LOCUS       NM_001177416             963 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus epididymal protein 13 (Eddm13), transcript variant 1,
            mRNA.
ACCESSION   NM_001177416 XM_892523 XM_912420
VERSION     NM_001177416.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Noda,T., Sakurai,N., Nozawa,K., Kobayashi,S., Devlin,D.J.,
            Matzuk,M.M. and Ikawa,M.
  TITLE     Nine genes abundantly expressed in the epididymis are not essential
            for male fecundity in mice
  JOURNAL   Andrology 7 (5), 644-653 (2019)
   PUBMED   30927342
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
REFERENCE   3  (bases 1 to 963)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC148989.4, AK079003.1 and BX635876.1.
            
            On or before Apr 10, 2010 this sequence version replaced
            XM_912420.2, XM_892523.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY226991.1, AK079003.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-175               AC148989.4         80033-80207         c
            176-315             AK079003.1         1-140
            316-316             AC148989.4         66081-66081         c
            317-725             AK079003.1         141-549
            726-963             BX635876.1         1-238               c
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.62 cM"
     gene            1..963
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /note="epididymal protein 13"
                     /db_xref="GeneID:627821"
                     /db_xref="MGI:MGI:3643580"
     exon            1..183
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            184..201
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            202..207
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            208..216
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            217..225
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            226..252
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            253..309
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            310..327
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            328..333
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            334..342
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            343..351
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            352..378
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            379..405
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            406..527
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            528..565
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     exon            566..959
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /inference="alignment:Splign:2.1.0"
     regulatory      932..937
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /note="hexamer: AATAAA"
     polyA_site      959
                     /gene="Eddm13"
                     /gene_synonym="EG627821; Epp13; Gm6792"
                     /note="major polyA site"
ORIGIN      
        1 aacttttgtc ttgagagtac aggagaacag tgagtgacca gagtcccgtt gaccctggaa
       61 ggagaacatc agtcgcccta tccaggcccc cccccaccat gtgcagacta gagccatttc
      121 tgaagaggtc cctggtggtc ctccttttcc tgggcctggc agaggcctgc gttcctcgtg
      181 aagtcgcaat ggaagagaaa atcaaaatgc tgaaaggaat cttggggttg atgggcagac
      241 tgtccccaga tggtttcaga caaaacatca tatcctcctc caagacgcct cccctggtaa
      301 ccactccaga caagtcagaa gaagaaatga aaatattgaa acggatcctt ggtctgctga
      361 gcctccaagt actgaatgaa gaaacaagta actgcaaaga agaagtgaag cctcctccag
      421 ccaccaccac agtcagggga cttgtgagga ccagtggatg gaactttctg aggtgtgcct
      481 acatggtgat tacgttcttc ttcgtgtcct acaataaagg agactggtgt tactgccgct
      541 actgtaaccc ggacctggat ctgagagacg acccctgctg ttccttccag tgaagccgct
      601 ctgctctgtt ttgctcaacc ctcacaagcc ctccgtctcc agagcatttc acttcccaag
      661 gaagctcttc gaactctggc ttatcaacta gcagagtatg agtgtgtcca gaggctcagc
      721 aggaagccgt ctggggaccg tgccctgtga caatagccag tagagcagcc gagtgagcct
      781 ttgtaaggct ttccccaaca ccttctcttc tgggccattt tcaacctttc tttattgtgc
      841 actaattaat tgctaaatgc ttgtttctta cattcacaga acagcaaatg acacagggtg
      901 gaggggcgct aagaatcatt tataattttc aaataaaaaa acccttgatt tttgattgaa
      961 aaa
//
