LOCUS       NM_001254745             993 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA E030030I06 gene (E030030I06Rik), transcript
            variant 2, mRNA.
ACCESSION   NM_001254745
VERSION     NM_001254745.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX515464.1 and AK053193.1.
            
            Transcript Variant: This variant (2) has an alternate 3' exon,
            compared to variant 1. The resulting isoform (2) has a shorter and
            distinct C-terminus, compared to isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK053193.1, SRR7345562.1627789.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-447               BX515464.1         30-476
            448-993             AK053193.1         1-546
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 9.88 cM"
     gene            1..993
                     /gene="E030030I06Rik"
                     /note="RIKEN cDNA E030030I06 gene"
                     /db_xref="GeneID:319887"
                     /db_xref="MGI:MGI:2442914"
     exon            1..782
                     /gene="E030030I06Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             259..876
                     /gene="E030030I06Rik"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="uncharacterized protein LOC319887 isoform 2"
                     /protein_id="NP_001241674.1"
                     /db_xref="CCDS:CCDS56697.1"
                     /db_xref="GeneID:319887"
                     /db_xref="MGI:MGI:2442914"
                     /translation="MRGAGGTRWKSPGQSDHTFSLSSGLLLLGAEIVGRLRNRCGGGR
                     GGISGGGGRARRLSWAEFRGCARLAPAGEKVGPSSPGAPEACKSESTHPGSSVPHRQP
                     AASKEKDSLGGADQSTSAWQRSAKAPDLKNGGRFLIPKRQRVQTSEEDLRLSTVREVA
                     VLRHLETLEQPYVVSLKPVCSGFSVREHWGGACRPIILPLPLPAS"
     exon            783..993
                     /gene="E030030I06Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacaacgata taggtataaa tattgagccg tgacactgat gcgcccggcg cccccctccc
       61 ccgcactccg ggcacactct gggctgctcc gcacgccccc tcttgtcccg ctgcgtcccg
      121 ctcggcgctc atccccaagg ggccccagca acctcttcct ttcaaagaca gcacgagccg
      181 tgctggggaa gaaaagtaac ttggtttttc tccgagaaac ctggccggat taggcagcca
      241 gggcgagtag aggggagaat gaggggagct ggtggaaccc gatggaagtc tcccgggcag
      301 tctgatcaca ctttctcctt gtcctccggt ctcctcctcc taggtgcaga gattgtgggc
      361 agactacgta atcgctgcgg agggggaaga ggagggatct ccggcggcgg cggcagggcg
      421 cggagactca gctgggcgga gtttcgcggc tgcgcccggc ttgcgcccgc gggcgagaag
      481 gtcggtccgt ctagcccggg ggcccccgag gcgtgtaagt cagagagtac gcaccccggt
      541 tcctctgtgc cgcaccgaca gcctgcagcc agcaaggaga aggacagcct gggtggcgcc
      601 gatcagagta cgagtgcttg gcagagatcg gcgaaggccc ccgacctgaa gaatggcggc
      661 cgcttcctga ttccgaagcg ccagcgagta cagaccagtg aggaggactt gcggctctcc
      721 accgtccgtg aggtggcggt gctgaggcac ctggagacct tagagcaacc ctacgtggtc
      781 agcctgaaac ctgtttgctc aggtttcagt gttagagagc attggggcgg agcttgccgc
      841 cctatcatcc tgccactccc actgcctgcg tcctagctgt tccggagcct tcgcgtgttc
      901 acctgcaacc ttactccacg atgatttggc gggaatcggg ccccttcccc tgcttcataa
      961 ctgagtgtcg gaattagtaa aatcgaacct tga
//
