LOCUS       NM_001177525            1428 bp    mRNA    linear   ROD 23-FEB-2022
DEFINITION  Mus musculus expressed sequence EU599041 (EU599041), mRNA.
ACCESSION   NM_001177525
VERSION     NM_001177525.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Kunarso G, Wong KY, Stanton LW and Lipovich L.
  TITLE     Detailed characterization of the mouse embryonic stem cell
            transcriptome reveals novel genes and intergenic splicing
            associated with pluripotency
  JOURNAL   BMC Genomics 9, 155 (2008)
   PUBMED   18400104
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC123045.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU599042.1, SRR14995044.392887.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               AC123045.2         53386-53494
            110-236             AC123045.2         62922-63048
            237-297             AC123045.2         63248-63308
            298-1428            AC123045.2         65059-66189
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 28.25 cM"
     gene            1..1428
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /note="expressed sequence EU599041"
                     /db_xref="GeneID:100170401"
                     /db_xref="MGI:MGI:3796554"
     exon            1..109
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /inference="alignment:Splign:2.1.0"
     CDS             107..919
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /codon_start=1
                     /product="uncharacterized protein LOC100170401"
                     /protein_id="NP_001170996.1"
                     /db_xref="GeneID:100170401"
                     /db_xref="MGI:MGI:3796554"
                     /translation="MDALTFDDVHVHFTREEWSLLDPSQKRLYKDVMLENYRNLTTIG
                     YNWKDHNIEEHSQNDRRYGRHKITPAGEKPYEYTQWDKAFKYHSHLQKLERNQTGDKN
                     SEVFQHSKVLTCQSTLQRNKRTDTREKPYKCNECDKAFLKLKYLRLHERIYSGKKPYE
                     CNQCGKAFLHPSYLRMHERTHTGEKPYQCNQCGKAFTRRSHLQSHKVVHTGERPYICN
                     QCNKAYPRKSCLRKHERTHTGEKPYKCDQCGKAFTQSSHLKTHKVIHTGGRL"
     exon            110..236
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /inference="alignment:Splign:2.1.0"
     exon            237..297
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /inference="alignment:Splign:2.1.0"
     exon            298..1428
                     /gene="EU599041"
                     /gene_synonym="TU7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tagttccatg ctgtagctga ggatgctgga gtggtttgtg tgtcctgctt tgtatgctac
       61 tgctgggtgc tgtgagggga attcaggcga gctctgacct cgcgacatgg atgcattgac
      121 ctttgatgat gtgcatgtac acttcactcg ggaggagtgg tccttgctgg atccatctca
      181 gaagagactt tacaaagatg tcatgctgga gaactacagg aatctcacca ctataggcta
      241 caattggaaa gatcataaca ttgaagaaca ttctcaaaat gatagaagat acggaaggca
      301 caaaatcact cctgctggag agaaacccta tgaatataca caatgggata aagccttcaa
      361 atatcacagt catcttcaaa agcttgaaag aaaccaaact ggagacaaaa actcggaagt
      421 ctttcaacat agtaaagtgc ttacatgtca aagtactctc caaagaaata aaagaacaga
      481 tactagagag aaaccctaca aatgtaatga atgtgataaa gcctttttaa agctcaagta
      541 tcttcgacta catgaaagaa tatattctgg gaagaaaccc tatgaatgta atcaatgtgg
      601 taaagccttt ttacatccca gctatcttcg aatgcatgaa agaacacata ctggagagaa
      661 accttaccaa tgtaatcaat gtggcaaagc ctttacacga aggagtcatc ttcaaagcca
      721 taaagtagta catactggag agagacccta catatgtaat cagtgtaata aagcctatcc
      781 acgcaagagt tgtctccgaa aacatgaaag aacacatact ggagagaaac cttacaaatg
      841 tgatcagtgt ggtaaggcct ttacacaaag cagtcatctt aaaacccata aagtaataca
      901 tactggaggg agactctaaa tatgtaatca gtgtgatgaa gcctattcac acccgagtca
      961 tcttccaaaa catgaaagaa cacatactgg agagaaacct tataaataaa tcagtgtcat
     1021 aagtcattta tatctcacag tcatcatcaa gctgatgaaa gaatttatac tggatagaaa
     1081 ccctacaaat gtaatgaatg tgataaagcc ttttcacagc ccaggtatct tcgaatacat
     1141 gaaagaacac atacgggaga gaaaccttac aaatgttatc agtgtgataa agcatttcca
     1201 caaggcaata atctcaaagt acatacaagg aggcatattg gagatatccc tatgaatgaa
     1261 atcaatgtgg taaagccttt gtatatgact aatcttttgg gatccataaa agaacagata
     1321 atggagactg gagagaaaca ttaccaacat aatcaatgtg gtaaagcctt tgcagaaagc
     1381 agtcatcttc aaacccataa agtactacat actggagtgt aacctccc
//
