LOCUS       NM_175030                982 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus dynein light chain Tctex-type 4 (Dynlt4), mRNA.
ACCESSION   NM_175030
VERSION     NM_175030.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 982)
  AUTHORS   Korrodi-Gregorio,L., Vieira,S.I., Esteves,S.L., Silva,J.V.,
            Freitas,M.J., Brauns,A.K., Luers,G., Abrantes,J., Esteves,P.J., da
            Cruz E Silva,O.A., Fardilha,M. and da Cruz E Silva,E.F.
  TITLE     TCTEX1D4, a novel protein phosphatase 1 interactor: connecting the
            phosphatase to the microtubule network
  JOURNAL   Biol Open 2 (5), 453-465 (2013)
   PUBMED   23789093
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 982)
  AUTHORS   Thuret,S., Bhatt,L., O'Leary,D.D. and Simon,H.H.
  TITLE     Identification and developmental analysis of genes expressed by
            dopaminergic neurons of the substantia nigra pars compacta
  JOURNAL   Mol Cell Neurosci 25 (3), 394-405 (2004)
   PUBMED   15033168
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK029345.1.
            
            On Apr 5, 2007 this sequence version replaced NM_175030.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029345.1, BB571979.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-982               AK029345.1         2-983
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 53.41 cM"
     gene            1..982
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /note="dynein light chain Tctex-type 4"
                     /db_xref="GeneID:242646"
                     /db_xref="MGI:MGI:3045358"
     exon            1..46
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /inference="alignment:Splign:2.1.0"
     exon            47..153
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /inference="alignment:Splign:2.1.0"
     exon            154..222
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /inference="alignment:Splign:2.1.0"
     exon            223..982
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /inference="alignment:Splign:2.1.0"
     CDS             234..893
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /note="tctex1 domain-containing protein 4; Tctex1 domain
                     containing 4"
                     /codon_start=1
                     /product="dynein light chain Tctex-type 4"
                     /protein_id="NP_778195.1"
                     /db_xref="CCDS:CCDS18528.1"
                     /db_xref="GeneID:242646"
                     /db_xref="MGI:MGI:3045358"
                     /translation="MACRTLPSRRQEEETTKDLALKLPPGKPGGHLPSIDETRPIGPG
                     PASRRGSLPGLHPSFSRRNSLAGPLVGPGGRRPSLGPVPPLGSRVSFSGLPLMLPRRM
                     APSYRLEPAPGEHWEAAGAQRALEAALTTQLNGVCYCGSEAGKLVQALCEQIHTRVRE
                     LNLPRYKLVCNVVLGPREGQGVHVVSRALWDAVHDGLASATFTNPSLFAVATVHAVYW
                     E"
     regulatory      962..967
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /note="hexamer: AATAAA"
     polyA_site      981
                     /gene="Dynlt4"
                     /gene_synonym="4833401D15Rik; Tctex1d4"
                     /note="major polyA site"
ORIGIN      
        1 agtgaagact gtggggccag cagagcttgg aggccaaagg ctgcagatgc agccggtgga
       61 gagggagaaa agtcccaccg tacacagagc agggaagatg attaagttct ctacctctga
      121 ggctacagag agctgtggga gtgatggagt cggctcttaa ccggctctaa gcacctagta
      181 ggcacacagc cccaatctga cctacttgtt ccaaacgtac agcaggcagg tccatggctt
      241 gcaggaccct gccatccaga cgccaggaag aggagactac caaagacctg gctctgaaat
      301 taccaccagg gaaacctgga ggtcacctgc ccagcattga tgagacccga cctataggcc
      361 caggcccagc ctcccgtcgt ggctccctgc cgggcctaca cccatccttt tcgcgccgca
      421 actcactggc gggaccctta gtgggtcctg gaggtcgacg accatccctg ggcccagtgc
      481 cccctctagg ttcacgagtt agtttttctg ggctgcccct gatgcttccc cgtaggatgg
      541 caccctcata ccgcttagaa ccggcgcctg gggaacactg ggaagctgca ggtgcccagc
      601 gggccctgga ggcagcactg accacacagc tgaacggtgt gtgctactgc ggttctgagg
      661 cagggaaact ggtgcaggca ctatgtgaac agatacacac ccgcgtgagg gagctcaacc
      721 taccccgcta caaactcgtg tgcaacgtgg tgctggggcc acgcgaggga cagggtgtgc
      781 atgtggtcag ccgagcactc tgggatgcgg tgcacgatgg actggcctct gccaccttca
      841 ccaacccttc tctgtttgct gtggctaccg tccacgcggt ctactgggaa tgataaggcc
      901 ttcaagttct gaaaaaacgg tttattaccc caggaggagg cccccctggg gctcacatcc
      961 caataaataa atgtctgtta at
//
