LOCUS       XM_006513524            7839 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus early endosome antigen 1 (Eea1), transcript
            variant X3, mRNA.
ACCESSION   XM_006513524
VERSION     XM_006513524.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006513524.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7839
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..7839
                     /gene="Eea1"
                     /gene_synonym="A430109M19Rik; B230358H09Rik; ZFYVE2"
                     /note="early endosome antigen 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 54 ESTs, 690 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:216238"
                     /db_xref="MGI:MGI:2442192"
     CDS             282..4532
                     /gene="Eea1"
                     /gene_synonym="A430109M19Rik; B230358H09Rik; ZFYVE2"
                     /codon_start=1
                     /product="early endosome antigen 1 isoform X3"
                     /protein_id="XP_006513587.1"
                     /db_xref="GeneID:216238"
                     /db_xref="MGI:MGI:2442192"
                     /translation="MFRRILQRTPGRVGSQGSDLDSSATPINTVDVNNESSSEGFICP
                     QCMKSLGSADELFKHYQAVHDAGNDSGHGGEAGLALTRDDITLLRQEVQDLQASLKEE
                     KWYSEELKKELEKYQGLQQQEAKSDGLVTDSSAELQALEQQLEEAQTENFNIKQMKDL
                     FEQKAAQLATEIADIKSKYDEEKSLRAAAEQKVTHLTEDLNKQTTVIQDLKTELLQRP
                     GIEDVAVLKKELVQVQTLMDNMTLERERESEKLKDECKKLQSEHAHLEMLKFEATINQ
                     LRSELAKGPQEVAVYVQEIQKLKGSINELTQKNQNLTEKLQKKDLDYTHLEEKHNEES
                     ASRKTLQASLHQRDLDCQQLQARLTASESSLQRAQGELSEKAEAAQKLREELREVEST
                     RQHLKVEVKQLQQQREEKEQHGLQLQGEVSQLHCKLLETERQLGEAHGRLKEQRQLSS
                     EKLMEKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLEKSKQQHQEQQALQQSATAK
                     LREAQNDLEQVLRQIGDKDQKIQNLEALLQKGKESVSLLEKEREDLYAKIQAGEGETA
                     VLNQLQEKNHALQQQLTQLTEKLKNQSESHKQAEENLHDQVQEQKAHLRAAQDRVLSL
                     ETSVSELSSQLNESKEKVSQLDIQIKAKTELLLSAEAAKAAQRADLQNHLDTAQHALQ
                     DKQQELNKVSVQLDQLTAKFQEKQEHCIQLESHLKDHKEKHLSLEQKVEDLEGHIKKL
                     EADALEVKASKEQALQSLQQQRQLSTDLELRNAELSRELQEQEEVVSCTKLDLQNKSE
                     ILENIKQTLTKKEEENVVLKQEFEKLSQDSKTQHKELGDRMQAAVTELTAVKAQKDAL
                     LAELSTTKEKLSKVSDSLKNSKSEFEKENQKGKAAVLDLEKACKELKHQLQVQAESAL
                     KEQEDLKKSLEKEKETSQQLKIELNSVKGEVSQAQNTLKQKEKDEQQLQGTINQLKQS
                     AEQKKKQIEALQGEVKNAVSQKTVLENKLQQQSSQAAQELAAEKGKLSALQSNYEKCQ
                     ADLKQLQSDLYGKESELLATRQDLKSVEEKLTLAQEDLISNRNQIGNQNKSIQELQAA
                     KASLEQDSAKKEALLKEQSKALEDAQREKSVKEKELVAEKSKLAEMEEIKCRQEKEIT
                     KLNEELKSHKQESIKEITNLKDAKQLLIQQKLELQGRVDSLKAALEQEKESQQLMREQ
                     VKKEEEKRKEEFSEKEAKLHSEIKEKEAGMKKHEENEAKLTMQVTTLNENLGTVKKEW
                     QSSQRRVSELEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKALE
                     LQRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMSCGKCFSVTVRRHH
                     CRQCGNIFCAECSTKNALTPSSKKPVRVCDACFNDLQG"
ORIGIN      
        1 cgggcgggcg ggcccgccca gctgtcagtt acgggggcgg cccggcaggc gggcgctcgc
       61 tggctccctc ctcgctggct cgtgctcgtg agcctctcgc cgcctgtggg gaagtcgggg
      121 ccgccaaagc cgcgtccacc gccgcctctt ccccgccctc ctccctcccg gctcggctgc
      181 cggcccctcg cgccctccag tcgtgagtaa cccgcataag ggcgcggaga gtccccgcgg
      241 cggcggcggc ggtgacggcg gcggcggcgg ccggccaaac catgtttcga aggatcttgc
      301 agaggactcc tgggcgagtt ggctctcaag gttctgattt agattcatca gcaactccta
      361 taaatacggt ggatgtcaat aatgaaagtt cttcagaggg tttcatatgt ccccagtgta
      421 tgaaatccct tggctctgct gatgagcttt tcaagcacta tcaggccgtt catgatgctg
      481 gtaatgactc gggtcatggt ggagaggccg gtcttgcttt gacacgagat gacataacac
      541 tactcagaca agaggtccaa gacctacagg cctcacttaa ggaagaaaaa tggtactcag
      601 aagaattaaa gaaagaatta gaaaaatatc aagggctaca gcagcaagag gctaaatctg
      661 atggattggt gactgattcg tcagcagagc tacaggcttt agagcaacaa ttagaagaag
      721 cacaaacaga gaattttaat attaagcaaa tgaaagatct gtttgaacag aaagcagccc
      781 aacttgctac tgaaattgca gatataaagt caaaatatga tgaagaaaag agtctccgag
      841 cagctgctga acaaaaagtg acacatttga cagaagactt aaacaaacag acaactgtaa
      901 ttcaagatct gaaaactgaa ctgcttcaga gacctggtat agaagatgtt gctgtactaa
      961 agaaagaact ggtccaagtt caaacactaa tggataacat gactttggaa cgtgagagag
     1021 aatctgaaaa acttaaagat gaatgcaaaa agttacaatc agagcatgct catttggaga
     1081 tgcttaaatt tgaggctaca ataaaccagc taaggagtga acttgccaaa ggcccccaag
     1141 aagttgcagt atatgtgcag gaaatacaaa aacttaaagg ttcaattaat gaattaacac
     1201 aaaaaaacca gaacttgact gaaaaattgc agaagaaaga cctagactac acccacttag
     1261 aggagaagca caatgaagag tcagcaagtc ggaagactct ccaggcatcc ctccaccagc
     1321 gggacctgga ttgccagcag cttcaggcaa ggctaactgc atctgaaagc tcactccaga
     1381 gggcccaggg agaactcagt gaaaaggcag aggctgctca gaagctcaga gaagaactgc
     1441 gggaagtaga gagcacgcgc cagcatctca aggtggaggt gaagcagctg cagcagcagc
     1501 gggaagagaa ggaacagcac gggctgcagc tgcaggggga agtcagccag ttacactgca
     1561 aacttctgga gaccgagcgc caactggggg aagctcacgg caggctgaag gaacagcggc
     1621 agctttccag cgagaagctg atggaaaagg agcagcaggt ggctgaccta cagctcaagc
     1681 tctctcgtct ggaggagcag ttgaaggaaa aggtaacaaa ttccactgaa ttacaacatc
     1741 agttagaaaa atcaaagcaa cagcatcaag aacagcaagc tctacagcaa agtgctacag
     1801 ccaaactccg agaagctcag aatgatttgg agcaagtgtt acgtcagatt ggagataagg
     1861 accaaaagat ccagaacctt gaagccttgc tgcagaaggg taaagaaagc gtttccttac
     1921 tagaaaagga aagagaagat ctttatgcaa aaatccaggc cggtgaagga gagactgctg
     1981 ttcttaacca gttacaagag aaaaatcatg cactgcagca gcagctaact caactgacgg
     2041 agaagctgaa gaatcagtcg gaaagccata aacaagccga ggagaacttg catgaccagg
     2101 tacaggaaca gaaggcacat cttcgagctg cacaagaccg tgttctttct ctggaaacca
     2161 gtgtcagtga actaagcagt cagttaaatg aaagcaagga gaaggtctcg cagcttgaca
     2221 tacagattaa agccaaaact gaattattac tatcagcaga agcagcaaaa gctgctcaga
     2281 gagctgatct tcagaatcac ttggacacag ctcaacatgc gttacaggat aaacaacagg
     2341 agttaaataa ggtcagtgtg cagttggatc agctcactgc aaagtttcag gagaagcagg
     2401 agcattgcat tcagctggaa agccacctta aggatcacaa ggagaagcac ctctctttag
     2461 aacaaaaagt tgaagactta gaaggccaca ttaagaaact agaagctgat gctcttgaag
     2521 ttaaagccag caaggaacag gctttgcaga gtctacagca gcagaggcag ctgagcacag
     2581 acctggagtt gagaaatgca gagctgagta gagagctcca ggagcaggag gaagtagtat
     2641 cttgtacaaa actggatcta cagaataaat ctgaaatcct tgaaaatatc aaacaaaccc
     2701 tcaccaagaa agaagaagaa aatgtcgtct tgaaacaaga atttgaaaag ttaagtcaag
     2761 attcaaagac acagcacaag gagctggggg acaggatgca agctgcggtc acagagctga
     2821 cagcagtgaa ggcacagaag gacgcactcc tggccgagct ttctacaaca aaagaaaaac
     2881 tgtcaaaagt ttcggattct ttaaaaaact ccaaaagtga atttgagaaa gaaaatcaga
     2941 aaggaaaagc tgctgtatta gatttggaaa aagcttgtaa agaattaaag catcagcttc
     3001 aagtacaggc agagagtgcc ctgaaggagc aggaggacct gaaaaagtca ctcgagaaag
     3061 agaaagagac ttctcagcag ttgaagatag aactcaattc agtcaaggga gaagtctcac
     3121 aggctcaaaa tacattaaag caaaaggaga aagacgaaca acagcttcag gggaccataa
     3181 atcagctaaa gcaatcagct gaacaaaaga aaaaacaaat tgaagcgctt caaggagagg
     3241 ttaaaaatgc tgtttcacaa aagacagtgc tggagaataa gctgcagcag cagtcatcac
     3301 aggcagccca ggagcttgca gcagagaaag gaaaactgtc agcgctgcag agcaactacg
     3361 agaagtgcca ggcggacctg aaacagctgc agtccgacct ctatggcaaa gagtctgaac
     3421 ttctagccac gaggcaagac cttaagtctg tagaagagaa gctcactctg gcacaagaag
     3481 acttgatttc aaacagaaat caaattggaa accaaaataa atcaattcaa gaattgcaag
     3541 ccgccaaagc tagtttggag caggactcag caaagaaaga ggcgctgcta aaggagcaga
     3601 gtaaggcact tgaggatgct cagagagaaa agtcagtgaa ggaaaaagaa ctagtagctg
     3661 aaaagtctaa attggcagag atggaggaaa ttaaatgtag acaagaaaaa gaaatcacaa
     3721 aactcaatga ggagctcaag tcgcacaaac aagaaagcat aaaggaaata acaaatctca
     3781 aggatgccaa gcaacttttg attcaacaga aattagaact tcaaggcaga gtggactcac
     3841 tgaaggcagc tcttgagcag gagaaggaga gtcagcagct gatgcgagag caggtgaaga
     3901 aggaggaaga gaagcggaag gaagagtttt ctgagaagga agcgaagctg cattctgaaa
     3961 taaaagaaaa ggaagcggga atgaagaaac acgaagaaaa cgaggctaag cttactatgc
     4021 aggtcacaac attaaatgaa aacttgggta ctgtgaagaa ggagtggcag tctagtcaac
     4081 ggagagtcag tgagcttgag aagcaaacgg atgacttacg gggagaaatt gctgtcttag
     4141 aagcaactgt tcagaataat caagacgaaa gaagagcact cctagagagg tgtcttaaag
     4201 gcgaaggtga aatagaaaag cttcagacca aagccctaga gctgcagaga aagctggata
     4261 acacaactgc ggccgtgcag gagctgggca gggagaacca gtctctccag atcaaacaca
     4321 cacaagcatt gaacagaaag tgggcggaag acaacgaagt gcagaactgc atgtcctgtg
     4381 ggaagtgctt ctccgtcacc gtgcggcggc atcactgccg acagtgtggg aatatcttct
     4441 gtgccgagtg ctcaaccaaa aatgccttaa ctccttcttc gaagaagcct gttcgtgtct
     4501 gtgatgcatg cttcaatgat ttgcaaggat aacgggttat cacaacttca gagtagtatc
     4561 acactaacgt tagactttta ataaattgat ttggactctg gttgcatact aggccaaatt
     4621 ggaattcgta tattttggaa tgttaccagt atcaagtaaa actcttctat ttttgtgaga
     4681 cttgggttca tctttaatta ctttttccat taaaccccta aaacagcttt catgccaagg
     4741 tcagaattag ccaatgaaat gtaaataatc tttggacaga aaatagcaat gtattttttt
     4801 aaatataatt taattattca caaatgatga ctacaattcc ttagcttctt cctctcagag
     4861 taaatgtaca gaatgtctgg acggctccta tcatttgttg cggttttgtt gcacaacgac
     4921 acagtgattc tattctcttg gtggagtcat gcacaggaat gtaacacttt ctgttttttc
     4981 ctctataggt ctgtagctca attatgttgt tgtgttatac atattacttg agtgttctaa
     5041 atgcagtgta tgctaaatga tgtgttaacc atgagtttgc gtgtgggttt tgtttgggca
     5101 gtattgatta aattctcaag tagatttgat aaactcctat gtaaaattta tggtacttct
     5161 gggattgtat ttatgaaatg agttaatttg catttctcta tcttatttct gacacccaca
     5221 cactgtcccc taaaacattg tatgtaactt ccctttctga gctggagggt gagtagtaga
     5281 gccgtgtggt ggcttggtct tggtttttgc tggtggaaag ttttctgaag tgatctcaca
     5341 gcgcagcctc actccctcaa tttcagcatc tttaggaagt ttgctttcca gccttcataa
     5401 atgtagctca gcctcagtgc agttgtgctt gcagtagggc ctttgtaaag ataggaacgg
     5461 acactgctaa tgtcgcatct gtacctgtga agactaagtc aagtggtaag gaaatagtag
     5521 ccttcttctc ggtacttcct ctaaccaaac aggaaagact aaatacagcg acagaaagct
     5581 ggcgccatgt ctctgatgag gggcccatat taacttggga tcttttaact ttgaaaaaat
     5641 agtgctatga gattacacaa ccgctacaga gcagagtccg tacagcccca cctccatata
     5701 cctaggagct cctaaatgat gataaaaagg aaaacactgg ctgctgctcg accccttaaa
     5761 agtcatttgt ctaccaacca ataaacttgt tcttagaaag catcagaaga ctgaacttgc
     5821 cacatactag tttttaaatt atctttctgt agaagaaata taaagttaca catcgaatca
     5881 ttacagtcat ttagtgataa tagcagagaa agataagagc taatatttca tttgcaagaa
     5941 agaatttata ttacacactg ctgtcaggag tatgctggag tcttcatgtt tttatgacat
     6001 acttacaaca ttacacaaac aagagactga catgtaattt ttaatcattt agcaaagtta
     6061 agccctgctt tcagtaatga ctaaggacac tgattacatc ccaggacttg gataagtata
     6121 tccttgagct tatatactga agtgatacaa tggctctata ttaaaaataa tagttgggta
     6181 atatagactg agctgtttat gctttttata taattgtgaa tcctttccgg tagtcctaat
     6241 tctacctttt tggtttttgc atataaacac tttgactatg ttaaaaatgc agatattcac
     6301 agcactactt tgtgaaaatt ctggattaaa atatttgttc atttcatcct ttaattgaag
     6361 acactggaga ctttcttttt gtgcatcctc acttcacaaa aaaatagaag tggctacaaa
     6421 gaaaacccgt atgtgtttat ggtaggtttc ctgttccccc aataatctta tgccacaggt
     6481 cccaaataat gtccctatca cacgccactt tactgatgac acaatgaagc caaacaaacc
     6541 accgttcctc ttaactatta ccaattcaga atggactgga cacagaaatg taagattttt
     6601 tttttctcgt ttaatgaaaa agtcttgtga attctttttg gctgtacact tagctgtttg
     6661 ctagtagtat tgtactgtca gtgggctgga gctgccgcat acagagtccc aggtcttggc
     6721 tatcatgcac agttggcatc aggtgttggc aaactgcaca ccccagcaca gaaatgggag
     6781 ctgaaatgag gttgtgctgg gttgtgcaca gtaaactgta tgtagagagt gtctgtagta
     6841 ggcagcaggg gaagctgctg atacaggact tacttgtttt gaagaaagga aagaaggaga
     6901 caaacacaca aacctcagtg cagtgtacaa ataaacattt tgttcaacta cctcttaaag
     6961 tggagttagc tagtgtaatg gtttccttat agtaatagtc aatagcaact gccaaattta
     7021 cgttcccatg cctcttaaaa ggtcttcatg attactttct atagctttga ggtccttcct
     7081 tgtggctact tttttactct tgcatttgca taagatatta ccctctaagt ggaaggcaaa
     7141 tgacagccgt atattttgat atttgtgacc tgtttaatta tagcagtttt tttaatgcac
     7201 tttggctata aaaactatgg gtaacttgat ctataagatt taaatgtgcc atcaatttag
     7261 tattcctaga cataagcttg atgaatgatc ttctataatt ataatgtgcc acatttttct
     7321 gtgtcttaat tgccctttgc ctgaatttca atgatcaaaa tgttattgtt gcacatgtga
     7381 atactgtgta taaaacttcc taaatttatg taaagttgta taatatagaa taaagaaatc
     7441 ccactgtgtt ctctctgtaa gaagtaatga acttactgta acatggtcca gccacaagtc
     7501 tgacatttta tgctctctga agtggatcat atatccatag cctctgtaca tacttttgca
     7561 tgagtatttt ctctgttagt ttttgggttc attatttata ttgtgtttac tacttgtgat
     7621 catgtagttg tgccttattt ttgtgaaaga gtttagctca gtaaatactg taatttctaa
     7681 tcccagtgat tagaaagtta ccgattataa ataaataact gataaattat aagacagcat
     7741 ttaaatctgt ataaagaaca atggaaggat ccttactgaa ttgccacttc tgttttttaa
     7801 tatgttaaag atgatattaa agaccatttc tttctagta
//
