LOCUS       XM_006518411            3425 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus dorsal root ganglia homeobox (Drgx),
            transcript variant X2, mRNA.
ACCESSION   XM_006518411
VERSION     XM_006518411.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006518411.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..3425
                     /gene="Drgx"
                     /gene_synonym="Drg11; Prrxl1"
                     /note="dorsal root ganglia homeobox; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 7 ESTs, 27 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:107751"
                     /db_xref="MGI:MGI:2148204"
     CDS             665..1456
                     /gene="Drgx"
                     /gene_synonym="Drg11; Prrxl1"
                     /codon_start=1
                     /product="dorsal root ganglia homeobox protein isoform X2"
                     /protein_id="XP_006518474.1"
                     /db_xref="GeneID:107751"
                     /db_xref="MGI:MGI:2148204"
                     /translation="MFYFHCPPQLEGTAPFGNHSTGDFDDGFLRRKQRRNRTTFTLQQ
                     LEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGA
                     KEPMAEVTPPPVRNINSPPPGDQTRSKKEALEAQQSLGRTVGPTGPFFPSCLPGTLLN
                     TATYAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYGCQSNRTASVAALRMKAREHSE
                     AVLQSANLLPSTSSSPGPASKQAPPEGSQDKTSPTKEQSEGEKSV"
ORIGIN      
        1 gggtggggga tgatattggt agctgttgtt tttatcttcg tttaaaagaa aaaaagggaa
       61 aaacattcct gatgtttgct gagaagtgac ggattttttt ttttttttac accacgtggg
      121 ccatttgtaa ggcccaatag acctatccaa gttactcgct gtagacagcg ctggaaataa
      181 tcagattaag gccaattatg cgtgagatta taaaggcgag tgctgagcgg cggcgcgcgc
      241 tgtagacaga cagcaagaca tctggccact tccccagtca cttctctggt cctgcgggcg
      301 ccagcagcgc caagccccgc ccgccgccag ccgagccccg cgtgcggact agaggcgagc
      361 gcactccggc cttctcgccc gcctcccgca gaggtaggca gggttcccgt gctgctcccc
      421 cggctccctg cgctgggcct tgggacttca ccggcttttg gcccgagctg ctgcgcttgc
      481 agatggcctt gcgcgatcgc cggacccagc tgcggtggcc aagtgcaggg cttgtggttg
      541 ggacccctga gaaccaggag ccagactgtg cccagcttgc caggccggag ccacgcacag
      601 gcacaagtct gccaggccgc taccagccct ggtccagcca tcagggccca tccgaccgtc
      661 ggcgatgttt tatttccact gtccgccaca gctagagggc actgcgcctt ttgggaacca
      721 ctctacaggg gattttgatg atgggtttct tagaagaaaa cagcgcagaa atcgaacgac
      781 cttcactctt cagcagctgg aagctctgga ggcagtcttt gcccaaacac actacccaga
      841 tgtcttcacc agagaagagt tagccatgaa aataaacctc acagaagcca gagtgcaggt
      901 ttggttccag aaccgaagag ccaaatggag gaagacagag agaggggcct ctgaccagga
      961 gccaggggcc aaggaaccca tggcagaggt gacaccaccg ccagtgagga acatcaactc
     1021 tccaccccca ggggaccaga cccggagcaa gaaggaggcc ctggaggccc agcagagcct
     1081 gggacgcaca gtgggcccta ccgggccttt cttcccctcc tgcttgccag ggaccctcct
     1141 gaacacagcc acgtatgccc aggccctgtc ccatgtggca tctctgaaag ggggcccact
     1201 gtgctcttgc tgtgtcccag acccgatggg actctccttc ctccccactt atggctgcca
     1261 gagcaaccgc acggccagcg tggctgccct gcgcatgaag gcccgcgagc attcagaagc
     1321 tgtcctgcag tctgccaacc tcctgccatc caccagcagc agtcccggcc ctgcttccaa
     1381 gcaggcgcct ccagaaggca gccaggacaa gacctcccca accaaggaac agagcgaggg
     1441 agagaagagt gtatgagggt ccagaggacc cagccgggag ccctccccac ccctgcttct
     1501 ctcagcctca gccctgccat cctctgaacc acaaggagta gctgcctcct caaggacctg
     1561 gcaggggaag cgagacctgc agctggttga gagctggaga gtccctctag aattctgctg
     1621 gtaggctgtg ttgttctggc tttttctttg gtgacatttc ctgatggctc ttagtggctc
     1681 tggacactgc tctgtaatgc ggcccctgga tttttttgtc ttgttttgtt tgtttgtttg
     1741 tttgttttag gccaagcagt cttggagcaa agcagattag ttcttctcgc caaccttctt
     1801 gagctatctg agaaggtctt gtcaattcca ggggccatgg catggatcat tcctgaaaga
     1861 tgcccagaag tggcatctca tgacaggaaa tgagtcgctc ccacattgct taaaaccaca
     1921 gaactgatag gctatcaacc agttctcact ctcttcagtc aagactgtca acagcccctt
     1981 ttctcttgtt taaaggtatt agctgaggtt ttggttagga agtgacaaga tatggtcaca
     2041 gtggtcctga tcctagcagg ttcccctggc ccagtcagac aggttgtcag ttctgtggcc
     2101 cctgggagcg ggactgctat cctgatacta tgtgtgtgga gcaaaagtgg gttccctgca
     2161 attagagtgt ccacttgcag gccccgcctc tcttcagaag agtgatggga agttcactag
     2221 ttcagaacgt agctttatgg cccacaaaag gacaagagcc ccagaagtgg gaggaaatcc
     2281 ccaggaaggt ccctgaaata tgcccagagg agccgcctgt cttcatgtcc cctgtatgta
     2341 gagagggtga caagacagga aacccagtaa gatgactccg tgtggcggaa gaaaatgaaa
     2401 tccaaagggc caaatttcat agagatttct gcctcagtct agtgtggctg tgttcttcca
     2461 tgcagatggt gacctcggag agatcagagg gagatgtgca atagcgtgtg cccctctcct
     2521 ggcccggtcc tgcaagggtt gtggttgttg gtggcttttg gtgatgatgt ttccacacaa
     2581 acagccattg ctttcatgaa ggctgttatc gtttcagttc tgataatcga gaggccccgc
     2641 ttccaggcca tctgcctccc cttagctctt cagaagcgcc cctcccctgt aatactcctc
     2701 agtgtatcgt gcctcactta cggttatggc aatgcatctg atggaacaca ctgtctccat
     2761 aaaaaggaag aaaaaaaaaa aagaaaaaaa aagaaaaaag aaaaaagaaa aaaaaaaagc
     2821 caggtccttg ttcttgctgt attttgcttg ttgagtacaa agatgaagcg atttgccaaa
     2881 aagtggccaa gttgcttcca tttccctgta attatgaagg tttggttggg cgatgtatgc
     2941 tccagccctt atgcacacta actcttcaat ctaattgttt gattaaactc gtatttcctc
     3001 cagaaaggta cataaataag tgaactgttg ggcaaattaa gaatacttaa cagcattgca
     3061 tccgaaaagt agttatgctg attaaatttt gtgtccttga ggactttcag gaaattactt
     3121 ttgatcgtca ataacacaat taagtaaact acacacacat tagcatgaat aattgataag
     3181 aaattatgta ttaccacgaa gcactgattt aataattcat gacgcgacac tccagtgact
     3241 gtgcaaaact ggatcacatt gaaaagtctg cctgacgttc tggaaagaaa ggaaaaacag
     3301 cgagagccaa acctctgcag agatatctga gcacttagtt ctgatgtaca aagggcaaaa
     3361 gtaaccgatg catgatgtcg tttctgttcc tttaaacacc tgaataaatt tagactttaa
     3421 agacc
//
