LOCUS       NM_001166627             825 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus dynein light chain Tctex-type 1F (Dynlt1f), transcript
            variant 1, mRNA.
ACCESSION   NM_001166627 XM_001475451 XM_001475467 XM_001475492 XM_001475513
VERSION     NM_001166627.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Pfister,K.K., Fisher,E.M., Gibbons,I.R., Hays,T.S., Holzbaur,E.L.,
            McIntosh,J.R., Porter,M.E., Schroer,T.A., Vaughan,K.T.,
            Witman,G.B., King,S.M. and Vallee,R.B.
  TITLE     Cytoplasmic dynein nomenclature
  JOURNAL   J Cell Biol 171 (3), 411-413 (2005)
   PUBMED   16260502
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Ha,H., Howard,C.A., Yeom,Y.I., Abe,K., Uehara,H., Artzt,K. and
            Bennett,D.
  TITLE     Several testis-expressed genes in the mouse t-complex have
            expression differences between wild-type and t-mutant mice
  JOURNAL   Dev Genet 12 (4), 318-332 (1991)
   PUBMED   1718647
REFERENCE   3  (bases 1 to 825)
  AUTHORS   Howard,C.A., Gummere,G.R., Lyon,M.F., Bennett,D. and Artzt,K.
  TITLE     Genetic and molecular analysis of the proximal region of the mouse
            t-complex using new molecular probes and partial t-haplotypes
  JOURNAL   Genetics 126 (4), 1103-1114 (1990)
   PUBMED   2076813
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY250333.1 and BQ175560.1.
            
            On or before Oct 31, 2009 this sequence version replaced
            XM_001475451.1, XM_001475467.1, XM_001475513.1, XM_001475492.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU945868.1, BU939341.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02415136 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-435               BY250333.1         1-435
            436-825             BQ175560.1         1-390               c
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 4.11 cM"
     gene            1..825
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /note="dynein light chain Tctex-type 1F"
                     /db_xref="GeneID:100040531"
                     /db_xref="MGI:MGI:3780996"
     exon            1..166
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /inference="alignment:Splign:2.1.0"
     CDS             140..481
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /note="isoform 1 is encoded by transcript variant 1;
                     dynein light chain Tctex-type 1E; Dynein light chain
                     Tctex-type 1; Activator of G-protein signaling 2;
                     T-complex testis-specific protein 1"
                     /codon_start=1
                     /product="dynein light chain Tctex-type 1F isoform 1"
                     /protein_id="NP_001160099.1"
                     /db_xref="CCDS:CCDS57043.1"
                     /db_xref="GeneID:100040531"
                     /db_xref="MGI:MGI:3780996"
                     /translation="MEDFQASEETAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTT
                     NVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTM
                     YCIVSTFGLSI"
     exon            167..208
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /inference="alignment:Splign:2.1.0"
     exon            209..332
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /inference="alignment:Splign:2.1.0"
     exon            333..410
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /inference="alignment:Splign:2.1.0"
     exon            411..810
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      597
                     /gene="Dynlt1f"
                     /gene_synonym="100040531; 100040631; AGS2; Dynlt1;
                     Dynlt1e; Tctel1; Tctex-1; Tctex1"
                     /note="major polyA site"
ORIGIN      
        1 tttggtggag ggaccgggcc ctagagcgta ggtagttatt ggtagtggtc agggtccccc
       61 gcgcgggggc ggagtgggcg tgttctggcc gcgcctgcgc agtccactct actcggcggg
      121 cgaaggagac gcgttaaaga tggaagactt ccaggcctcc gaggagactg catttgttgt
      181 tgatgaagtg agcagcattg taaaggaggc tatagaaagc gccatcggtg gtaatgccta
      241 ccagcacagc aaagtcaacc agtggaccac taatgtccta gaacagactt tgagccaact
      301 caccaaactg gggagaccat ttaaatacat tgtgacctgt gtgatcatgc agaagaacgg
      361 tgctgggtta cactccgcaa gttcctgctt ctgggacagc tccacagacg gaagctgcac
      421 agtccgatgg gagaacaaga ccatgtactg catcgtcagt accttcggac tgtccatctg
      481 accaccttgc cagcctcagc ctcgtggtcc cagcatttcc agtccatctt aactaccagc
      541 tatgttgggc aaaccccttc ctcctaagtt gttctgtggc actctcaaaa aaccaaatga
      601 ctccccagtc acaggaacca catgacttca gccagattag cagccacctg tcatctgaga
      661 caggcagtac cacttgtctt aactgtcttc tccaaggtgc taaaaactca agtctgctgg
      721 tggaaacagc tctactttct gaaatgattc agatacacta actttccata ctttattctt
      781 tcttagaata ataaattatt caaaattaaa aaaaaaaaaa aaaaa
//
