag
      181 gtaatggagt cctgctgtat tttgtcacta ctggggagac tacaacttcc tgagcaccag
      241 gccagaagct gaagtactat tttgtaacta tcagaagcca ggactctgga acatattgtg
      301 gcttgtggac cttctatact tatatcagtt gctgtcagat ctaccactgt tcaatacttc
      361 ctggcaccca tcctaagact gtagtagctc ttggaactga gacacagcta ctgtcagcca
      421 ctgtctgcca ggagtccctc acctgactcc tgtggttgcc ttttccatca tgccaaagaa
      481 taaaggcaaa ggaggcaaaa acaggcgcag aggtaaaaat gaaaatgaat ctgagaaaag
      541 agagttggtg tttaaagaat atgggcaaga gtatgctcag gtgaccaaaa tgctgggatg
      601 tggatggttg gaagcaatgt gttttgatgg tgtaaggagg ctgtgccaca taagagggaa
      661 gttgagaaaa aaggtttgga taaatacctc agacattata ttgattggtc taagagacta
      721 tcaagataac aaagctgatg taatcttaaa gtacaatcaa gatgaagcaa gaagtctgaa
      781 ggcctatgga gaacttccag aacatgccaa aatcaatgaa atggacacat ttggtcctgg
      841 ggatgatgat gaaatcgtgt ttgatgatat tggagaggat gatgaagaca ttgatgacat
      901 ctaacctgac ataagcatgc aaccttccaa gttctttgaa gattgctcaa cacaattggc
      961 atcttgacat tcagctgtta aataaaactt catttggcat acgtgtgtat tgctaatgca
     1021 aactgatata ttttatgttt tgaagtattc tatttctttg aaaacctaag atgttgagtt
     1081 atctatctta agtgacaagt taacactttg tgcttatggg tataattgaa cttagggcag
     1141 agcagtgtgc actgttaagg gactgccatt ccatttgtga cctttcattt gtagcccttg
     1201 ttgtataccc tcacttgatc ctttaacttg tttccaccca taagttgttg catcatacag
     1261 tgcagttttt aagttagatg ggtagcaatt ttgagtttta agaattaggc attgcagaaa
     1321 ttaaatgctt agaggagatg atcattttct tgtgtttaaa gatataatag ttgacaatgt
     1381 ttagatagaa tcttgtaagg catactcaaa aaaagaatga aaataaaaaa gagaagtaaa
     1441 tctcttctga ttcttgcata gagaaatttt caaagcaggt agttgttaag agcacataga
     1501 gtagtgttta ctttctaaac taggtccttg cgttaagcca tttttaagaa gttagcttct
     1561 gtactgaggc tttggaaaat gaattattgt gtattgagta aagttaatta cataattgta
     1621 aaagctttgt tttccttaac ctacgcttag gttaatggaa aaggagccag agcttaatga
     1681 aaatgatgtt actgttttct gaatggagga gtccagaaac agagacacat taaaaccatg
     1741 ttggtatata tacatttttt ctttttaata tgttcattat atctctggtg tataatgaaa
     1801 ataaatgatt acatgatttc tg
//
