LOCUS       XM_030242090            4090 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus early B cell factor 3 (Ebf3), transcript
            variant X14, mRNA.
ACCESSION   XM_030242090
VERSION     XM_030242090.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242090.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..4090
                     /gene="Ebf3"
                     /gene_synonym="3110018A08Rik; mKIAA4201; O/E-2"
                     /note="early B cell factor 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 5 ESTs, 134 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:13593"
                     /db_xref="MGI:MGI:894289"
     CDS             494..2257
                     /gene="Ebf3"
                     /gene_synonym="3110018A08Rik; mKIAA4201; O/E-2"
                     /codon_start=1
                     /product="transcription factor COE3 isoform X9"
                     /protein_id="XP_030097950.1"
                     /db_xref="GeneID:13593"
                     /db_xref="MGI:MGI:894289"
                     /translation="MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQ
                     SGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNE
                     KTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIM
                     CSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTT
                     VNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIG
                     DNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRF
                     VYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEII
                     LKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVG
                     YSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS
                     PYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPP
                     SCTSANGNGLQAMSGLVVPPM"
ORIGIN      
        1 tgggaacgtg gggaggcgcg gagcagcaca cctccagccc gccgcaggcg acgctggcac
       61 ctcgcggccc cggcgcccgc cacgcccgtc ggagtagagg ctcggcggct caggcgggcc
      121 gcgccagaag cgggcgatcc cgcagtgtcc tgcagccgcg gacgccgcct ggctaggatg
      181 acaccacgtt gagcgcgcct gcaaacaaca acaacaacaa gcgccgccgc ggccaccgcg
      241 tccaccgcgc cctgctcctc cgaagcgtcg cgtcgccacc ggtgcagccc gcccgcgtcc
      301 ccggccgtcc gcagcgcccg gccgccggtg tatgcggcgc ctgcccggga cgggctgaag
      361 ccggcggcgg gccgcaccgc aggcgccgag cagggccagg gcggccaggg cagcctcctg
      421 ccgccgagcc ccgagcgccg ccgaccgcgg acgcgctttc ggccgggagt cgcggccgcc
      481 gccagcagtg ttcatgtttg ggattcagga gaatattccg cgcgggggga cgaccatgaa
      541 ggaggagccg ctgggcagcg gcatgaaccc ggtgcgctcg tggatgcaca cggcaggcgt
      601 ggtggacgcc aacacggccg cccagagcgg cgtggggctg gcgcgggcgc acttcgagaa
      661 gcagcctcct tccaacctcc ggaaatccaa tttcttccac ttcgtgctgg cgctctacga
      721 caggcagggg cagccggtgg agatcgaaag gaccgctttt gtggactttg tggagaaaga
      781 gaaagagccg aacaacgaga aaaccaacaa cggcattcac tacaagctgc agctactgta
      841 cagcaatggc gtcagaacag agcaagatct gtatgtccgc ctcatagatt caatgaccaa
      901 acaggccatc gtgtatgaag gccaggacaa gaatccggag atgtgccgcg tgctgctgac
      961 ccacgagatc atgtgcagcc ggtgctgtga caagaagagt tgtggcaata gaaacgagac
     1021 accctcagac cctgtaatca ttgacagatt ctttctaaag ttcttcctca agtgcaatca
     1081 gaactgcctg aagaatgcgg gcaaccctcg ggacatgcgg aggttccagg tcgttgtatc
     1141 gacaacagtc aacgtggacg gccacgtgct ggccgtgtct gacaacatgt ttgtgcacaa
     1201 caattccaaa cacgggaggc gggcccgccg cctagacccg tcagaagcca ctccgtgtat
     1261 caaggctatc agccccagtg aaggctggac cacggggggt gccactgtga tcataatcgg
     1321 ggacaacttc tttgacggtc tacaagttgt gttcggaact atgttggtgt ggagtgagct
     1381 gataaccccc cacgccatcc gagtgcagac gccgcctcga cacatccctg gagttgttga
     1441 agtgaccctc tcctacaagt ctaagcagtt ctgcaaaggc gctcctggac gctttgtcta
     1501 cactgccctt aatgagccaa ccatagatta cggcttccag aggttgcaga aagtgatacc
     1561 cagacatcca ggtgaccccg aaaggttacc caaggaagtg ttactgaaga gggcagcaga
     1621 ccttgtggaa gccttgtatg ggatgcctca caataaccag gagatcatcc tgaagagagc
     1681 ggccgacatt gctgaggcgt tgtacagcgt tccccgcaat cacaaccaga tccccaccct
     1741 gggcaacacc ccagcacaca ctggcatgat gggtgtgaac tccttcagca gccagctagc
     1801 cgttaatgtg tcagagacct cacaagccaa tgaccaagtc ggctacagtc gcaatacaag
     1861 cagcgtgtcc ccgcgaggct acgtccccag cagtactccc cagcagtcca attacaacac
     1921 agtcagcact agcatgaatg gatatggaag tggcgccatg gccaatctag gggtccctgg
     1981 ctcgcctgga tttcttaatg gctcctccgc taactctccc tacggcatag tgccgtccag
     2041 ccccaccatg gcagcctctt cggtcaccct cccttcaaac tgtagcagca cacacggcat
     2101 tttctcattc tcacctgcca atgtcatctc cgcagtgaaa cagaagagcg cttttgcgcc
     2161 cgtggtccgg ccccaagcct cgcctcctcc ttcctgcacc agcgccaacg ggaacggact
     2221 gcaagctatg tctgggctgg tagtcccgcc catgtgaggg gctctgtttg ccttcgcagc
     2281 acccagcatc caaggacgga cttcagggga cacgtgtagt gtgttaagat gtgctgatgg
     2341 aaacactatc ttcaaaacta aaaatcagcc acagttgaat gctacaaaag acatttaaag
     2401 attttattta aactgttaag aatcaagccg cgaacaagcc cactccttca tgaacaattc
     2461 cactttattg actgaactct tctcatacct tcacatttct cagtcctgaa gattaaggaa
     2521 acaaagcacc gcctattttg tataaagttt ctgattccgt cttggctgtc tagtgcgtgc
     2581 tatctgtgtg gggagaagct tcgtgaatat gcaccgtttt gatgcccatg caacagtgag
     2641 gaagaaaaac cctcgagaca ttttttctgt actcatattt agattcacaa tggttgtgta
     2701 tctctataat gtgaaatatt tttttgtggt gaataaaagg gggccaagga ggtatgagcc
     2761 attaactgga acagacgagg atatgactag gtgaatttgg ggtggcaggg agggagggag
     2821 ggtttatcat tgcttaactt catcttaatg aaatgaaact ttgtaactta ttgtagttag
     2881 aaattgtaac tttgatatcg aatctcttgc cttcaacaag cacactgaca gagaaaaaaa
     2941 aatatgctac tgtctgttgg ttccaatatt ctcccaccta gagcttcctg ttaaagcaag
     3001 tgcgatcagc aacatttttc aactttcgcg cactgtaaac ctattgcatt cttaggctac
     3061 tgtgaggtct atgtttcttg tacctgaaat tgtcctttgg actcctagac ccttcttccc
     3121 cgatgtgttt tgtatgtggt tataaaattg tagacttttg tgattttgcc aaagttgtag
     3181 ctaaatattt atacacttgt cttgaatttt tttcagatcc acttaaaata tttagaaaaa
     3241 cgagttttat tccttatggg tcttataggg gataaaatgc tcttcttcca tgcgacactt
     3301 cctttcccat gaacacttgc agttgctaag ggactttatt ttgtaacata ttaattataa
     3361 atattgtatt tatctttgaa attttgtaca ttgctttccc tgccttcttt tttcacgtct
     3421 gttttggtgt ttgatccctg cccagtgttg tcgcacaggg gaagggcaga taccaagacc
     3481 tgtctgttgg atctgttttg ttgagataaa ctgatgtcct tacatttcat ttgtacctaa
     3541 accatttgct atcgtttaga ctttccaccc cccacccctt ttttttatgt tgaggaaaag
     3601 tcaaattcat tgtttatttt tatattattt ttaagttatc tgaacaaata cttttgaaaa
     3661 gaaaagtttg ttgtatagtc aaaagaaaac ggtgtcagcg gccgagacaa attctggtag
     3721 gttctgtgca tgtgaagcgg ccgtgaaggg gccacatcgt ccgggctgtg tccttattta
     3781 atttttaatt tttaattttt tcgtagaatg taaaaaaaaa aaagtcattt tagctgccac
     3841 ctatgacttt gccacatagc tgaactgtgt ttactggaaa aattcagagg cctaaagttt
     3901 aaaataaaat ttacttccga cgttttaatt acaaatgttt gccacattaa cttctctgat
     3961 gccttaaaag tggacttctt tgaagaactt ctgtgctatt ttatcacagg ctcataccac
     4021 aattgttaat atctggagat ggatgatgaa cacacacaca cacacacaca cacacacaca
     4081 cacacacaca
//
