LOCUS       NM_033606               3158 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus DEAQ RNA-dependent ATPase (Dqx1), mRNA.
ACCESSION   NM_033606
VERSION     NM_033606.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ji,W., Chen,F., Do,T., Do,A., Roe,B.A. and Meisler,M.H.
  TITLE     DQX1, an RNA-dependent ATPase homolog with a novel DEAQ box:
            expression pattern and genomic sequence comparison of the human and
            mouse genes
  JOURNAL   Mamm Genome 12 (6), 456-461 (2001)
   PUBMED   11353393
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC104324.21.
            
            On Nov 17, 2006 this sequence version replaced NM_033606.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: AF318278.1 [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-296               AC104324.21        94385-94680
            297-602             AC104324.21        94971-95276
            603-796             AC104324.21        95458-95651
            797-1184            AC104324.21        95980-96367
            1185-1418           AC104324.21        96709-96942
            1419-1518           AC104324.21        97032-97131
            1519-1677           AC104324.21        97238-97396
            1678-1869           AC104324.21        97477-97668
            1870-1989           AC104324.21        101065-101184
            1990-2180           AC104324.21        101335-101525
            2181-2371           AC104324.21        102631-102821
            2372-3158           AC104324.21        102974-103760
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 35.94 cM"
     gene            1..3158
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /note="DEAQ RNA-dependent ATPase"
                     /db_xref="GeneID:93838"
                     /db_xref="MGI:MGI:2136388"
     exon            1..296
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            297..602
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             375..2531
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /EC_number="3.6.4.12"
                     /note="DEAQ box polypeptide 1"
                     /codon_start=1
                     /product="ATP-dependent RNA helicase DQX1"
                     /protein_id="NP_291084.1"
                     /db_xref="CCDS:CCDS20268.1"
                     /db_xref="GeneID:93838"
                     /db_xref="MGI:MGI:2136388"
                     /translation="MASGLAEESELSPGESELAVNPFDGLPFSSCYYELLEQRRALPI
                     WAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQVTVTQPYP
                     LAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGA
                     WSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPI
                     VRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCC
                     ESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQTVYEDTDVSVRKIVVTHWLADFSFSLP
                     SIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKST
                     LELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLA
                     ALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPL
                     SAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAEL
                     VELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQL
                     SPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFLSNLPPS
                     ESRDLLNQLREGTAEPPAAATETSSPQEYGDGCVLQ"
     exon            603..796
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            797..1184
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1418
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1419..1518
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1677
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1678..1869
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1870..1989
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1990..2180
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2181..2371
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2372..3158
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2958..2963
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2968
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /note="major polyA site"
     regulatory      3134..3139
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3158
                     /gene="Dqx1"
                     /gene_synonym="2310066E11Rik"
ORIGIN      
        1 cactccaaaa ctacaagtcc cagaatgcat ttcatgacta tagtcatata ggctcagtta
       61 tacaagctca gggtggcatc aggaacctgc tttccatagg ttcctagcta agctgaccaa
      121 ggtggagcaa aaggcccctc cccccaaaat aaagctctgg gattggagtt tgagctcagc
      181 ctcccggatg gggccggaat ttacctttgt actccaggga ggcctgggtt ggtgtgcctg
      241 gctgggtgtg tccagaactg gctgccatcc tgaccgtgtc ccagagctgc tggcagatgg
      301 gaattcagta tcagtcacca gacccaaggc cttactggct gccctgcttt tcgtaggttc
      361 tatgagcagc caccatggcc tctgggctgg cagaagagtc tgaactgagt cctggggagt
      421 ctgagctggc tgtgaacccc tttgatgggc tccccttctc ctcctgctac tatgagctgc
      481 ttgagcagcg tagagccctg cccatctggg ctgctcgctt cctgttcttg gagcatttgg
      541 agagtagccc cactggagtg gtgctggtat ctggggaccc tggctctggc aagagcaccc
      601 agattcctca gtggtgtgca gagtttgcgc tggccagagg attccagaca ggacaggtta
      661 cagtcactca gccctaccct ctggcagcca tgagcctggc ttcaagggtg gctgatgaga
      721 tggacctgac cctgggtcat gagattggat acagcatccc tcaggaagac tgtactgggc
      781 ccaacaccat gctcaggttt tgctgggaca ggctatttct gcaggaagta gcctcaaccc
      841 ggggccctgg agcctggagt gtgctgatac tggatgaggc tcaggagcgg tcagtggcct
      901 cagatttact acaggggctc ttgagagata ccagactgag aaacctgcca ggggatccca
      961 gagtggttgt agttaccgac ccagcgcttg aaccaaaatt ccaggctttc tggggcaatt
     1021 ctcccattgt gcgtgtgccc agggagcctg gtggagatcc cacccttgcc tacaaggaca
     1081 ctgtccctac cgacctggtg gaagctgcct gccaagctgt gcttgagctg tgtcagcagg
     1141 aagaggcacc aggagatgtg ctggtgtatc tgcccagcga agaggaaatt tctctgtgct
     1201 gtgaatcctt gtctggggag atgggaacgc tggctgtccc agggcctcca ccgcgggtgc
     1261 taccccttca ccctggctgt gctcaagcca tccagacagt gtatgaagac acagacgtga
     1321 gtgttcgcaa aatcgtagtc actcattggc tggccgattt ctccttctcc cttccttcca
     1381 tccaacacgt cattgactca ggactggaac ttcgtagtgt ttacaatcct cggatccggg
     1441 cagaatccca ggtgttgaga ccaattagca agtgccaggc agaggcaaga ctgcttcggg
     1501 caaaggggtt cccaccagga tcctgcctcc gcctgtattc taaatccacc ctagaactag
     1561 aggctccccc actgccccac cccaaagtgt gtgaagagaa tctgagctct ctggtgttgc
     1621 tactaatgag gaaacagatt gcagagccag gggaatgcca cttcctggac cggcctgcac
     1681 cagaagcact gatgcgggcc ctggaagact tagactatct ggctgctctg aatgatgacg
     1741 gggagctgtc ggacctcgga gtgatcctgt cggagtttcc cctgcccccg gagctggcca
     1801 aagccctgct ggcctcctgc gagtttaact gtgtggatga aatgctcact ctggctgcca
     1861 tgctcactgc tgctcctggg tttacccggc ctccgctgag tgcgggagaa gctgccttgc
     1921 gccgggctct ggaacacgca gacggtgatc acagctctct gatccaggtc tatgaagcct
     1981 ttgtacaaag tggagcagat gaagcttggt gtcaggctcg gggtctaaac tgggagtcat
     2041 tatgtcaagc ccgtaaactc cgagcagagc ttgtggaact catgcaacgg attgagcttc
     2101 ctttgtccca gccagccttt ggctctgagc agaatcgcag agaccttcag aaagcactgc
     2161 tgtcaggata cttcctcaag gtggcccgag acacagatgg gacaggaaat tatctgcttc
     2221 tcacccataa acacgtagcc cagctgtctc catactgcag ctaccgaaac cgcaggactc
     2281 cagcccagcc acccacgtgg gtgctgtacc acagcttctc catctcgaaa gacaactgcc
     2341 tttgcattgt ctctgagatc cagcctgaga tgctggtgga gctcgcccct ccatacttcc
     2401 tgagtaactt gccccccagt gagagcagag acctcttgaa ccagctgaga gaaggaacag
     2461 cagagccacc agcagcagcg actgaaactt cctctcccca ggagtatgga gatggctgtg
     2521 ttctgcagtg agctaactgc ctaaggaatg gagccaaacc tcatcagaga gcgccaaggc
     2581 agtcagactt agagacccaa agtgtagggt cagatatact cctggaaccc aagagccaag
     2641 aactgttagg agtgggggaa gagagcgcca cagttcagaa caagcatact tttcttctct
     2701 gtccatggac atgggagcag atgccactca ccccacccat gcggcgcctc acacaacctt
     2761 gtctccttgg tgagactata aaagactttg gtggggggtg gagagatggc tcaggggtta
     2821 agagcactca ctgactgctc ttccagaggt catgagttca attcccagca accacatggt
     2881 ggctcatgac catctgtaat tggatccagt accctcttct ggtgtgtcag ctacagtgtg
     2941 ctcatataca ttaaataaat aaatcttttt tttttttttt tttttttttg gttttacgag
     3001 acagggtttc tctgtgtagc cctggctgtc ctggaactca ctctgtagac caggttagcc
     3061 tcgaactcag aaattcacct gcctctgcct cccaagtgct gggattaaag gcatgtgcca
     3121 ccatgcccat ctaaataaat ctttttttta aaaaatga
//
